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The map label for this gene is 77465454

Identifier: 77465454

GI number: 77465454

Start: 522357

End: 522977

Strand: Reverse

Name: 77465454

Synonym: RSP_3452

Alternate gene names: NA

Gene position: 522977-522357 (Counterclockwise)

Preceding gene: 77465455

Following gene: 77465453

Centisome position: 55.46

GC content: 69.4

Gene sequence:

>621_bases
ATGCGGCGGGGCGAAGGCCCCGCCCGCATTCCCCCTCTCCGGCTCCGCGACGCGGCGCCTCCTTCCCCTCGTCGACCGTT
GAGCTCCATGACCTCACTTGCCCCAACCCGCTTCCGCAGGACGCTCGCCGTGATCGACGGCGTAACCGATCTGGGCGGCT
ATCTCGCGGCCCTGTGCCTCCTCGGTATCCTCGTCCTCGTGGCGGCCGAGATCTTCTCGCGCAACCTTCTCGCCTATTCG
ATCCACTTCTCCTGGGATCTGGCGGGCTACTTCATGGGAACCTGCTTCCTTCTGGCCAGCGGCAGCGCACTCAAGGGCGG
CAGCCATGTCCGCGTCACGGCCCTGCTCGAATCGATGCCCCGCGCGGTGGGCCGCACGCTCGAGTTCGCGGCCTGCCTCG
TGGGCCTCGCGATCTGCGCCTATCTGAGCTGGGCCCTGATCGAGATGGCCTGGCTCTCGGCGCAGCGCGGCTCGACCGCC
GCCACCTCGTTCCGCGTCCCGCTCGTCTACCCGCAGGCGGCGCTTGCGACGGGCGCCACGATCCTCACCCTGCAGTGCCT
CGCCCAGATCCTGCGCCTCTTGCGCGGCGAGGAACTCTCCGTCGGCCCCGGTCTGGAATAG

Upstream 100 bases:

>100_bases
CGAGAAGGCGCTGCCGCTCTGGGATGCCTACAAGACCCGGGTGCCGGAGGCGGCGCCGATCATCGACGCCTATCTGACCC
TGCGCAACTGACGGGACAGG

Downstream 100 bases:

>100_bases
GAGCCGTCCATGGGAAAGATCATTGCCACCCTGCTCGGCCTTCTCACGCTGCTTCTGGGCAGCGGCCTCTGGATCGGCCT
CGGGCTCATCGGCACCGGCG

Product: TRAP-T family transporter small inner membrane subunit

Products: NA

Alternate protein names: Trap-T Family Transporter Small Inner Membrane Subunit

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MRRGEGPARIPPLRLRDAAPPSPRRPLSSMTSLAPTRFRRTLAVIDGVTDLGGYLAALCLLGILVLVAAEIFSRNLLAYS
IHFSWDLAGYFMGTCFLLASGSALKGGSHVRVTALLESMPRAVGRTLEFAACLVGLAICAYLSWALIEMAWLSAQRGSTA
ATSFRVPLVYPQAALATGATILTLQCLAQILRLLRGEELSVGPGLE

Sequences:

>Translated_206_residues
MRRGEGPARIPPLRLRDAAPPSPRRPLSSMTSLAPTRFRRTLAVIDGVTDLGGYLAALCLLGILVLVAAEIFSRNLLAYS
IHFSWDLAGYFMGTCFLLASGSALKGGSHVRVTALLESMPRAVGRTLEFAACLVGLAICAYLSWALIEMAWLSAQRGSTA
ATSFRVPLVYPQAALATGATILTLQCLAQILRLLRGEELSVGPGLE
>Mature_206_residues
MRRGEGPARIPPLRLRDAAPPSPRRPLSSMTSLAPTRFRRTLAVIDGVTDLGGYLAALCLLGILVLVAAEIFSRNLLAYS
IHFSWDLAGYFMGTCFLLASGSALKGGSHVRVTALLESMPRAVGRTLEFAACLVGLAICAYLSWALIEMAWLSAQRGSTA
ATSFRVPLVYPQAALATGATILTLQCLAQILRLLRGEELSVGPGLE

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21971; Mature: 21971

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRGEGPARIPPLRLRDAAPPSPRRPLSSMTSLAPTRFRRTLAVIDGVTDLGGYLAALCL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LGILVLVAAEIFSRNLLAYSIHFSWDLAGYFMGTCFLLASGSALKGGSHVRVTALLESMP
HHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
RAVGRTLEFAACLVGLAICAYLSWALIEMAWLSAQRGSTAATSFRVPLVYPQAALATGAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCEECCHHHHHHHHH
ILTLQCLAQILRLLRGEELSVGPGLE
HHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRRGEGPARIPPLRLRDAAPPSPRRPLSSMTSLAPTRFRRTLAVIDGVTDLGGYLAALCL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LGILVLVAAEIFSRNLLAYSIHFSWDLAGYFMGTCFLLASGSALKGGSHVRVTALLESMP
HHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
RAVGRTLEFAACLVGLAICAYLSWALIEMAWLSAQRGSTAATSFRVPLVYPQAALATGAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCEECCHHHHHHHHH
ILTLQCLAQILRLLRGEELSVGPGLE
HHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA