Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
---|---|
Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is exeA [H]
Identifier: 78044232
GI number: 78044232
Start: 1114703
End: 1115506
Strand: Direct
Name: exeA [H]
Synonym: CHY_2643
Alternate gene names: 78044232
Gene position: 1114703-1115506 (Clockwise)
Preceding gene: 78045016
Following gene: 78042973
Centisome position: 46.42
GC content: 45.9
Gene sequence:
>804_bases ATGTTTGAACACTTTTTTGGTTTTCACCGCACCCCCTTCGGGAGGGATCTGCCGGTAAACTCTTTGTTTACCACTCCTGC CCATGAAGAGCTGGTATCCAGGCTTAAATATGCAGCGGAAAAACGCCTCTTTGCCCTAATTACCGGCGAAGTAGGAGCAG GTAAGTCCACAGCATTACGGCAACTATTATCGCTATTAAACCCCAATAAGTACCGGGTTATTTATATTAGCGATTCTGGT CTAACTCCCAGGCATTTTTACTGGGAAGCCCTGCGGCAGCTTGACTGTGAGCCACGCTTTAACCGGGGACAGGCTAAACG TCAGCTGCATCAGGTTATCCTTGACTTAGCAGAAAATCAACAGAAAATACCGGTAGTTATTGTGGATGAAGCTCATCTCC TTGACCGGGAAATGCTTGAAGAAATACGCTTTCTTTTGAATTTTCGCATGGATTCGTATAATCCAATGAGTCTAATTCTG GTAGGTCAGCCAGAACTGCGCCGTATCTTACAACTTCAGGTTTATGAAGCTATTGCTCAGAGGATTAACCTTCGCTACCA CCTTCCGCCCATGGAACGGGAGGAAGCAAAAGGCTATGTGGCCCACCATCTCAGGACAGCCGGGGCAAGTTCAGCAATTT TTACCGATGATGCCTTGGATATGGTCTATGAGTATGCTGGGGGTATTGCCCGGAAAATCAATAACCTGTGCATTGCTTGT CTAATGGCAGCTGCAGCCGAACAGAAACGGCTTATTGATGACCGTATGGTCAAGGTAGTAATTGAAAATGAATTTTCTGT ATAA
Upstream 100 bases:
>100_bases CTTCCCGCCTCTTAACAGTACTTGAAGAAAGAAGTATTGAACGCCGCCGGCGAAAATTAGGGGCCATACCCTTCCGCCAG CTGGAAGGGGGTAAGTAAAA
Downstream 100 bases:
>100_bases AATTATGTCAATGGCCAGGCAGTATAAAAAACTGCCTGGCCAAATAAAGTGAGCAATATTTGCGGCCACTTAATTTGAGC TAAATGTGGTCAATTAGTGT
Product: ISChy3, orf3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MFEHFFGFHRTPFGRDLPVNSLFTTPAHEELVSRLKYAAEKRLFALITGEVGAGKSTALRQLLSLLNPNKYRVIYISDSG LTPRHFYWEALRQLDCEPRFNRGQAKRQLHQVILDLAENQQKIPVVIVDEAHLLDREMLEEIRFLLNFRMDSYNPMSLIL VGQPELRRILQLQVYEAIAQRINLRYHLPPMEREEAKGYVAHHLRTAGASSAIFTDDALDMVYEYAGGIARKINNLCIAC LMAAAAEQKRLIDDRMVKVVIENEFSV
Sequences:
>Translated_267_residues MFEHFFGFHRTPFGRDLPVNSLFTTPAHEELVSRLKYAAEKRLFALITGEVGAGKSTALRQLLSLLNPNKYRVIYISDSG LTPRHFYWEALRQLDCEPRFNRGQAKRQLHQVILDLAENQQKIPVVIVDEAHLLDREMLEEIRFLLNFRMDSYNPMSLIL VGQPELRRILQLQVYEAIAQRINLRYHLPPMEREEAKGYVAHHLRTAGASSAIFTDDALDMVYEYAGGIARKINNLCIAC LMAAAAEQKRLIDDRMVKVVIENEFSV >Mature_267_residues MFEHFFGFHRTPFGRDLPVNSLFTTPAHEELVSRLKYAAEKRLFALITGEVGAGKSTALRQLLSLLNPNKYRVIYISDSG LTPRHFYWEALRQLDCEPRFNRGQAKRQLHQVILDLAENQQKIPVVIVDEAHLLDREMLEEIRFLLNFRMDSYNPMSLIL VGQPELRRILQLQVYEAIAQRINLRYHLPPMEREEAKGYVAHHLRTAGASSAIFTDDALDMVYEYAGGIARKINNLCIAC LMAAAAEQKRLIDDRMVKVVIENEFSV
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 30756; Mature: 30756
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEHFFGFHRTPFGRDLPVNSLFTTPAHEELVSRLKYAAEKRLFALITGEVGAGKSTALR CCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHH QLLSLLNPNKYRVIYISDSGLTPRHFYWEALRQLDCEPRFNRGQAKRQLHQVILDLAENQ HHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC QKIPVVIVDEAHLLDREMLEEIRFLLNFRMDSYNPMSLILVGQPELRRILQLQVYEAIAQ CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH RINLRYHLPPMEREEAKGYVAHHLRTAGASSAIFTDDALDMVYEYAGGIARKINNLCIAC HCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHH LMAAAAEQKRLIDDRMVKVVIENEFSV HHHHHHHHHHHHHHHHHHHEECCCCCC >Mature Secondary Structure MFEHFFGFHRTPFGRDLPVNSLFTTPAHEELVSRLKYAAEKRLFALITGEVGAGKSTALR CCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHH QLLSLLNPNKYRVIYISDSGLTPRHFYWEALRQLDCEPRFNRGQAKRQLHQVILDLAENQ HHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC QKIPVVIVDEAHLLDREMLEEIRFLLNFRMDSYNPMSLILVGQPELRRILQLQVYEAIAQ CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH RINLRYHLPPMEREEAKGYVAHHLRTAGASSAIFTDDALDMVYEYAGGIARKINNLCIAC HCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHH LMAAAAEQKRLIDDRMVKVVIENEFSV HHHHHHHHHHHHHHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]