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The map label for this gene is cheD

Identifier: 78044303

GI number: 78044303

Start: 896056

End: 896535

Strand: Direct

Name: cheD

Synonym: CHY_1015

Alternate gene names: 78044303

Gene position: 896056-896535 (Clockwise)

Preceding gene: 78044159

Following gene: 78043373

Centisome position: 37.31

GC content: 47.71

Gene sequence:

>480_bases
ATGGAACTTCAGGTGGGAATTGCCGATTACAAGCTTGGCAGCAGTCCTGTCAAAATTGTTACTTACGGTTTGGGGTCCTG
TGTTGGGGTAAGTTTTTACGAACCGCGGTTAAAGTTGGGTGCCCTGTTACATATCATGCTTCCCGATAGTACCCAGTTTA
GCGGGAAACTTAAACCGGAAAAATTTGCCGATACCGGCATCCCTCTGGTGGTCAGGGAGTTAGAAAAGCAGGGGGCGAGA
AAAAGTTCACTGGAGGTTAAAATGGTGGGCGGAGCCCAGATGTTTTCGGGTCCCGGGGCTCAGACGGTCATGAATATTGG
CGAGAGAAACATTGAAATGTGCCGGAAGGTAATAGCACGGATGGGTCTAAAGTTAGTTGCGGAGGATGTTGGTGGGAATA
AGGGTAGGACGATGATCTTAGATACCGCTACCGGCAACGTTACGGTAAAAATAATTGGCAACATAGTAAAGGTGATATGA

Upstream 100 bases:

>100_bases
GGTATCTTCAAAGCAATGCCCGGGGGCTCAAAGTACAGGATGAGCTGCTAAGCAAGGCGGTAAATGATTTAGGAAAAGTA
CGGTAGGTTAAGAGAAAAAA

Downstream 100 bases:

>100_bases
TGAACTTTGCCGAATTTAAAGCAGAAGTTTATAAAAGATACGGAATTGACTTAAACCAGTACAAGGAAAATCAGGTACAA
AGGCGGCTCAATCTCTTTTT

Product: chemotaxis protein CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MELQVGIADYKLGSSPVKIVTYGLGSCVGVSFYEPRLKLGALLHIMLPDSTQFSGKLKPEKFADTGIPLVVRELEKQGAR
KSSLEVKMVGGAQMFSGPGAQTVMNIGERNIEMCRKVIARMGLKLVAEDVGGNKGRTMILDTATGNVTVKIIGNIVKVI

Sequences:

>Translated_159_residues
MELQVGIADYKLGSSPVKIVTYGLGSCVGVSFYEPRLKLGALLHIMLPDSTQFSGKLKPEKFADTGIPLVVRELEKQGAR
KSSLEVKMVGGAQMFSGPGAQTVMNIGERNIEMCRKVIARMGLKLVAEDVGGNKGRTMILDTATGNVTVKIIGNIVKVI
>Mature_159_residues
MELQVGIADYKLGSSPVKIVTYGLGSCVGVSFYEPRLKLGALLHIMLPDSTQFSGKLKPEKFADTGIPLVVRELEKQGAR
KSSLEVKMVGGAQMFSGPGAQTVMNIGERNIEMCRKVIARMGLKLVAEDVGGNKGRTMILDTATGNVTVKIIGNIVKVI

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CHED_CARHZ (Q3ADC2)

Other databases:

- EMBL:   CP000141
- RefSeq:   YP_359862.1
- HSSP:   Q9X005
- ProteinModelPortal:   Q3ADC2
- SMR:   Q3ADC2
- STRING:   Q3ADC2
- GeneID:   3727420
- GenomeReviews:   CP000141_GR
- KEGG:   chy:CHY_1015
- NMPDR:   fig|246194.3.peg.637
- TIGR:   CHY_1015
- eggNOG:   COG1871
- HOGENOM:   HBG531149
- OMA:   GGAAMFK
- ProtClustDB:   CLSK842017
- BioCyc:   CHYD246194:CHY_1015-MONOMER
- GO:   GO:0006935
- HAMAP:   MF_01440
- InterPro:   IPR005659

Pfam domain/function: PF03975 CheD

EC number: =3.5.1.44

Molecular weight: Translated: 17023; Mature: 17023

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELQVGIADYKLGSSPVKIVTYGLGSCVGVSFYEPRLKLGALLHIMLPDSTQFSGKLKPE
CEEEEECCCEECCCCCEEEEEECCCCCEECEECCCHHHCCEEEEEEECCCCCCCCCCCCH
KFADTGIPLVVRELEKQGARKSSLEVKMVGGAQMFSGPGAQTVMNIGERNIEMCRKVIAR
HHCCCCCHHHHHHHHHCCCCCCCCEEEEECCCEEECCCCHHHHHHCCCCCHHHHHHHHHH
MGLKLVAEDVGGNKGRTMILDTATGNVTVKIIGNIVKVI
CCHHEEHHHCCCCCCCEEEEEECCCCEEEEEEHHHHHCC
>Mature Secondary Structure
MELQVGIADYKLGSSPVKIVTYGLGSCVGVSFYEPRLKLGALLHIMLPDSTQFSGKLKPE
CEEEEECCCEECCCCCEEEEEECCCCCEECEECCCHHHCCEEEEEEECCCCCCCCCCCCH
KFADTGIPLVVRELEKQGARKSSLEVKMVGGAQMFSGPGAQTVMNIGERNIEMCRKVIAR
HHCCCCCHHHHHHHHHCCCCCCCCEEEEECCCEEECCCCHHHHHHCCCCCHHHHHHHHHH
MGLKLVAEDVGGNKGRTMILDTATGNVTVKIIGNIVKVI
CCHHEEHHHCCCCCCCEEEEEECCCCEEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA