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The map label for this gene is trg [C]

Identifier: 78043972

GI number: 78043972

Start: 854332

End: 855900

Strand: Direct

Name: trg [C]

Synonym: CHY_0965

Alternate gene names: 78043972

Gene position: 854332-855900 (Clockwise)

Preceding gene: 78043824

Following gene: 78044727

Centisome position: 35.57

GC content: 43.98

Gene sequence:

>1569_bases
ATGGGGGGATTTAAACTGCGTTTGGGTATCAGGGCCAAGCTGTTTATCCTAACTTTTATTCTGGCTTCGATGATGGTGAT
TGGGGGAACCGGTGCGGTCTTTTCTACGTACCTGGTAAACCGGAGCCATGAAAAGCAAAATAAAGAACTTTTAGGGGAAC
TCCAGCGGTTGGGGGAATTAAAAACGTCCCTTTTTCAATATTTCAATACTGCTAACGATTTTTTGCTTTTTCCCAACTCC
CAAAGATTAGTAGAGGTGCAAAAAACCTATCAGGAACTAAAGAATCTTTTAACAAATGCCAGAAAACTGGCTCATAGCAG
CGAAGAAACGCAACAATATGATGAAATTGCAGCTATTTTAAATAAATCCCAAAATTTATTAGAAAAAAATGCCACTAATC
CCAATTTCGAACAAACCCAGAACGCCATGAATATGCTCCAAACCAGTGCACGGAATATAATGCACCATTTAAACAAACTT
GAAGATACTGCTAAACAAGAAGATAACAAAGCCAGGGAAAAGCTTTTAAAAATCTTTAAAATTGCAGCCGGAGCCGTGGG
CGGCAGTACCGTTTTGGCGGCAATTTTAGCAATGATTATCGGTTACTTCATTACCAACCCGATTATTGTAGCGATTCAAA
AATTACGAGAAACGGTGCATAAGGTGGAAGAAGGCTGTCTTAATTGCACGGTGGATATCAAACAGGCCGATGAATTGGGA
GAACTGGCAACGGATTTAAATAATATGGTGGAAAAGCTAAACAGCTTGATTTCGACCATATCCACGGAACTCGAAAACTT
GTACGGGATTTCCGATCAGGTGGCTTCGGTGGCGGAGCAGGTCTCCAGGGGAGCAACGGAACAAGCGGCTCAGGTTCAGG
GAGCAACTACGGCAGTTGATGAGATCGTGCAGGGAATCCAGGAAGCTGCCAATCAAGCGGCCAATGCGGCCAGGGTTTCG
GAAGAAACCATGGCCCAGGCGCAAACCGGTGCCAAAACCGTAGACCAGTTAAGCGCCAGTATGGAAAAAATTAACCGGGA
GATCAAGCGTCTGGGAAGCAATATCTCCAGGATTACCGAGTTTTTGGCGGTTATTGAGGATATTGCCGAACAAACAAGCC
TTTTAGCCCTTAATGCGGCAATTGAAGCGGCTCGTGCCGGTGAACATGGTCGGGGATTTGCGGTAGTGGCGGAAAATGTT
AGAAAGCTTGCGGAACGTTCGGCAAAATCCACCAAAGAAATCGAACAACTGGTTTTTGAAATTCAAAAGAGCAGTCAGGA
GACCTTTGCGGCTATAAACGATGGCAATGAAATGGTGGGCAAAAATAAAGATGCTTTCAACCAGATTTTAAATGCGGTTA
ATTCGGTAGTGGCAATGATTGAAGAAATTGCAAAACATGGCAATGAAGTTGCTGAGCGCGCTAATCGCACCATGGAAATG
ATTAACTCTATTTCTGCAGTTATCCAGGAAACGGCGGCCACCACCGAAGAATTGGCGGCAACATCTCACACCCTGGTTGA
GACTTCCAATAAGATTAAGTCCCAGGTAGCGTATTTTAATACCAAATAA

Upstream 100 bases:

>100_bases
AAGAACCGACGGGTGGATATTGTCATTTTGAGGAGCAAGTATGAACCGGTAGAGCCAAAAAGCGGGAAAGTACCCGGACA
AAATTAAAGGGGGAGAATTA

Downstream 100 bases:

>100_bases
AAAGATGAGGAGGAGTTTTGAAGATGGCTGAAAATTTAACGAATAAAAGTGAGGCGCAAATTGTCATTTTTACCTTAAAC
CAGCAGCAGTACGGCGTTGA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 521

Protein sequence:

>522_residues
MGGFKLRLGIRAKLFILTFILASMMVIGGTGAVFSTYLVNRSHEKQNKELLGELQRLGELKTSLFQYFNTANDFLLFPNS
QRLVEVQKTYQELKNLLTNARKLAHSSEETQQYDEIAAILNKSQNLLEKNATNPNFEQTQNAMNMLQTSARNIMHHLNKL
EDTAKQEDNKAREKLLKIFKIAAGAVGGSTVLAAILAMIIGYFITNPIIVAIQKLRETVHKVEEGCLNCTVDIKQADELG
ELATDLNNMVEKLNSLISTISTELENLYGISDQVASVAEQVSRGATEQAAQVQGATTAVDEIVQGIQEAANQAANAARVS
EETMAQAQTGAKTVDQLSASMEKINREIKRLGSNISRITEFLAVIEDIAEQTSLLALNAAIEAARAGEHGRGFAVVAENV
RKLAERSAKSTKEIEQLVFEIQKSSQETFAAINDGNEMVGKNKDAFNQILNAVNSVVAMIEEIAKHGNEVAERANRTMEM
INSISAVIQETAATTEELAATSHTLVETSNKIKSQVAYFNTK

Sequences:

>Translated_522_residues
MGGFKLRLGIRAKLFILTFILASMMVIGGTGAVFSTYLVNRSHEKQNKELLGELQRLGELKTSLFQYFNTANDFLLFPNS
QRLVEVQKTYQELKNLLTNARKLAHSSEETQQYDEIAAILNKSQNLLEKNATNPNFEQTQNAMNMLQTSARNIMHHLNKL
EDTAKQEDNKAREKLLKIFKIAAGAVGGSTVLAAILAMIIGYFITNPIIVAIQKLRETVHKVEEGCLNCTVDIKQADELG
ELATDLNNMVEKLNSLISTISTELENLYGISDQVASVAEQVSRGATEQAAQVQGATTAVDEIVQGIQEAANQAANAARVS
EETMAQAQTGAKTVDQLSASMEKINREIKRLGSNISRITEFLAVIEDIAEQTSLLALNAAIEAARAGEHGRGFAVVAENV
RKLAERSAKSTKEIEQLVFEIQKSSQETFAAINDGNEMVGKNKDAFNQILNAVNSVVAMIEEIAKHGNEVAERANRTMEM
INSISAVIQETAATTEELAATSHTLVETSNKIKSQVAYFNTK
>Mature_521_residues
GGFKLRLGIRAKLFILTFILASMMVIGGTGAVFSTYLVNRSHEKQNKELLGELQRLGELKTSLFQYFNTANDFLLFPNSQ
RLVEVQKTYQELKNLLTNARKLAHSSEETQQYDEIAAILNKSQNLLEKNATNPNFEQTQNAMNMLQTSARNIMHHLNKLE
DTAKQEDNKAREKLLKIFKIAAGAVGGSTVLAAILAMIIGYFITNPIIVAIQKLRETVHKVEEGCLNCTVDIKQADELGE
LATDLNNMVEKLNSLISTISTELENLYGISDQVASVAEQVSRGATEQAAQVQGATTAVDEIVQGIQEAANQAANAARVSE
ETMAQAQTGAKTVDQLSASMEKINREIKRLGSNISRITEFLAVIEDIAEQTSLLALNAAIEAARAGEHGRGFAVVAENVR
KLAERSAKSTKEIEQLVFEIQKSSQETFAAINDGNEMVGKNKDAFNQILNAVNSVVAMIEEIAKHGNEVAERANRTMEMI
NSISAVIQETAATTEELAATSHTLVETSNKIKSQVAYFNTK

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=362, Percent_Identity=30.1104972375691, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI2367378, Length=391, Percent_Identity=26.5984654731458, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1788195, Length=292, Percent_Identity=28.7671232876712, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1788194, Length=436, Percent_Identity=26.3761467889908, Blast_Score=108, Evalue=9e-25,
Organism=Escherichia coli, GI1789453, Length=347, Percent_Identity=25.0720461095101, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57182; Mature: 57051

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGFKLRLGIRAKLFILTFILASMMVIGGTGAVFSTYLVNRSHEKQNKELLGELQRLGEL
CCCCEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
KTSLFQYFNTANDFLLFPNSQRLVEVQKTYQELKNLLTNARKLAHSSEETQQYDEIAAIL
HHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
NKSQNLLEKNATNPNFEQTQNAMNMLQTSARNIMHHLNKLEDTAKQEDNKAREKLLKIFK
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAAGAVGGSTVLAAILAMIIGYFITNPIIVAIQKLRETVHKVEEGCLNCTVDIKQADELG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHH
ELATDLNNMVEKLNSLISTISTELENLYGISDQVASVAEQVSRGATEQAAQVQGATTAVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCHHHHHH
EIVQGIQEAANQAANAARVSEETMAQAQTGAKTVDQLSASMEKINREIKRLGSNISRITE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
FLAVIEDIAEQTSLLALNAAIEAARAGEHGRGFAVVAENVRKLAERSAKSTKEIEQLVFE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQKSSQETFAAINDGNEMVGKNKDAFNQILNAVNSVVAMIEEIAKHGNEVAERANRTMEM
HHHCCHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INSISAVIQETAATTEELAATSHTLVETSNKIKSQVAYFNTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GGFKLRLGIRAKLFILTFILASMMVIGGTGAVFSTYLVNRSHEKQNKELLGELQRLGEL
CCCEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
KTSLFQYFNTANDFLLFPNSQRLVEVQKTYQELKNLLTNARKLAHSSEETQQYDEIAAIL
HHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
NKSQNLLEKNATNPNFEQTQNAMNMLQTSARNIMHHLNKLEDTAKQEDNKAREKLLKIFK
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAAGAVGGSTVLAAILAMIIGYFITNPIIVAIQKLRETVHKVEEGCLNCTVDIKQADELG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHH
ELATDLNNMVEKLNSLISTISTELENLYGISDQVASVAEQVSRGATEQAAQVQGATTAVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCHHHHHH
EIVQGIQEAANQAANAARVSEETMAQAQTGAKTVDQLSASMEKINREIKRLGSNISRITE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
FLAVIEDIAEQTSLLALNAAIEAARAGEHGRGFAVVAENVRKLAERSAKSTKEIEQLVFE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQKSSQETFAAINDGNEMVGKNKDAFNQILNAVNSVVAMIEEIAKHGNEVAERANRTMEM
HHHCCHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INSISAVIQETAATTEELAATSHTLVETSNKIKSQVAYFNTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA