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The map label for this gene is ygiC [H]

Identifier: 77465428

GI number: 77465428

Start: 493970

End: 495172

Strand: Reverse

Name: ygiC [H]

Synonym: RSP_3426

Alternate gene names: 77465428

Gene position: 495172-493970 (Counterclockwise)

Preceding gene: 77465436

Following gene: 77465427

Centisome position: 52.51

GC content: 67.66

Gene sequence:

>1203_bases
ATGGAGAGGATCGACCTGCCCGAGCGCCCCGGCTGGCGCGACCGCGCCGAGGAACTCGGCTTCACCTTCGCCGACATGCA
CGGCGAGCCCTATTGGGATGAGACGTCGGCCTACGGCTTCGGCCTGGCCGAGGTCGAGGAGATGATCGAGGATCCCGCGA
CGGCGCTCCACGCGATGTGCCGCGAGGCGGCGGGCCACATCATCGGCAGCGAGGAGCTGCTCGACCGGCTGGCCATTCCG
GCGGAGCATCGCGACCTGATCGCGGAAAGCTGGCAGCGCGGCGATCCCGAGATCTATGGCCGGTTCGATCTGGCCCATGA
CGGGCAGGGGCCGTCGAAGCTCCTCGAATACAACGCCGACACGCCGACCTCGCTCTATGAAAGCGCCTCGTTCCAGTGGA
GCTGGCTGCAGGACCAGATCGAGGCGGGCGTGCTCCCCGCGCGATCGGACCAGTTCAACGGCATCCACGAAGCCCTGGTC
GAGCGCTTCCGCAGCCTCTTCCCGCCCGACACCGATCTGCATTTCACCGCCGTGGGCGGCAATCCCGAGGATTATGCCAC
GGTCGAATGCATGGGCTGGGCCGCCCGCGCCGCCGGCCTCGGCGCGCATTATTCCGATCTCGAGAAAATCGGGCTCAGTC
GGGAGGGCCAGTTCCTCGATGCCGACAACCGGGTGATCGGGACGCTGTTCAAGCTCTACCCCTGGGAAGACCTGCTGCGC
GACGATTATGCGCGCCACATCCGCAGCTCGAACTGCCTGATGCTGGAGCCCGCCTGGAAGGCGGTCCTGTCGAACAAGGG
CCTGCTGCCGGTGCTCTGGCAGATGTTCGAAGGCCATCCGAACCTGCTGCCGGCCTTCTTCGAGGCCGAGGTCGCGGCGG
GCGGACCGGCGGTCGACCGCGCGGCAGAGACGCTGCGGCGGGGCCATGTCCTCAAGCCGCTCTTCTCGCGCGAGGGCGCC
TCGATTTCGATCCTCGAGGAGGGGCAGGTCACCGAGGCCTCGCCCCGCGACGATTATGCCGGGCATCCGCGGATCGTTCA
GGCCTATCATCCCCTGCCGGTCTTCGGCGGCTTCCGCCCCGTCGTCGGCGCCTGGATCGTGGGCGAGACCTGCGTGGGCA
TGGGGCTGCGCGAGGATCGCTCGCGCATCACGCAGGATCTGTCGCGGTTCAAGCCGCATTTCGTCCGGGAGGAGAAAGCA
TGA

Upstream 100 bases:

>100_bases
TCCCTCCACGCGGGGCGGCCGATCCGGCACCTCTCGTCGCGGCCGGGAATGCCACCGCAGCCACTGGCGCCGGGGCGCGC
GAACGCATAGGTGAGGGGTC

Downstream 100 bases:

>100_bases
GACGCCGCTCGCGCACCGTTGCCCTCGTCATCCTCGGCGCCGCCTCCTTCGCGCTGGCCGGCTGCCGCGAGGAGGAGGTC
GAGGCCCAGGCCTTCCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MERIDLPERPGWRDRAEELGFTFADMHGEPYWDETSAYGFGLAEVEEMIEDPATALHAMCREAAGHIIGSEELLDRLAIP
AEHRDLIAESWQRGDPEIYGRFDLAHDGQGPSKLLEYNADTPTSLYESASFQWSWLQDQIEAGVLPARSDQFNGIHEALV
ERFRSLFPPDTDLHFTAVGGNPEDYATVECMGWAARAAGLGAHYSDLEKIGLSREGQFLDADNRVIGTLFKLYPWEDLLR
DDYARHIRSSNCLMLEPAWKAVLSNKGLLPVLWQMFEGHPNLLPAFFEAEVAAGGPAVDRAAETLRRGHVLKPLFSREGA
SISILEEGQVTEASPRDDYAGHPRIVQAYHPLPVFGGFRPVVGAWIVGETCVGMGLREDRSRITQDLSRFKPHFVREEKA

Sequences:

>Translated_400_residues
MERIDLPERPGWRDRAEELGFTFADMHGEPYWDETSAYGFGLAEVEEMIEDPATALHAMCREAAGHIIGSEELLDRLAIP
AEHRDLIAESWQRGDPEIYGRFDLAHDGQGPSKLLEYNADTPTSLYESASFQWSWLQDQIEAGVLPARSDQFNGIHEALV
ERFRSLFPPDTDLHFTAVGGNPEDYATVECMGWAARAAGLGAHYSDLEKIGLSREGQFLDADNRVIGTLFKLYPWEDLLR
DDYARHIRSSNCLMLEPAWKAVLSNKGLLPVLWQMFEGHPNLLPAFFEAEVAAGGPAVDRAAETLRRGHVLKPLFSREGA
SISILEEGQVTEASPRDDYAGHPRIVQAYHPLPVFGGFRPVVGAWIVGETCVGMGLREDRSRITQDLSRFKPHFVREEKA
>Mature_400_residues
MERIDLPERPGWRDRAEELGFTFADMHGEPYWDETSAYGFGLAEVEEMIEDPATALHAMCREAAGHIIGSEELLDRLAIP
AEHRDLIAESWQRGDPEIYGRFDLAHDGQGPSKLLEYNADTPTSLYESASFQWSWLQDQIEAGVLPARSDQFNGIHEALV
ERFRSLFPPDTDLHFTAVGGNPEDYATVECMGWAARAAGLGAHYSDLEKIGLSREGQFLDADNRVIGTLFKLYPWEDLLR
DDYARHIRSSNCLMLEPAWKAVLSNKGLLPVLWQMFEGHPNLLPAFFEAEVAAGGPAVDRAAETLRRGHVLKPLFSREGA
SISILEEGQVTEASPRDDYAGHPRIVQAYHPLPVFGGFRPVVGAWIVGETCVGMGLREDRSRITQDLSRFKPHFVREEKA

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli yjfC [H]

Homologues:

Organism=Escherichia coli, GI1789416, Length=399, Percent_Identity=44.8621553884712, Blast_Score=354, Evalue=5e-99,
Organism=Escherichia coli, GI1790629, Length=398, Percent_Identity=43.21608040201, Blast_Score=327, Evalue=1e-90,
Organism=Escherichia coli, GI1789361, Length=412, Percent_Identity=23.3009708737864, Blast_Score=89, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005494
- InterPro:   IPR016185 [H]

Pfam domain/function: PF03738 GSP_synth [H]

EC number: NA

Molecular weight: Translated: 44803; Mature: 44803

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERIDLPERPGWRDRAEELGFTFADMHGEPYWDETSAYGFGLAEVEEMIEDPATALHAMC
CCCCCCCCCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHH
REAAGHIIGSEELLDRLAIPAEHRDLIAESWQRGDPEIYGRFDLAHDGQGPSKLLEYNAD
HHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHCCCCC
TPTSLYESASFQWSWLQDQIEAGVLPARSDQFNGIHEALVERFRSLFPPDTDLHFTAVGG
CCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECC
NPEDYATVECMGWAARAAGLGAHYSDLEKIGLSREGQFLDADNRVIGTLFKLYPWEDLLR
CCCCCEEEEHHHHHHHHHCCCCCHHHHHHHCCCCCCCEECCCCHHHHHHHHHCCHHHHHH
DDYARHIRSSNCLMLEPAWKAVLSNKGLLPVLWQMFEGHPNLLPAFFEAEVAAGGPAVDR
HHHHHHHCCCCEEEECHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHH
AAETLRRGHVLKPLFSREGASISILEEGQVTEASPRDDYAGHPRIVQAYHPLPVFGGFRP
HHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHH
VVGAWIVGETCVGMGLREDRSRITQDLSRFKPHFVREEKA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCC
>Mature Secondary Structure
MERIDLPERPGWRDRAEELGFTFADMHGEPYWDETSAYGFGLAEVEEMIEDPATALHAMC
CCCCCCCCCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHH
REAAGHIIGSEELLDRLAIPAEHRDLIAESWQRGDPEIYGRFDLAHDGQGPSKLLEYNAD
HHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHCCCCC
TPTSLYESASFQWSWLQDQIEAGVLPARSDQFNGIHEALVERFRSLFPPDTDLHFTAVGG
CCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECC
NPEDYATVECMGWAARAAGLGAHYSDLEKIGLSREGQFLDADNRVIGTLFKLYPWEDLLR
CCCCCEEEEHHHHHHHHHCCCCCHHHHHHHCCCCCCCEECCCCHHHHHHHHHCCHHHHHH
DDYARHIRSSNCLMLEPAWKAVLSNKGLLPVLWQMFEGHPNLLPAFFEAEVAAGGPAVDR
HHHHHHHCCCCEEEECHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHH
AAETLRRGHVLKPLFSREGASISILEEGQVTEASPRDDYAGHPRIVQAYHPLPVFGGFRP
HHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHH
VVGAWIVGETCVGMGLREDRSRITQDLSRFKPHFVREEKA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]