Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
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Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is flgG [H]
Identifier: 78044159
GI number: 78044159
Start: 895307
End: 896041
Strand: Direct
Name: flgG [H]
Synonym: CHY_1014
Alternate gene names: 78044159
Gene position: 895307-896041 (Clockwise)
Preceding gene: 78044674
Following gene: 78044303
Centisome position: 37.28
GC content: 46.39
Gene sequence:
>735_bases ATGCTAAGGGGCATTTATATTTCTGCTACTGGCCTGAAAGCAGGACTTAAACAGTTAGATACCGTTGCCAACAACATAGC CAACATCAATACCGTTGGGTACCGGGCCGATATAACGGTCAATTCCGGTTTTGAGGAAAAGATACTTAATTATGCGGGTA AAGAGGTGGGGAAGTTAGAGTACGGGGTTAATCCCGATATAAATTATTTGGACCTGTCTTCCGGGAAGTATGTCCCTACC GGGCGGAATTTAGATTTTGCCCTGGTGGGAAACGGTTTTTTTGTGGTTGAAACACCTGCAGGCTTGAGATATACCCGGGC CGGCGATTTTCAGGTAAATAGGGACGGTTATCTGTGCTTGCCCAACGGCAGCAGAGTTTTGGGCGAAAAGGGACCGATTA AAATCGATAATGAAGAACTTTACGTGGAAAAAGACGGGCGGATTTACAATAAAGAACGCTCGCGGTATATTGACCGGTTG CGGGTTGTTGAGCCGGTGGATCCTGTGGCTTTGGAAAAAGTCGGAGGGAATTTTTTTGTAACTGCGGCCAACAACGTGCG TCCGGGTAATGCTTTGGTTTTGCAGGGCTATTTAGAGCAAAGCAATGTTGACCCCAATCGCGAATATCCAGCGTTGTTAG AAAGTTTAAGGTATCTTCAAAGCAATGCCCGGGGGCTCAAAGTACAGGATGAGCTGCTAAGCAAGGCGGTAAATGATTTA GGAAAAGTACGGTAG
Upstream 100 bases:
>100_bases TTGCCGCAGTGCTGGACATCTCCACATCCCGGGTTTCCCAGATAGCTTCAAAGGCTTTAGGGAAATTACGGAAATTGTTA AATGAAGGGGTTGGAGTTTA
Downstream 100 bases:
>100_bases GTTAAGAGAAAAAAATGGAACTTCAGGTGGGAATTGCCGATTACAAGCTTGGCAGCAGTCCTGTCAAAATTGTTACTTAC GGTTTGGGGTCCTGTGTTGG
Product: flagellar hook-basal body rod protein
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MLRGIYISATGLKAGLKQLDTVANNIANINTVGYRADITVNSGFEEKILNYAGKEVGKLEYGVNPDINYLDLSSGKYVPT GRNLDFALVGNGFFVVETPAGLRYTRAGDFQVNRDGYLCLPNGSRVLGEKGPIKIDNEELYVEKDGRIYNKERSRYIDRL RVVEPVDPVALEKVGGNFFVTAANNVRPGNALVLQGYLEQSNVDPNREYPALLESLRYLQSNARGLKVQDELLSKAVNDL GKVR
Sequences:
>Translated_244_residues MLRGIYISATGLKAGLKQLDTVANNIANINTVGYRADITVNSGFEEKILNYAGKEVGKLEYGVNPDINYLDLSSGKYVPT GRNLDFALVGNGFFVVETPAGLRYTRAGDFQVNRDGYLCLPNGSRVLGEKGPIKIDNEELYVEKDGRIYNKERSRYIDRL RVVEPVDPVALEKVGGNFFVTAANNVRPGNALVLQGYLEQSNVDPNREYPALLESLRYLQSNARGLKVQDELLSKAVNDL GKVR >Mature_244_residues MLRGIYISATGLKAGLKQLDTVANNIANINTVGYRADITVNSGFEEKILNYAGKEVGKLEYGVNPDINYLDLSSGKYVPT GRNLDFALVGNGFFVVETPAGLRYTRAGDFQVNRDGYLCLPNGSRVLGEKGPIKIDNEELYVEKDGRIYNKERSRYIDRL RVVEPVDPVALEKVGGNFFVTAANNVRPGNALVLQGYLEQSNVDPNREYPALLESLRYLQSNARGLKVQDELLSKAVNDL GKVR
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=259, Percent_Identity=26.2548262548263, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787317, Length=261, Percent_Identity=26.8199233716475, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 26980; Mature: 26980
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRGIYISATGLKAGLKQLDTVANNIANINTVGYRADITVNSGFEEKILNYAGKEVGKLE CCCEEEEEECCHHHHHHHHHHHHHHHCCCEECCEEEEEEECCCHHHHHHHHCCCHHCEEE YGVNPDINYLDLSSGKYVPTGRNLDFALVGNGFFVVETPAGLRYTRAGDFQVNRDGYLCL ECCCCCCCEEECCCCEECCCCCCEEEEEECCCEEEEECCCCCEEEECCCEEECCCCEEEC PNGSRVLGEKGPIKIDNEELYVEKDGRIYNKERSRYIDRLRVVEPVDPVALEKVGGNFFV CCCCEECCCCCCEEECCCEEEEECCCCEECHHHHHHHHHHHCCCCCCCHHHHHCCCCEEE TAANNVRPGNALVLQGYLEQSNVDPNREYPALLESLRYLQSNARGLKVQDELLSKAVNDL EECCCCCCCCEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHH GKVR HCCC >Mature Secondary Structure MLRGIYISATGLKAGLKQLDTVANNIANINTVGYRADITVNSGFEEKILNYAGKEVGKLE CCCEEEEEECCHHHHHHHHHHHHHHHCCCEECCEEEEEEECCCHHHHHHHHCCCHHCEEE YGVNPDINYLDLSSGKYVPTGRNLDFALVGNGFFVVETPAGLRYTRAGDFQVNRDGYLCL ECCCCCCCEEECCCCEECCCCCCEEEEEECCCEEEEECCCCCEEEECCCEEECCCCEEEC PNGSRVLGEKGPIKIDNEELYVEKDGRIYNKERSRYIDRLRVVEPVDPVALEKVGGNFFV CCCCEECCCCCCEEECCCEEEEECCCCEECHHHHHHHHHHHCCCCCCCHHHHHCCCCEEE TAANNVRPGNALVLQGYLEQSNVDPNREYPALLESLRYLQSNARGLKVQDELLSKAVNDL EECCCCCCCCEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHH GKVR HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1828465; 1905667; 9384377 [H]