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The map label for this gene is ytxE [H]

Identifier: 78043824

GI number: 78043824

Start: 853518

End: 854318

Strand: Direct

Name: ytxE [H]

Synonym: CHY_0964

Alternate gene names: 78043824

Gene position: 853518-854318 (Clockwise)

Preceding gene: 78043109

Following gene: 78043972

Centisome position: 35.54

GC content: 45.44

Gene sequence:

>801_bases
ATGAAGCGGCGTCAGCATGAGGAAAAAAAACCAAACCACGAACGCTGGCTTATTACTTATGCGGATATGATTACTTTATT
GATGGTTTTTTTTATCGTTATGTATGCCCTTTCCAATGTTGATGCCAATAAATTTCGGGCTTTAGCCGAATCTTTAAGTA
AAGCTCTTGGCGGGGGAGGAATTGTGCTTACCAATGCCGGACCGGATGTGGTTACCGGGAGCAATGCAACTGTACAGGGC
AACCTGGGAAAAGCCAGCCAGGAGCAATTACCGGCGGTTGATGAAAAGGATTTGAAGGAAACGGCTAATTTAGCGCTAAT
TAAGGCTAAAGTTGATTCTTACATAAAAGCGAAAGGTTTAAATGCCAGTGTGACGGCTACCTTAGAAGAAAGGGGTGTGG
TTATCTCCTTTAAAGATGCCATTTTATTTAAATTGGGTTCGGCGGAGCTTACGCCTCAGGCAAAGGCTATTGTGCGGCAA
ATTGGTGAAATTTTGTTGCCACTTCCGAACTATATCCGCATCGAGGGGCACACCGACAACCTACCGATAAACACCAGTCG
ATTTCCGTCCAACTGGGAACTTTCCACGGCCCGGGCAACTTCGGTTGTCCATGAATTAATTGATGGGCTTCATTTTCCGC
CCTATCGTTTATCGGCAGTAGGATACGGAGAATATCGCCCTAAAGTTCCCAATACTTCAGAGCAAAACCGGCAGAAGAAC
CGACGGGTGGATATTGTCATTTTGAGGAGCAAGTATGAACCGGTAGAGCCAAAAAGCGGGAAAGTACCCGGACAAAATTA
A

Upstream 100 bases:

>100_bases
CAGGAAGGACATAACCCGATGCTGATTGAAGAAAAACTCCGGTCATTCTTAAAGCCTAAACTCCGGGAGCAAAGCTTAAG
AGAAGGTAAGGGTGAATTAA

Downstream 100 bases:

>100_bases
AGGGGGAGAATTAATGGGGGGATTTAAACTGCGTTTGGGTATCAGGGCCAAGCTGTTTATCCTAACTTTTATTCTGGCTT
CGATGATGGTGATTGGGGGA

Product: flagellar motor protein MotB

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MKRRQHEEKKPNHERWLITYADMITLLMVFFIVMYALSNVDANKFRALAESLSKALGGGGIVLTNAGPDVVTGSNATVQG
NLGKASQEQLPAVDEKDLKETANLALIKAKVDSYIKAKGLNASVTATLEERGVVISFKDAILFKLGSAELTPQAKAIVRQ
IGEILLPLPNYIRIEGHTDNLPINTSRFPSNWELSTARATSVVHELIDGLHFPPYRLSAVGYGEYRPKVPNTSEQNRQKN
RRVDIVILRSKYEPVEPKSGKVPGQN

Sequences:

>Translated_266_residues
MKRRQHEEKKPNHERWLITYADMITLLMVFFIVMYALSNVDANKFRALAESLSKALGGGGIVLTNAGPDVVTGSNATVQG
NLGKASQEQLPAVDEKDLKETANLALIKAKVDSYIKAKGLNASVTATLEERGVVISFKDAILFKLGSAELTPQAKAIVRQ
IGEILLPLPNYIRIEGHTDNLPINTSRFPSNWELSTARATSVVHELIDGLHFPPYRLSAVGYGEYRPKVPNTSEQNRQKN
RRVDIVILRSKYEPVEPKSGKVPGQN
>Mature_266_residues
MKRRQHEEKKPNHERWLITYADMITLLMVFFIVMYALSNVDANKFRALAESLSKALGGGGIVLTNAGPDVVTGSNATVQG
NLGKASQEQLPAVDEKDLKETANLALIKAKVDSYIKAKGLNASVTATLEERGVVISFKDAILFKLGSAELTPQAKAIVRQ
IGEILLPLPNYIRIEGHTDNLPINTSRFPSNWELSTARATSVVHELIDGLHFPPYRLSAVGYGEYRPKVPNTSEQNRQKN
RRVDIVILRSKYEPVEPKSGKVPGQN

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=223, Percent_Identity=30.9417040358744, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 29372; Mature: 29372

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRQHEEKKPNHERWLITYADMITLLMVFFIVMYALSNVDANKFRALAESLSKALGGGG
CCCCCCHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
IVLTNAGPDVVTGSNATVQGNLGKASQEQLPAVDEKDLKETANLALIKAKVDSYIKAKGL
EEEECCCCCEEECCCCEEECCCCCCCHHHCCCCCHHHHHHHHCEEEEEEHHHHHHHHCCC
NASVTATLEERGVVISFKDAILFKLGSAELTPQAKAIVRQIGEILLPLPNYIRIEGHTDN
CCEEEEEHHHCCEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC
LPINTSRFPSNWELSTARATSVVHELIDGLHFPPYRLSAVGYGEYRPKVPNTSEQNRQKN
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHC
RRVDIVILRSKYEPVEPKSGKVPGQN
CCEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRRQHEEKKPNHERWLITYADMITLLMVFFIVMYALSNVDANKFRALAESLSKALGGGG
CCCCCCHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
IVLTNAGPDVVTGSNATVQGNLGKASQEQLPAVDEKDLKETANLALIKAKVDSYIKAKGL
EEEECCCCCEEECCCCEEECCCCCCCHHHCCCCCHHHHHHHHCEEEEEEHHHHHHHHCCC
NASVTATLEERGVVISFKDAILFKLGSAELTPQAKAIVRQIGEILLPLPNYIRIEGHTDN
CCEEEEEHHHCCEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC
LPINTSRFPSNWELSTARATSVVHELIDGLHFPPYRLSAVGYGEYRPKVPNTSEQNRQKN
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHC
RRVDIVILRSKYEPVEPKSGKVPGQN
CCEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]