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The map label for this gene is yecS [H]

Identifier: 77465748

GI number: 77465748

Start: 869686

End: 870345

Strand: Reverse

Name: yecS [H]

Synonym: RSP_3744

Alternate gene names: 77465748

Gene position: 870345-869686 (Counterclockwise)

Preceding gene: 77465749

Following gene: 77465747

Centisome position: 92.29

GC content: 65.91

Gene sequence:

>660_bases
ATGAACGGCTCTCTTCTCCAGGATATCGCGGCCTACGGACCGGGCTTTCTCAAGGCCGCCTGGCTCGTCCTGTGGCTGAC
GCTGCTCACCATCCTCGTGAGCTGGGCCTGCGGCCTGCTGGCCGCGCTCGCCCAGCGGTCCGAGCTGCGTCTCGTGCGCG
GCGCCGCCGCCTTCTACATCTGGTTCATCCGCGGCACGCCCGCCCTCATCCAGATCTTCATCATCTATTTCGGCCTGCCG
CAGCTCGGCCTGCGCCTGTCGCCCTTCACCGCGGGCGTCATCGCGCTCGGCATCAACTCGGGCGCCTATGTGGCCGAGAT
CGTCCGCTCGGGCCTCTCGGCCATCCACCGCGGCCAGACCGAGAGCGCGCTGGCGCTGGGCTTCAGCCAGAGCCAGACCA
TGCGTACCATCGTGCTGCCGCAGGTCTTCCGCATCATCCTGCCCTCGATCACCAACGAGGCGATCTCGACGCTGAAGAAC
ACGTCGCTTCTGTCCACGATCACGGTGGTCGAGCTCACGCTCTATGCCCAGACCCTGATCTCGGCGACCTTCCGGCCCTT
CGACTTCTACATCGCCGTGGCCGTCATCTATCTTGTCCTCACCACGGTGCTCACCCAGATCGCGAACTGGGCCGAGCGGC
GCTACGCAAGGCTGAGCTGA

Upstream 100 bases:

>100_bases
CGCCCGACCGGGTGCTGCGCAACCCAGAAAGCCCGCGGCTGCGGCAGTTCCTGCACCGCATCCTGCACGACGAAATGACC
CGGACGACAGAGGATCAGGC

Downstream 100 bases:

>100_bases
CCCATGTCCGTCCTGCCCACCGATTCGCTCTCCACCCCCCGCTTCGTCGGCCTGCCGAGCTTCATGCGCCTGCCCATGGC
CACGGAGCTTCAGGGGCTCG

Product: ABC amino acid transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MNGSLLQDIAAYGPGFLKAAWLVLWLTLLTILVSWACGLLAALAQRSELRLVRGAAAFYIWFIRGTPALIQIFIIYFGLP
QLGLRLSPFTAGVIALGINSGAYVAEIVRSGLSAIHRGQTESALALGFSQSQTMRTIVLPQVFRIILPSITNEAISTLKN
TSLLSTITVVELTLYAQTLISATFRPFDFYIAVAVIYLVLTTVLTQIANWAERRYARLS

Sequences:

>Translated_219_residues
MNGSLLQDIAAYGPGFLKAAWLVLWLTLLTILVSWACGLLAALAQRSELRLVRGAAAFYIWFIRGTPALIQIFIIYFGLP
QLGLRLSPFTAGVIALGINSGAYVAEIVRSGLSAIHRGQTESALALGFSQSQTMRTIVLPQVFRIILPSITNEAISTLKN
TSLLSTITVVELTLYAQTLISATFRPFDFYIAVAVIYLVLTTVLTQIANWAERRYARLS
>Mature_219_residues
MNGSLLQDIAAYGPGFLKAAWLVLWLTLLTILVSWACGLLAALAQRSELRLVRGAAAFYIWFIRGTPALIQIFIIYFGLP
QLGLRLSPFTAGVIALGINSGAYVAEIVRSGLSAIHRGQTESALALGFSQSQTMRTIVLPQVFRIILPSITNEAISTLKN
TSLLSTITVVELTLYAQTLISATFRPFDFYIAVAVIYLVLTTVLTQIANWAERRYARLS

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=204, Percent_Identity=40.6862745098039, Blast_Score=148, Evalue=2e-37,
Organism=Escherichia coli, GI1787030, Length=203, Percent_Identity=41.3793103448276, Blast_Score=147, Evalue=6e-37,
Organism=Escherichia coli, GI1788646, Length=212, Percent_Identity=33.4905660377358, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1788645, Length=204, Percent_Identity=30.8823529411765, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1787087, Length=226, Percent_Identity=31.858407079646, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1787086, Length=174, Percent_Identity=39.0804597701149, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1786874, Length=178, Percent_Identity=27.5280898876405, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI87082239, Length=189, Percent_Identity=30.6878306878307, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI48994930, Length=136, Percent_Identity=30.8823529411765, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1786873, Length=211, Percent_Identity=26.5402843601896, Blast_Score=77, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23969; Mature: 23969

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGSLLQDIAAYGPGFLKAAWLVLWLTLLTILVSWACGLLAALAQRSELRLVRGAAAFYI
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFIRGTPALIQIFIIYFGLPQLGLRLSPFTAGVIALGINSGAYVAEIVRSGLSAIHRGQT
HHHCCCHHHHHHHHHHHCCHHHCCEECCHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCC
ESALALGFSQSQTMRTIVLPQVFRIILPSITNEAISTLKNTSLLSTITVVELTLYAQTLI
CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SATFRPFDFYIAVAVIYLVLTTVLTQIANWAERRYARLS
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNGSLLQDIAAYGPGFLKAAWLVLWLTLLTILVSWACGLLAALAQRSELRLVRGAAAFYI
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFIRGTPALIQIFIIYFGLPQLGLRLSPFTAGVIALGINSGAYVAEIVRSGLSAIHRGQT
HHHCCCHHHHHHHHHHHCCHHHCCEECCHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCC
ESALALGFSQSQTMRTIVLPQVFRIILPSITNEAISTLKNTSLLSTITVVELTLYAQTLI
CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SATFRPFDFYIAVAVIYLVLTTVLTQIANWAERRYARLS
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]