Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
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Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is yfbW [C]
Identifier: 78042665
GI number: 78042665
Start: 928671
End: 929111
Strand: Direct
Name: yfbW [C]
Synonym: CHY_1051
Alternate gene names: 78042665
Gene position: 928671-929111 (Clockwise)
Preceding gene: 78044615
Following gene: 78043457
Centisome position: 38.67
GC content: 34.92
Gene sequence:
>441_bases ATGGAAGGATGGGCTTTTAGCAATATGGACGCTTCTAAAGTACAGGATAAAAGATTAGCAAGGAGAATGGAGATGACAAA GTATATCTTGTTGCTGTTGGCAATTACTTTTATTAATGTTATTGGACAGTTTTTCATTAAAAAAGGTGTAAGTGGGCAAG AGCTATCTTTGGCTTCTTTAGCTGGGATAAAGTATTTCTTAACTCTATTTTTACAGCCATATATAATTTTTGGTTTTCTT TTCTATGCAGTTAGCTCGATATTGTGGATGTTTGTCCTTTCAAAGGTTGATTTGAGCTTAGCTTATCCTATGTTATCTTT TGGATATGTACTGGTTTTGGTGATATCCAAATTTTTTCTTCACGAGGCTGTTTCCCTTCAGAGGTGGATTGGGGTTTTCT TAATTTGTGGGGGAATGATTTTGCTAGCATGGAATAATTGA
Upstream 100 bases:
>100_bases AGCCTGAAATTACCGCAAAAATTTTAAAGCGGGGTGTAAAAATTTACGAGGTACCAATAAGTTATTTTCCCAGAAAAGCC GAAGAAGGTAAGAAGATAAA
Downstream 100 bases:
>100_bases TATTTTGGAGGATATTTATATGGATCAAGGTGAAATATGGAAAAATTTATCGAAAAATAGTGATATCTTCAATATGATTA ATTGTTACAAAAATCCATTA
Product: membrane protein
Products: NA
Alternate protein names: Multidrug Resistance Protein SMR Family; QuateRNAry Ammonium Compound-Resistance Protein; Small Multi-Drug Resistant Family Protein
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MEGWAFSNMDASKVQDKRLARRMEMTKYILLLLAITFINVIGQFFIKKGVSGQELSLASLAGIKYFLTLFLQPYIIFGFL FYAVSSILWMFVLSKVDLSLAYPMLSFGYVLVLVISKFFLHEAVSLQRWIGVFLICGGMILLAWNN
Sequences:
>Translated_146_residues MEGWAFSNMDASKVQDKRLARRMEMTKYILLLLAITFINVIGQFFIKKGVSGQELSLASLAGIKYFLTLFLQPYIIFGFL FYAVSSILWMFVLSKVDLSLAYPMLSFGYVLVLVISKFFLHEAVSLQRWIGVFLICGGMILLAWNN >Mature_146_residues MEGWAFSNMDASKVQDKRLARRMEMTKYILLLLAITFINVIGQFFIKKGVSGQELSLASLAGIKYFLTLFLQPYIIFGFL FYAVSSILWMFVLSKVDLSLAYPMLSFGYVLVLVISKFFLHEAVSLQRWIGVFLICGGMILLAWNN
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16671; Mature: 16671
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGWAFSNMDASKVQDKRLARRMEMTKYILLLLAITFINVIGQFFIKKGVSGQELSLASL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH AGIKYFLTLFLQPYIIFGFLFYAVSSILWMFVLSKVDLSLAYPMLSFGYVLVLVISKFFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HEAVSLQRWIGVFLICGGMILLAWNN HHHHHHHHHHHHHHHHCCHHEEEECC >Mature Secondary Structure MEGWAFSNMDASKVQDKRLARRMEMTKYILLLLAITFINVIGQFFIKKGVSGQELSLASL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH AGIKYFLTLFLQPYIIFGFLFYAVSSILWMFVLSKVDLSLAYPMLSFGYVLVLVISKFFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HEAVSLQRWIGVFLICGGMILLAWNN HHHHHHHHHHHHHHHHCCHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA