Definition | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence. |
---|---|
Accession | NC_007494 |
Length | 943,016 |
Click here to switch to the map view.
The map label for this gene is 77465808
Identifier: 77465808
GI number: 77465808
Start: 924325
End: 925119
Strand: Reverse
Name: 77465808
Synonym: RSP_3804
Alternate gene names: NA
Gene position: 925119-924325 (Counterclockwise)
Preceding gene: 77465809
Following gene: 77465796
Centisome position: 98.1
GC content: 74.09
Gene sequence:
>795_bases ATGGCGGTGCTGCCCCGGATCATGCTGGCGCCGACCGGCGCGCGGCTCACCAAGGCCGATCATCCCGCCCTGCCGGTGAC GATCCCCGAGATCGTCGCGGCGGCCCGCGCCGGACGGGCGGCGGGGGCGGACGGGCTTCACGCCCATGTCCGCGATGCCG AGGGGCGGCATGTGCTCGATGCGGGCCTCTATGCCGAGCTTCTGGCAGAGCTCGACCGCGCAGCGCCGGGCTTTCCGGTT CAGGTCACGACCGAGGCGGTGGGGCGCTACACGCCGGCCGAGCAGCGGGCGCTGGTCGAGCGGCTGCGCCCGGCCTCGGT CTCGATCGCCTTCCGCGAGATCTCGGCCGAGCCCGATCCGCGCCTGACGCGCCGCTTCTTCGCCTTCTGCGCCGAGGCCG GCTGCCACGTCCAGCACATCCTCTACGACCTTACCGACGTGGCCGGCCTCGCGGCCGCCGTGGCCGATGGCACCGTGCCG GAGGCCCGTCTTGCGGTGCTGATCGTGCTCGGCCGCTACACGGCGGGCCAGCGCTCGGCTCCCGAGGATCTGGAGGCGCC GGTCCAGCGCCTGCGCGACCTGCTGCCCGAGGCGGACTGGGCCATCTGCGCCTTCGGCCCGCACGAGACGGAGTGCCTCG TGGCCGCGAGCCGGAAAGGTGGCAAGATGCGGATCGGCTTCGAGAACAACCTCCTGCAGGCCGACGGGACGCCCGCCGCC GACAATGCCGCGCGCGTGGCCGAACTCGTGGCGGCGCTCGAAGCCGCGGGGCAGGGGGCCGGCACACCGGTGTAG
Upstream 100 bases:
>100_bases GAACTCGACGAGCTGGTGGACAAGCTCTCGGGCGCGCTCGACCGCGCCCTCGCGGCATGAGCGGGCGCGACGGGGCGCCG GTCTCAGGGCGGCGCGGCTG
Downstream 100 bases:
>100_bases CGCGCAGGCTGGCCGTCGCGATGAGGGCCGGGAGCGGCTGAAGGCGCTCGAGATCTCCCCGGCCTGAGATAAGCCGGGCC TCAGGCCGACGGGCGATGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MAVLPRIMLAPTGARLTKADHPALPVTIPEIVAAARAGRAAGADGLHAHVRDAEGRHVLDAGLYAELLAELDRAAPGFPV QVTTEAVGRYTPAEQRALVERLRPASVSIAFREISAEPDPRLTRRFFAFCAEAGCHVQHILYDLTDVAGLAAAVADGTVP EARLAVLIVLGRYTAGQRSAPEDLEAPVQRLRDLLPEADWAICAFGPHETECLVAASRKGGKMRIGFENNLLQADGTPAA DNAARVAELVAALEAAGQGAGTPV
Sequences:
>Translated_264_residues MAVLPRIMLAPTGARLTKADHPALPVTIPEIVAAARAGRAAGADGLHAHVRDAEGRHVLDAGLYAELLAELDRAAPGFPV QVTTEAVGRYTPAEQRALVERLRPASVSIAFREISAEPDPRLTRRFFAFCAEAGCHVQHILYDLTDVAGLAAAVADGTVP EARLAVLIVLGRYTAGQRSAPEDLEAPVQRLRDLLPEADWAICAFGPHETECLVAASRKGGKMRIGFENNLLQADGTPAA DNAARVAELVAALEAAGQGAGTPV >Mature_263_residues AVLPRIMLAPTGARLTKADHPALPVTIPEIVAAARAGRAAGADGLHAHVRDAEGRHVLDAGLYAELLAELDRAAPGFPVQ VTTEAVGRYTPAEQRALVERLRPASVSIAFREISAEPDPRLTRRFFAFCAEAGCHVQHILYDLTDVAGLAAAVADGTVPE ARLAVLIVLGRYTAGQRSAPEDLEAPVQRLRDLLPEADWAICAFGPHETECLVAASRKGGKMRIGFENNLLQADGTPAAD NAARVAELVAALEAAGQGAGTPV
Specific function: Unknown
COG id: COG3246
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27737; Mature: 27606
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLPRIMLAPTGARLTKADHPALPVTIPEIVAAARAGRAAGADGLHAHVRDAEGRHVLD CCCCCCHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCEEHCCCCCCCEEHH AGLYAELLAELDRAAPGFPVQVTTEAVGRYTPAEQRALVERLRPASVSIAFREISAEPDP HHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCHHHHHHHHHHCCCHHEEEEEECCCCCCH RLTRRFFAFCAEAGCHVQHILYDLTDVAGLAAAVADGTVPEARLAVLIVLGRYTAGQRSA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC PEDLEAPVQRLRDLLPEADWAICAFGPHETECLVAASRKGGKMRIGFENNLLQADGTPAA CHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCCEEEECCCCCEEECCCCCCC DNAARVAELVAALEAAGQGAGTPV CHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AVLPRIMLAPTGARLTKADHPALPVTIPEIVAAARAGRAAGADGLHAHVRDAEGRHVLD CCCCCHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCEEHCCCCCCCEEHH AGLYAELLAELDRAAPGFPVQVTTEAVGRYTPAEQRALVERLRPASVSIAFREISAEPDP HHHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCHHHHHHHHHHCCCHHEEEEEECCCCCCH RLTRRFFAFCAEAGCHVQHILYDLTDVAGLAAAVADGTVPEARLAVLIVLGRYTAGQRSA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC PEDLEAPVQRLRDLLPEADWAICAFGPHETECLVAASRKGGKMRIGFENNLLQADGTPAA CHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCCEEEECCCCCEEECCCCCCC DNAARVAELVAALEAAGQGAGTPV CHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA