Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
---|---|
Accession | NC_007503 |
Length | 2,401,520 |
Click here to switch to the map view.
The map label for this gene is arsR [C]
Identifier: 78043737
GI number: 78043737
Start: 967264
End: 967641
Strand: Direct
Name: arsR [C]
Synonym: CHY_1092
Alternate gene names: 78043737
Gene position: 967264-967641 (Clockwise)
Preceding gene: 78044810
Following gene: 78045129
Centisome position: 40.28
GC content: 39.68
Gene sequence:
>378_bases TTGGAGAAGCTTGTTAATATTTTAAAAGCTTTAGCTGACGCTCATCGACTTAGGCTTTTTTTGGAGTTAACCAAACGAGA AATGGGGGTGTGTGAGGCAATTTCTCTTTTGGGTTTATCCCAACCAGCGGTTTCGCACCATTTAAAAGTTTTAAAGCAAG CCGGGCTTATTAAAAACGAAAAACAGGGGAAAATTATTTTTTATTATGCTACTCCTGAGGCGGTGCAACTTTTGGAAAAG GAACTGGGAGGATTTTTGGGGAAGATTCGAAAATTACTGGAAACTCCGGTAAAACCTTCACCCCTTCGGGAACAACCGGA TTTATGCGAATTTTTAGGATTTAAAAAAGAAGTCTGTGAGGAAGGAGAGGAGTTATGA
Upstream 100 bases:
>100_bases CTACGACCTACCACTTTTTTATTGACAGGAAAATTTGTCCTATGTTAAACTACTTTCAAGATATATTTAAATATTTAAAT ATAAATTTGGAGGGAGTTTA
Downstream 100 bases:
>100_bases GCCAAACTTCTGCTAAATTATCGTTTGTAGACCGGTATTTAACCGTCTGGATTTTACTGGCAATGGTTTTGGGTGTTGCC ATTGGTTATTTCTTTCCCGG
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MEKLVNILKALADAHRLRLFLELTKREMGVCEAISLLGLSQPAVSHHLKVLKQAGLIKNEKQGKIIFYYATPEAVQLLEK ELGGFLGKIRKLLETPVKPSPLREQPDLCEFLGFKKEVCEEGEEL
Sequences:
>Translated_125_residues MEKLVNILKALADAHRLRLFLELTKREMGVCEAISLLGLSQPAVSHHLKVLKQAGLIKNEKQGKIIFYYATPEAVQLLEK ELGGFLGKIRKLLETPVKPSPLREQPDLCEFLGFKKEVCEEGEEL >Mature_125_residues MEKLVNILKALADAHRLRLFLELTKREMGVCEAISLLGLSQPAVSHHLKVLKQAGLIKNEKQGKIIFYYATPEAVQLLEK ELGGFLGKIRKLLETPVKPSPLREQPDLCEFLGFKKEVCEEGEEL
Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14096; Mature: 14096
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLVNILKALADAHRLRLFLELTKREMGVCEAISLLGLSQPAVSHHLKVLKQAGLIKNE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC KQGKIIFYYATPEAVQLLEKELGGFLGKIRKLLETPVKPSPLREQPDLCEFLGFKKEVCE CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHC EGEEL CCCCC >Mature Secondary Structure MEKLVNILKALADAHRLRLFLELTKREMGVCEAISLLGLSQPAVSHHLKVLKQAGLIKNE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC KQGKIIFYYATPEAVQLLEKELGGFLGKIRKLLETPVKPSPLREQPDLCEFLGFKKEVCE CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHC EGEEL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA