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The map label for this gene is speB1 [H]

Identifier: 77465747

GI number: 77465747

Start: 868720

End: 869682

Strand: Reverse

Name: speB1 [H]

Synonym: RSP_3743

Alternate gene names: 77465747

Gene position: 869682-868720 (Counterclockwise)

Preceding gene: 77465748

Following gene: 77465746

Centisome position: 92.22

GC content: 70.92

Gene sequence:

>963_bases
ATGTCCGTCCTGCCCACCGATTCGCTCTCCACCCCCCGCTTCGTCGGCCTGCCGAGCTTCATGCGCCTGCCCATGGCCAC
GGAGCTTCAGGGGCTCGACGCCGCCATCGTCGGCCTGCCCTCGGATTCGGGCGCGCCCTTCCGCACCGGCGCGCGCTTCG
CGCCGAACGCGCTGCGCGCCATGTCGGTGATGCTGCGCCCGATCAACCCCTACCGCGGCCACATCAACATCTTCGAGGTC
CTGCGCGTGGCCGATGCGGGCGACGCGACCTGCGTGCCGGGCTACGAGATCGAGAGCCTCGCCGCGCTCGAACGGGCGCT
CGACGCGGTGGTCGAGGCCGGCGCCGTGCCCTTCGGCATCGGGGGCGACCACTCGGTCTCGCTCGCCGGTCTCCGGGCGG
TGGCCAAGCGTCACGGGCCGCTCGGCCTCGTGCATTTCGACAGCCACACCGACACCTGGGACAGCTACTTCGACGGCAAG
CGCTACAGCGCCGGCACCATGTTCCGCCGGGCCATCGAGGAGGGCATCGTCGATCCCGCCCGCTCGATCCAGGTGGGGAT
GCGCGGCTCGCTGTTCCAGCCGGCCGATGTCAGCCAGTCGGTCGATCTCGGCCTCGAGGTCATCACCTGCGACGAGATGT
TCGCGCTGGGACTGCCCGAGACCGCCCGCCGGATCGCCGCGCGCAGCGCAGGTCACCCGGCCTTCCTGAGCTTCGATCTC
GATTTCGTGGATCCCGCCTATGCGCCCGGCGTCGAGACGCCCGAGTGCGGCGGCCCCACCGCGCGCGAGACGCTCTCGCT
GCTGCGCAGCCTCCAGGGCCTCAACCTCGTCGGCTGCGACGTGGTCGAGCTCAATCCTTCCTATGACGGTCCGGGCCAGA
TCACCGCCCTGCTCGGGGCCACCGTCATGGCCGAGCTTCTGGCGATCCTCGCCGAGGCGCGGGTCCGCGAGCGGTCACGA
TAA

Upstream 100 bases:

>100_bases
CTTCTACATCGCCGTGGCCGTCATCTATCTTGTCCTCACCACGGTGCTCACCCAGATCGCGAACTGGGCCGAGCGGCGCT
ACGCAAGGCTGAGCTGACCC

Downstream 100 bases:

>100_bases
GCAGCGTCCCAACAGAGAGAATAGATCATGACCCTGAAAGCCCTGGCGCTCGGCGCCGTCCTTGCCCTCCAGACCTTCGC
CCCGGCCGCCTGGGCCGCCG

Product: agmatinase

Products: NA

Alternate protein names: GBase; D-arginase [H]

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSVLPTDSLSTPRFVGLPSFMRLPMATELQGLDAAIVGLPSDSGAPFRTGARFAPNALRAMSVMLRPINPYRGHINIFEV
LRVADAGDATCVPGYEIESLAALERALDAVVEAGAVPFGIGGDHSVSLAGLRAVAKRHGPLGLVHFDSHTDTWDSYFDGK
RYSAGTMFRRAIEEGIVDPARSIQVGMRGSLFQPADVSQSVDLGLEVITCDEMFALGLPETARRIAARSAGHPAFLSFDL
DFVDPAYAPGVETPECGGPTARETLSLLRSLQGLNLVGCDVVELNPSYDGPGQITALLGATVMAELLAILAEARVRERSR

Sequences:

>Translated_320_residues
MSVLPTDSLSTPRFVGLPSFMRLPMATELQGLDAAIVGLPSDSGAPFRTGARFAPNALRAMSVMLRPINPYRGHINIFEV
LRVADAGDATCVPGYEIESLAALERALDAVVEAGAVPFGIGGDHSVSLAGLRAVAKRHGPLGLVHFDSHTDTWDSYFDGK
RYSAGTMFRRAIEEGIVDPARSIQVGMRGSLFQPADVSQSVDLGLEVITCDEMFALGLPETARRIAARSAGHPAFLSFDL
DFVDPAYAPGVETPECGGPTARETLSLLRSLQGLNLVGCDVVELNPSYDGPGQITALLGATVMAELLAILAEARVRERSR
>Mature_319_residues
SVLPTDSLSTPRFVGLPSFMRLPMATELQGLDAAIVGLPSDSGAPFRTGARFAPNALRAMSVMLRPINPYRGHINIFEVL
RVADAGDATCVPGYEIESLAALERALDAVVEAGAVPFGIGGDHSVSLAGLRAVAKRHGPLGLVHFDSHTDTWDSYFDGKR
YSAGTMFRRAIEEGIVDPARSIQVGMRGSLFQPADVSQSVDLGLEVITCDEMFALGLPETARRIAARSAGHPAFLSFDLD
FVDPAYAPGVETPECGGPTARETLSLLRSLQGLNLVGCDVVELNPSYDGPGQITALLGATVMAELLAILAEARVRERSR

Specific function: Catalyzes The Formation Of Putrescine From Agmatine. [C]

COG id: COG0010

COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arginase family. Agmatinase subfamily [H]

Homologues:

Organism=Homo sapiens, GI37537722, Length=313, Percent_Identity=40.8945686900958, Blast_Score=229, Evalue=3e-60,
Organism=Escherichia coli, GI1789306, Length=298, Percent_Identity=36.9127516778523, Blast_Score=163, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6325146, Length=210, Percent_Identity=28.0952380952381, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005925
- InterPro:   IPR006035
- InterPro:   IPR020855 [H]

Pfam domain/function: PF00491 Arginase [H]

EC number: =3.5.3.7; =3.5.3.10 [H]

Molecular weight: Translated: 34006; Mature: 33875

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00147 ARGINASE_1 ; PS00148 ARGINASE_2 ; PS01053 ARGINASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLPTDSLSTPRFVGLPSFMRLPMATELQGLDAAIVGLPSDSGAPFRTGARFAPNALRA
CCCCCCCCCCCCCEECCCHHHHCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHH
MSVMLRPINPYRGHINIFEVLRVADAGDATCVPGYEIESLAALERALDAVVEAGAVPFGI
HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
GGDHSVSLAGLRAVAKRHGPLGLVHFDSHTDTWDSYFDGKRYSAGTMFRRAIEEGIVDPA
CCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCH
RSIQVGMRGSLFQPADVSQSVDLGLEVITCDEMFALGLPETARRIAARSAGHPAFLSFDL
HHHEECCCCCCCCCCCCCCHHHCCEEEEEECHHHHCCCCHHHHHHHHHCCCCCEEEEEEC
DFVDPAYAPGVETPECGGPTARETLSLLRSLQGLNLVGCDVVELNPSYDGPGQITALLGA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCEEEEECCCCCCCHHHHHHHHH
TVMAELLAILAEARVRERSR
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVLPTDSLSTPRFVGLPSFMRLPMATELQGLDAAIVGLPSDSGAPFRTGARFAPNALRA
CCCCCCCCCCCCEECCCHHHHCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHH
MSVMLRPINPYRGHINIFEVLRVADAGDATCVPGYEIESLAALERALDAVVEAGAVPFGI
HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
GGDHSVSLAGLRAVAKRHGPLGLVHFDSHTDTWDSYFDGKRYSAGTMFRRAIEEGIVDPA
CCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCH
RSIQVGMRGSLFQPADVSQSVDLGLEVITCDEMFALGLPETARRIAARSAGHPAFLSFDL
HHHEECCCCCCCCCCCCCCHHHCCEEEEEECHHHHCCCCHHHHHHHHHCCCCCEEEEEEC
DFVDPAYAPGVETPECGGPTARETLSLLRSLQGLNLVGCDVVELNPSYDGPGQITALLGA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCEEEEECCCCCCCHHHHHHHHH
TVMAELLAILAEARVRERSR
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA