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The map label for this gene is ygiB [C]

Identifier: 77465427

GI number: 77465427

Start: 493395

End: 493973

Strand: Reverse

Name: ygiB [C]

Synonym: RSP_3425

Alternate gene names: 77465427

Gene position: 493973-493395 (Counterclockwise)

Preceding gene: 77465428

Following gene: 77465425

Centisome position: 52.38

GC content: 71.85

Gene sequence:

>579_bases
ATGAGACGCCGCTCGCGCACCGTTGCCCTCGTCATCCTCGGCGCCGCCTCCTTCGCGCTGGCCGGCTGCCGCGAGGAGGA
GGTCGAGGCCCAGGCCTTCCCCGATGTCGAGAGCTGCCGCGCCGCGGCGAGCAACGGCGGGCTCTTCAGCGTCGAGGAAT
GCGACAAATCCTTTGCCGAGGCGCAGCAGCTCCATGTCGAATCCGCGCCCCGCTACGACAGCGTCGCCGCCTGCGAGGCG
GAACATGGCGCGGGCGGCTGCGGCAGCGAGAGCGAGGTGACGGGCGGCAGCGGGATGGGCGGCATCTTCATGCCGCTGCT
CACCGGCTATCTGATCGGCAGCATGCTCAGCGGCCGGGGCGTGGCTTCCGCGCAGCCCCTCTACCGCACCGCGGACGGCA
AGTTCACAAATGCCGCCCGCACGAGCACCTATTCCAGCAACACGGGCTCGGCGCGCCTCGGCACCAGCACCTTTGCCCGG
CCGCCCTCCACCATCGGCAAGCCGCCGATGTCTGTCGCGAGCCCCGCCTCGCGCGGCGGCTTCGGCAGCACCGGCGCCTC
GCGCGGCTTTGGCGGCTAG

Upstream 100 bases:

>100_bases
TGGGCGAGACCTGCGTGGGCATGGGGCTGCGCGAGGATCGCTCGCGCATCACGCAGGATCTGTCGCGGTTCAAGCCGCAT
TTCGTCCGGGAGGAGAAAGC

Downstream 100 bases:

>100_bases
GGCCGGGTCGAAGAGACCGCCCGGCTGCCCGAGCGCAGGGACAGGGGGCGGGCAGGCTCAGGTCCTGTCGGCCTCCGCCG
GACGGGATGCGCAGCCCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MRRRSRTVALVILGAASFALAGCREEEVEAQAFPDVESCRAAASNGGLFSVEECDKSFAEAQQLHVESAPRYDSVAACEA
EHGAGGCGSESEVTGGSGMGGIFMPLLTGYLIGSMLSGRGVASAQPLYRTADGKFTNAARTSTYSSNTGSARLGTSTFAR
PPSTIGKPPMSVASPASRGGFGSTGASRGFGG

Sequences:

>Translated_192_residues
MRRRSRTVALVILGAASFALAGCREEEVEAQAFPDVESCRAAASNGGLFSVEECDKSFAEAQQLHVESAPRYDSVAACEA
EHGAGGCGSESEVTGGSGMGGIFMPLLTGYLIGSMLSGRGVASAQPLYRTADGKFTNAARTSTYSSNTGSARLGTSTFAR
PPSTIGKPPMSVASPASRGGFGSTGASRGFGG
>Mature_192_residues
MRRRSRTVALVILGAASFALAGCREEEVEAQAFPDVESCRAAASNGGLFSVEECDKSFAEAQQLHVESAPRYDSVAACEA
EHGAGGCGSESEVTGGSGMGGIFMPLLTGYLIGSMLSGRGVASAQPLYRTADGKFTNAARTSTYSSNTGSARLGTSTFAR
PPSTIGKPPMSVASPASRGGFGSTGASRGFGG

Specific function: Unknown

COG id: COG5463

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0441 family [H]

Homologues:

Organism=Escherichia coli, GI145693179, Length=201, Percent_Identity=27.8606965174129, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009576 [H]

Pfam domain/function: PF06693 DUF1190 [H]

EC number: NA

Molecular weight: Translated: 19476; Mature: 19476

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRSRTVALVILGAASFALAGCREEEVEAQAFPDVESCRAAASNGGLFSVEECDKSFAE
CCCCCCEEEEEEECHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCEEEHHHHHHHHHH
AQQLHVESAPRYDSVAACEAEHGAGGCGSESEVTGGSGMGGIFMPLLTGYLIGSMLSGRG
HHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
VASAQPLYRTADGKFTNAARTSTYSSNTGSARLGTSTFARPPSTIGKPPMSVASPASRGG
CCCCCCCEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FGSTGASRGFGG
CCCCCCCCCCCC
>Mature Secondary Structure
MRRRSRTVALVILGAASFALAGCREEEVEAQAFPDVESCRAAASNGGLFSVEECDKSFAE
CCCCCCEEEEEEECHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCEEEHHHHHHHHHH
AQQLHVESAPRYDSVAACEAEHGAGGCGSESEVTGGSGMGGIFMPLLTGYLIGSMLSGRG
HHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
VASAQPLYRTADGKFTNAARTSTYSSNTGSARLGTSTFARPPSTIGKPPMSVASPASRGG
CCCCCCCEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FGSTGASRGFGG
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA