Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
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Accession | NC_007503 |
Length | 2,401,520 |
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The map label for this gene is 78043457
Identifier: 78043457
GI number: 78043457
Start: 929131
End: 929850
Strand: Direct
Name: 78043457
Synonym: CHY_1052
Alternate gene names: NA
Gene position: 929131-929850 (Clockwise)
Preceding gene: 78042665
Following gene: 78045223
Centisome position: 38.69
GC content: 25.69
Gene sequence:
>720_bases ATGGATCAAGGTGAAATATGGAAAAATTTATCGAAAAATAGTGATATCTTCAATATGATTAATTGTTACAAAAATCCATT AAACTTTCAACGAGAATTAGCTGAAATGATCAACCAACATTTTCTGAATAAAACAAAAGTGCTTGAAGTAGGTTGTGGTA CTGCAGCGACAAGTTATTTGCTAAATAATAATTTTAATATTACCGTTCTAGATTATAATGAAGATTTAATAAATAAGCTA AAAACTTTGTTTACGTATTACCTCAATAAAAATATTAATATTGTTTTGGGTGATATGTTTAATATGCCTTTTGAAGATAA AACATTTGATTTAGTTTTTAATTCAGGGGTAATGGAGCACTATAGATTTTCTGAACGAGTAGTTTTATTGAAAGAATATG CAAGGGTGTTAAAAGATGATGGTTTGATGATTATCGCTATTCCAAATCATTATGATTTTGCATATAGATTAGCTTATTTA GTAAGAAAAAGATTATTAAGAGGGAGAAATTGGCCATGGCCGGAAGAATACAAAATTTATGATTTAAAAAATGAAATAAA TGAAGCTAATTTAAGGCTTGTAAATAGGATAATTGTTGATAAGGAAACTAATTATAGCTTTATTGATAATATTTACATTA GAAAGATTATCGAGTTTGTTAATAAAAATTTTAATAAAACAAACGAAGGATATTTAACAGTACTAACGATATCAAAATAA
Upstream 100 bases:
>100_bases CACGAGGCTGTTTCCCTTCAGAGGTGGATTGGGGTTTTCTTAATTTGTGGGGGAATGATTTTGCTAGCATGGAATAATTG ATATTTTGGAGGATATTTAT
Downstream 100 bases:
>100_bases ATCAACTTACCTTTGATAAATCAATAAAACTTTTGCTTGTTCAATTTTGGGAATAAGTTTTAATATAAAAATGTTATCTT TGAATTGATAAGTTTTATGT
Product: hypothetical protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Galactosyltransferase-Related Protein
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MDQGEIWKNLSKNSDIFNMINCYKNPLNFQRELAEMINQHFLNKTKVLEVGCGTAATSYLLNNNFNITVLDYNEDLINKL KTLFTYYLNKNINIVLGDMFNMPFEDKTFDLVFNSGVMEHYRFSERVVLLKEYARVLKDDGLMIIAIPNHYDFAYRLAYL VRKRLLRGRNWPWPEEYKIYDLKNEINEANLRLVNRIIVDKETNYSFIDNIYIRKIIEFVNKNFNKTNEGYLTVLTISK
Sequences:
>Translated_239_residues MDQGEIWKNLSKNSDIFNMINCYKNPLNFQRELAEMINQHFLNKTKVLEVGCGTAATSYLLNNNFNITVLDYNEDLINKL KTLFTYYLNKNINIVLGDMFNMPFEDKTFDLVFNSGVMEHYRFSERVVLLKEYARVLKDDGLMIIAIPNHYDFAYRLAYL VRKRLLRGRNWPWPEEYKIYDLKNEINEANLRLVNRIIVDKETNYSFIDNIYIRKIIEFVNKNFNKTNEGYLTVLTISK >Mature_239_residues MDQGEIWKNLSKNSDIFNMINCYKNPLNFQRELAEMINQHFLNKTKVLEVGCGTAATSYLLNNNFNITVLDYNEDLINKL KTLFTYYLNKNINIVLGDMFNMPFEDKTFDLVFNSGVMEHYRFSERVVLLKEYARVLKDDGLMIIAIPNHYDFAYRLAYL VRKRLLRGRNWPWPEEYKIYDLKNEINEANLRLVNRIIVDKETNYSFIDNIYIRKIIEFVNKNFNKTNEGYLTVLTISK
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28466; Mature: 28466
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS00867 CPSASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQGEIWKNLSKNSDIFNMINCYKNPLNFQRELAEMINQHFLNKTKVLEVGCGTAATSYL CCCHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHE LNNNFNITVLDYNEDLINKLKTLFTYYLNKNINIVLGDMFNMPFEDKTFDLVFNSGVMEH ECCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCHHHH YRFSERVVLLKEYARVLKDDGLMIIAIPNHYDFAYRLAYLVRKRLLRGRNWPWPEEYKIY HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEE DLKNEINEANLRLVNRIIVDKETNYSFIDNIYIRKIIEFVNKNFNKTNEGYLTVLTISK EHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC >Mature Secondary Structure MDQGEIWKNLSKNSDIFNMINCYKNPLNFQRELAEMINQHFLNKTKVLEVGCGTAATSYL CCCHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHE LNNNFNITVLDYNEDLINKLKTLFTYYLNKNINIVLGDMFNMPFEDKTFDLVFNSGVMEH ECCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCHHHH YRFSERVVLLKEYARVLKDDGLMIIAIPNHYDFAYRLAYLVRKRLLRGRNWPWPEEYKIY HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEE DLKNEINEANLRLVNRIIVDKETNYSFIDNIYIRKIIEFVNKNFNKTNEGYLTVLTISK EHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA