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The map label for this gene is cooC1 [H]

Identifier: 78044249

GI number: 78044249

Start: 1083590

End: 1084354

Strand: Direct

Name: cooC1 [H]

Synonym: CHY_1220

Alternate gene names: 78044249

Gene position: 1083590-1084354 (Clockwise)

Preceding gene: 78043401

Following gene: 78042742

Centisome position: 45.12

GC content: 38.17

Gene sequence:

>765_bases
TTGAAGTTAGCGGTTGCAGGAAAAGGCGGAGTGGGAAAAACCACAGTGGCAGCAGGCTTAATAAAAATTATGGCTTCCGA
TTACGATAAGATTTATGCCGTTGACGGCGATCCAGATAGCTGTTTAGGGCAAACCTTGGGTCTGTCCATTGAAGAAGCTT
ATGCTATAACTCCTTTAATCGAAATGAAAGATGAAATAAGAGAAAAAACCGGGGATGGGGGGCTTTTAATCTTAAATCCT
AAGGTTGATGGTGATCTTGATAAGTACGGTCGTTATATTGATGACAAAATTTTCTTAATTCGCATGGGGGAAATAAAAAA
AGGTGGATCCCAATGCTACTGCCGGGAAAATTCTTTTTTGGGTTCAGTAGTAAGTGCGTTATTTTTGGATAAAAAAGAAG
CGGTTGTCATGGATATGGGAGCTGGTATTGAACACTTAACCCGGGGTACGGCCAAAGCGGTTGACATGATGATTGCGGTA
ATTGAACCAAATTTAAACAGCATTAAAACTGGCTTAAATATTGAAAAATTAGCGGGGGATTTGGGCATAAAAAAGGTGCG
CTATGTGATTAACAAAGTTAGGAATATTAAGGAAGAAAAACTTATTAAAAAGCATTTGCCTGAAGATAAGATTCTGGGCA
TTATACCGTATAATGAACTATTTATAGAACTTTCATTAAAAGGCGAAGAGATTTGGCAGTCTACAAATCCGGCTTTTGTA
AATCTTCATGACATATACCAAAAATTGCGTTTGGAGGTGGGATAA

Upstream 100 bases:

>100_bases
TTTTTATGTAAATTTGAAAAACATTTTCCGTGAGTGGTAGGAAAATTAAGTTAAATGGTCGAATATTTAAGTTAAACGAC
GGTCAGTGGAGGGGAAAAAG

Downstream 100 bases:

>100_bases
CCAAAACAAGAGGGGGTGCTTTTAAGATTTACTTAAAAATATTTAAAAAGGAGGTTATTAAATGCCAAGGTTTAGAGATT
TAGAGCATACCTCAAAACCT

Product: CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDPDSCLGQTLGLSIEEAYAITPLIEMKDEIREKTGDGGLLILNP
KVDGDLDKYGRYIDDKIFLIRMGEIKKGGSQCYCRENSFLGSVVSALFLDKKEAVVMDMGAGIEHLTRGTAKAVDMMIAV
IEPNLNSIKTGLNIEKLAGDLGIKKVRYVINKVRNIKEEKLIKKHLPEDKILGIIPYNELFIELSLKGEEIWQSTNPAFV
NLHDIYQKLRLEVG

Sequences:

>Translated_254_residues
MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDPDSCLGQTLGLSIEEAYAITPLIEMKDEIREKTGDGGLLILNP
KVDGDLDKYGRYIDDKIFLIRMGEIKKGGSQCYCRENSFLGSVVSALFLDKKEAVVMDMGAGIEHLTRGTAKAVDMMIAV
IEPNLNSIKTGLNIEKLAGDLGIKKVRYVINKVRNIKEEKLIKKHLPEDKILGIIPYNELFIELSLKGEEIWQSTNPAFV
NLHDIYQKLRLEVG
>Mature_254_residues
MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDPDSCLGQTLGLSIEEAYAITPLIEMKDEIREKTGDGGLLILNP
KVDGDLDKYGRYIDDKIFLIRMGEIKKGGSQCYCRENSFLGSVVSALFLDKKEAVVMDMGAGIEHLTRGTAKAVDMMIAV
IEPNLNSIKTGLNIEKLAGDLGIKKVRYVINKVRNIKEEKLIKKHLPEDKILGIIPYNELFIELSLKGEEIWQSTNPAFV
NLHDIYQKLRLEVG

Specific function: Involved in the insertion of nickel into the carbon monoxide dehydrogenase (CODH) [H]

COG id: COG3640

COG function: function code D; CO dehydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR014433 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27959; Mature: 27959

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDPDSCLGQTLGLSIEEAYAITPLI
CEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHH
EMKDEIREKTGDGGLLILNPKVDGDLDKYGRYIDDKIFLIRMGEIKKGGSQCYCRENSFL
HHHHHHHHCCCCCCEEEECCCCCCCHHHHCHHCCCEEEEEEECCCCCCCCEEEEECCCHH
GSVVSALFLDKKEAVVMDMGAGIEHLTRGTAKAVDMMIAVIEPNLNSIKTGLNIEKLAGD
HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHEEECCCHHHHHCCCCHHHHHHH
LGIKKVRYVINKVRNIKEEKLIKKHLPEDKILGIIPYNELFIELSLKGEEIWQSTNPAFV
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCEEEEEEEECHHHHHCCCCCCEE
NLHDIYQKLRLEVG
EHHHHHHHHHHCCC
>Mature Secondary Structure
MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDPDSCLGQTLGLSIEEAYAITPLI
CEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHH
EMKDEIREKTGDGGLLILNPKVDGDLDKYGRYIDDKIFLIRMGEIKKGGSQCYCRENSFL
HHHHHHHHCCCCCCEEEECCCCCCCHHHHCHHCCCEEEEEEECCCCCCCCEEEEECCCHH
GSVVSALFLDKKEAVVMDMGAGIEHLTRGTAKAVDMMIAVIEPNLNSIKTGLNIEKLAGD
HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHEEECCCHHHHHCCCCHHHHHHH
LGIKKVRYVINKVRNIKEEKLIKKHLPEDKILGIIPYNELFIELSLKGEEIWQSTNPAFV
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCEEEEEEEECHHHHHCCCCCCEE
NLHDIYQKLRLEVG
EHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9079911; 1644755 [H]