Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
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Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is 78043401
Identifier: 78043401
GI number: 78043401
Start: 1082402
End: 1083391
Strand: Direct
Name: 78043401
Synonym: CHY_1219
Alternate gene names: NA
Gene position: 1082402-1083391 (Clockwise)
Preceding gene: 78042727
Following gene: 78044249
Centisome position: 45.07
GC content: 31.52
Gene sequence:
>990_bases ATGTTAAAAAAATTTTTTAAAGTAATAATTATTTTTCTTATTTTAAATTCTCTTGCTTATGCCGAACAGTTAAAATCTAC CGAAGGAACATCTGCGAGCACCTCGAAATTTGTATTAATTTTTATTGAAGATTTTAATCGCGAGAAACTTTATCAAATTT ACCTTCCAAACTTAGTTAATCTTTACGAAATGGGATATAGCGGTGTAATTGAAGGTCAAGATTTGGCTTTTCAACAAACA ATTGAACGGGTATTAAAATTAAAAGGTTTTGCAACGAATTTCCCTATTTTGGCTGAAAAGTACGGTTATAAGGTTTATGG GTATGGATTTAATTTAAAAAATTATTCCGGGTTTAAATACCTGCCTAATTTAAGTTATTTTGAAGCAAAGCTCGGTTCAA AGGAAAAATACGGGTTTATTCTTGCTTTTAAAAAAGGTCAAGAAAAATTAGCTGATAAAATCATAGAAAAGCTTTATGAA ACAGGAAGTCTCCAAAATACAGTTGTTGCCATAATTGGAAGCGGCAATGAAGGGGTTTTTGGTGTATTTGCCCAAAAACT TAAAAAGAATGTACGGGCAGAAATCCTTGTGGATGATGGAATAATATCGATAATTTCTTTAGCTTTAGGTATTTATCCGC AGGAGGAATGGGGTCCAGTTTTATGGAGTGCAATCTATACCGGAGACTGGGAAAAGGATAACCAAAATAGGATTAAAGAG CAAAAAGAAATTTTAACCTATGTTTTAAAGCTTCGGCAGTCGCTAAAGGGTAAAGATTTAGAAATTGCAAAATATTCTTT AGAAAAAGAGAAACTTTTAACAAAATTAGCGGTGAAAAACGCTGAAAACCGGCGTTTAACCGGTGTAATAAAAAGGTTGA ATAGGTTAATTTCAGCACTAAAACTTTTAACTTTACTCATCTTTGTAACCGGAGTATTAGCGCTTTTCCTTGAATATAAA TTCTTAAAAAAGAAATATCTGCTATTTTAA
Upstream 100 bases:
>100_bases ACCGGTGGGTACATTTTATGGAAAAAGCATCTGCTTTAGCATAGATTGTCCTCTTAGGGCATATTTTTTTTTAGAATAAA CCCTAAGGGGGTAAGGGAGA
Downstream 100 bases:
>100_bases ATCCGGTAAAGGGTTGTTTTTTAATGTTATAAAAATCACAAATAATTCAGAAAATTTTATATATTATAAGCAGGAATTTT AAGTAGAATGTCGAAAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MLKKFFKVIIIFLILNSLAYAEQLKSTEGTSASTSKFVLIFIEDFNREKLYQIYLPNLVNLYEMGYSGVIEGQDLAFQQT IERVLKLKGFATNFPILAEKYGYKVYGYGFNLKNYSGFKYLPNLSYFEAKLGSKEKYGFILAFKKGQEKLADKIIEKLYE TGSLQNTVVAIIGSGNEGVFGVFAQKLKKNVRAEILVDDGIISIISLALGIYPQEEWGPVLWSAIYTGDWEKDNQNRIKE QKEILTYVLKLRQSLKGKDLEIAKYSLEKEKLLTKLAVKNAENRRLTGVIKRLNRLISALKLLTLLIFVTGVLALFLEYK FLKKKYLLF
Sequences:
>Translated_329_residues MLKKFFKVIIIFLILNSLAYAEQLKSTEGTSASTSKFVLIFIEDFNREKLYQIYLPNLVNLYEMGYSGVIEGQDLAFQQT IERVLKLKGFATNFPILAEKYGYKVYGYGFNLKNYSGFKYLPNLSYFEAKLGSKEKYGFILAFKKGQEKLADKIIEKLYE TGSLQNTVVAIIGSGNEGVFGVFAQKLKKNVRAEILVDDGIISIISLALGIYPQEEWGPVLWSAIYTGDWEKDNQNRIKE QKEILTYVLKLRQSLKGKDLEIAKYSLEKEKLLTKLAVKNAENRRLTGVIKRLNRLISALKLLTLLIFVTGVLALFLEYK FLKKKYLLF >Mature_329_residues MLKKFFKVIIIFLILNSLAYAEQLKSTEGTSASTSKFVLIFIEDFNREKLYQIYLPNLVNLYEMGYSGVIEGQDLAFQQT IERVLKLKGFATNFPILAEKYGYKVYGYGFNLKNYSGFKYLPNLSYFEAKLGSKEKYGFILAFKKGQEKLADKIIEKLYE TGSLQNTVVAIIGSGNEGVFGVFAQKLKKNVRAEILVDDGIISIISLALGIYPQEEWGPVLWSAIYTGDWEKDNQNRIKE QKEILTYVLKLRQSLKGKDLEIAKYSLEKEKLLTKLAVKNAENRRLTGVIKRLNRLISALKLLTLLIFVTGVLALFLEYK FLKKKYLLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37702; Mature: 37702
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKFFKVIIIFLILNSLAYAEQLKSTEGTSASTSKFVLIFIEDFNREKLYQIYLPNLVN CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEECCCHHHH LYEMGYSGVIEGQDLAFQQTIERVLKLKGFATNFPILAEKYGYKVYGYGFNLKNYSGFKY HHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEECCCCCCCCCC LPNLSYFEAKLGSKEKYGFILAFKKGQEKLADKIIEKLYETGSLQNTVVAIIGSGNEGVF CCCCHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHH GVFAQKLKKNVRAEILVDDGIISIISLALGIYPQEEWGPVLWSAIYTGDWEKDNQNRIKE HHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCHHHCHHHHHHHHCCCCCCCCHHHHHH QKEILTYVLKLRQSLKGKDLEIAKYSLEKEKLLTKLAVKNAENRRLTGVIKRLNRLISAL HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KLLTLLIFVTGVLALFLEYKFLKKKYLLF HHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLKKFFKVIIIFLILNSLAYAEQLKSTEGTSASTSKFVLIFIEDFNREKLYQIYLPNLVN CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEECCCHHHH LYEMGYSGVIEGQDLAFQQTIERVLKLKGFATNFPILAEKYGYKVYGYGFNLKNYSGFKY HHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEECCCCCCCCCC LPNLSYFEAKLGSKEKYGFILAFKKGQEKLADKIIEKLYETGSLQNTVVAIIGSGNEGVF CCCCHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHH GVFAQKLKKNVRAEILVDDGIISIISLALGIYPQEEWGPVLWSAIYTGDWEKDNQNRIKE HHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCHHHCHHHHHHHHCCCCCCCCHHHHHH QKEILTYVLKLRQSLKGKDLEIAKYSLEKEKLLTKLAVKNAENRRLTGVIKRLNRLISAL HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KLLTLLIFVTGVLALFLEYKFLKKKYLLF HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA