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The map label for this gene is hpsA [H]

Identifier: 77465399

GI number: 77465399

Start: 462185

End: 462838

Strand: Reverse

Name: hpsA [H]

Synonym: RSP_3398

Alternate gene names: 77465399

Gene position: 462838-462185 (Counterclockwise)

Preceding gene: 77465400

Following gene: 77465398

Centisome position: 49.08

GC content: 69.11

Gene sequence:

>654_bases
ATGTTCACTGTCAACCAGATGCCCCCGCAGATCGCGCCGGCCCTCGTCGCGCGGATGGAGAAGGTGGAGGTGGCCACCGT
GGGTCACTTCCTCCATTCCGGTTTCCCCGACCGCGATCTGCGCGCGGTCCTGCCCGAGAAGCGCGTGGCGGGCACCGCCG
TCACCGTGCGGCTGCCGCATGCGGATTCGACGATCCTCCACTATCTGACAAAGCTCGTCCGGCCCGGCGATTTCATCATC
GTGGACCGCTGCGGCGACACGAAACACGCCTGCTGGGGCGGGGTCGTGACCCATGCGATGAAGCTCGGCGGCATCGTGGG
CGCGGCCATCGACGGCCCGGCCACCGACTTCTCCGAGATCCGCCGGGTCGAACTGCCGATGTGGTGCCGGGGGCCCGCGC
CGATCACGACGAAGATCCTCGGGCTCGAGGGCGCGATCAACGTGCCGGTGAGCCTCGGCGGGCACACCGTCCATCCGGGC
GATGCGGTCATTGCCGACGAGAGCGGCCTCGTGATCCTGCCGCCCGAGCGGGCGGAATGGGCCACCGAAAAGGCGCTCGG
GATGCAGGAGGCCGAGCTCGTGCTGCTCGACCGGCTGCGCAAGGGCGAATGGCTGCCCGACATTTCGGGGGCCACGAAGC
TCGTCGAGGCCTGA

Upstream 100 bases:

>100_bases
CGGCGAGGGTCTGACGACCGCCGTCGTCGATCCCGCCCGTATCGAGGCCGTCCGCCGTGACGTGCCCGTGGCCCAGCACC
ACGTTCTCTGAGGACTGCGC

Downstream 100 bases:

>100_bases
GGGGCCCCCGGCTCCGGCCGTGCCCCGCGCGGCCGGGACCCATTCACGAGAAGCAACAGGGAAAGGCAACGTCATGACGA
ACAGAAGCCTTGCGGCGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: HPS; D-arabino-3-hexulose-6-phosphate formaldehyde lyase [H]

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MFTVNQMPPQIAPALVARMEKVEVATVGHFLHSGFPDRDLRAVLPEKRVAGTAVTVRLPHADSTILHYLTKLVRPGDFII
VDRCGDTKHACWGGVVTHAMKLGGIVGAAIDGPATDFSEIRRVELPMWCRGPAPITTKILGLEGAINVPVSLGGHTVHPG
DAVIADESGLVILPPERAEWATEKALGMQEAELVLLDRLRKGEWLPDISGATKLVEA

Sequences:

>Translated_217_residues
MFTVNQMPPQIAPALVARMEKVEVATVGHFLHSGFPDRDLRAVLPEKRVAGTAVTVRLPHADSTILHYLTKLVRPGDFII
VDRCGDTKHACWGGVVTHAMKLGGIVGAAIDGPATDFSEIRRVELPMWCRGPAPITTKILGLEGAINVPVSLGGHTVHPG
DAVIADESGLVILPPERAEWATEKALGMQEAELVLLDRLRKGEWLPDISGATKLVEA
>Mature_217_residues
MFTVNQMPPQIAPALVARMEKVEVATVGHFLHSGFPDRDLRAVLPEKRVAGTAVTVRLPHADSTILHYLTKLVRPGDFII
VDRCGDTKHACWGGVVTHAMKLGGIVGAAIDGPATDFSEIRRVELPMWCRGPAPITTKILGLEGAINVPVSLGGHTVHPG
DAVIADESGLVILPPERAEWATEKALGMQEAELVLLDRLRKGEWLPDISGATKLVEA

Specific function: Catalyzes the condensation of ribulose 5-phosphate with formaldehyde to form 3-hexulose 6-phosphate [H]

COG id: COG0684

COG function: function code H; Demethylmenaquinone methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HPS/KGPDC family. HPS subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR017120
- InterPro:   IPR001754
- InterPro:   IPR011060
- InterPro:   IPR005493 [H]

Pfam domain/function: PF03737 Methyltransf_6; PF00215 OMPdecase [H]

EC number: =4.1.2.43 [H]

Molecular weight: Translated: 23307; Mature: 23307

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTVNQMPPQIAPALVARMEKVEVATVGHFLHSGFPDRDLRAVLPEKRVAGTAVTVRLPH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEEEECC
ADSTILHYLTKLVRPGDFIIVDRCGDTKHACWGGVVTHAMKLGGIVGAAIDGPATDFSEI
CCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHH
RRVELPMWCRGPAPITTKILGLEGAINVPVSLGGHTVHPGDAVIADESGLVILPPERAEW
HEECCCEEECCCCCCEEEEEECCCCEECCEECCCEEECCCCEEEECCCCEEEECCCCHHH
ATEKALGMQEAELVLLDRLRKGEWLPDISGATKLVEA
HHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHCC
>Mature Secondary Structure
MFTVNQMPPQIAPALVARMEKVEVATVGHFLHSGFPDRDLRAVLPEKRVAGTAVTVRLPH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEEEECC
ADSTILHYLTKLVRPGDFIIVDRCGDTKHACWGGVVTHAMKLGGIVGAAIDGPATDFSEI
CCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHH
RRVELPMWCRGPAPITTKILGLEGAINVPVSLGGHTVHPGDAVIADESGLVILPPERAEW
HEECCCEEECCCCCCEEEEEECCCCEECCEECCCEEECCCCEEEECCCCEEEECCCCHHH
ATEKALGMQEAELVLLDRLRKGEWLPDISGATKLVEA
HHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA