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The map label for this gene is dgoA [C]

Identifier: 77465386

GI number: 77465386

Start: 447238

End: 448401

Strand: Reverse

Name: dgoA [C]

Synonym: RSP_3384

Alternate gene names: 77465386

Gene position: 448401-447238 (Counterclockwise)

Preceding gene: 77465387

Following gene: 77465385

Centisome position: 47.55

GC content: 67.53

Gene sequence:

>1164_bases
ATGCGCATCCTCGATATCGTCGAATCCACGCAGCCCATCTCGTCGCCGATCCGCAACGCCTACATCGACTTCAGCCGGAT
GACGGCCAGCCTCGTGGCGGTGGTGACGGATGTGGTGCGCGACGGCCGGCGTGTCGTGGGCTACGGCTTCAACTCGAACG
GCCGCTACGGGCAGGGCGGGCTGATCCGCGAGCGCTTCCGCGACCGGATCCTCGAAGCCCCGCCCGAGAGCCTGCTGACG
GAAGCGGGCGACAATCTCGATCCGCACCGGATCTGGGCCGCGATGATGAGCAACGAGAAGCCGGGCGGCCATGGCGAACG
GTCGGTCGCGGTCGGAACGCTCGACATGGCGGTGTGGGATGCGGTGGCCAAGATCGCGGGCCAGCCGCTCTTCCGCCTGC
TGGCCCATGCGAAGGGGCGCGAGGCCGATCCGCGCGTCTTCGTCTATGCGGCGGGCGGCTACTATTATCCCGGCAAGGAC
GATGCGGCGCTGAGGCGCGAGATGCGCAGCTACCTCGACCGCGGCTATACCGTGGTCAAGATGAAGATCGGCGGGGCCCC
GCTCGACGAGGATCGCCGCCGGATCGAGGCGGTGCTTCAGGAGATCGGGCCGCAGGCGCGCCTCGCGGTGGATGCCAACG
GGCGCTTCGATCTGGAGACGGCCATCGCCTATGCGAAGATGCTCAGGGACTATCCGCTGTTCTGGTATGAGGAGGCGGGC
GATCCCCTCGACTATGCGCTTCAGGCGGCGCTGGCCGAGTTCTATCCGGGGCCGATGGCGACCGGCGAGAACCTCTTCTC
GCATCAGGATGCGCGCAACCTCCTGCGTTACGGGGGCATGCGGGCCGACCGCGACTGGCTGCAGTTCGATTGCGCGCTGT
CCTACGGGCTGGTCGAGTATCTGCGGACGCTCGAGGTGCTGGAAAGCTGCGGCTGGTCGTCCCGGCGCTGCATCCCGCAT
GGCGGCCACCAGATGTCGCTGAACATCGCCGCGGGCCTCGGCCTCGGCGGGAACGAGAGCTATCCCGATCTCTTCCAGCC
CTATGGCGGCTTTCCCGACACGGTGAAGGTGGTCGACGGCCATATCACCATGCCCGACCTGCCGGGCATCGGCTTCGAGG
GCAAGTCCGACCTCATCCGGGTGATGCGGGCGCTGGCCGAGTAG

Upstream 100 bases:

>100_bases
CGGCCACCGCCCGTGCCTGATCCCCACGGGCTCGCGGGGCAGACCCGGCGCCGCCCGGCCCGGAGGGGCCTCACCTGACC
AGAAGCGAAAGGACGACCTC

Downstream 100 bases:

>100_bases
CCGCTCGTCCGGCGCGGGCGCCGGGGCTGCGTTTTCCGGCGCGCCTCGCCCCAGGCCGGAGGGTCTGCGCCTGCCGGATC
CGGGGCCGGCGGGCCAGGCC

Product: mandelate racemase/muconate lactonizing enzyme family protein

Products: Glyceraldehyde 3-phosphate; Pyruvate [C]

Alternate protein names: Mandelate Racemase; Mandelate Racemase/Muconate Lactonizing; Mandelate Racemase/Muconate Lactonizing-Like Protein; Galactonate Dehydratase; Racemase; Mandelate Racemase/Muconate Lactonizing Family Protein; Uroporphyrinogen Decarboxylase HemE; Mandelate Racemase/Muconate Lactonizing Family Protein; Mandelate Racemase/Muconate Lactonizing -Like Protein; L-Alanine-DL-Glutamate Epimerase; Hypothethical Protein Enolase Domain; Mandelate Racemase/Gluconate Dehydratase; Mandelate Racemase/Muconate Lactonizing Protein; Mandelate Racemase / Muconate Lactonizing Family; DgoA Protein; Mandelate Racemase/Muconate Lactonizing C- Domain Protein; Enolase; Mandelate Racemase/Muconate Lactonizing Domain Protein; Phosphopyruvate Hydratase; RTS Beta Protein; Mandelate Racemase / L-Alanine-DL-Glutamate Epimerase

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MRILDIVESTQPISSPIRNAYIDFSRMTASLVAVVTDVVRDGRRVVGYGFNSNGRYGQGGLIRERFRDRILEAPPESLLT
EAGDNLDPHRIWAAMMSNEKPGGHGERSVAVGTLDMAVWDAVAKIAGQPLFRLLAHAKGREADPRVFVYAAGGYYYPGKD
DAALRREMRSYLDRGYTVVKMKIGGAPLDEDRRRIEAVLQEIGPQARLAVDANGRFDLETAIAYAKMLRDYPLFWYEEAG
DPLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRADRDWLQFDCALSYGLVEYLRTLEVLESCGWSSRRCIPH
GGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDTVKVVDGHITMPDLPGIGFEGKSDLIRVMRALAE

Sequences:

>Translated_387_residues
MRILDIVESTQPISSPIRNAYIDFSRMTASLVAVVTDVVRDGRRVVGYGFNSNGRYGQGGLIRERFRDRILEAPPESLLT
EAGDNLDPHRIWAAMMSNEKPGGHGERSVAVGTLDMAVWDAVAKIAGQPLFRLLAHAKGREADPRVFVYAAGGYYYPGKD
DAALRREMRSYLDRGYTVVKMKIGGAPLDEDRRRIEAVLQEIGPQARLAVDANGRFDLETAIAYAKMLRDYPLFWYEEAG
DPLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRADRDWLQFDCALSYGLVEYLRTLEVLESCGWSSRRCIPH
GGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDTVKVVDGHITMPDLPGIGFEGKSDLIRVMRALAE
>Mature_387_residues
MRILDIVESTQPISSPIRNAYIDFSRMTASLVAVVTDVVRDGRRVVGYGFNSNGRYGQGGLIRERFRDRILEAPPESLLT
EAGDNLDPHRIWAAMMSNEKPGGHGERSVAVGTLDMAVWDAVAKIAGQPLFRLLAHAKGREADPRVFVYAAGGYYYPGKD
DAALRREMRSYLDRGYTVVKMKIGGAPLDEDRRRIEAVLQEIGPQARLAVDANGRFDLETAIAYAKMLRDYPLFWYEEAG
DPLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRADRDWLQFDCALSYGLVEYLRTLEVLESCGWSSRRCIPH
GGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDTVKVVDGHITMPDLPGIGFEGKSDLIRVMRALAE

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG4948

COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.1.2.21; 4.2.1.6 [C]

Molecular weight: Translated: 42905; Mature: 42905

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILDIVESTQPISSPIRNAYIDFSRMTASLVAVVTDVVRDGRRVVGYGFNSNGRYGQGG
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC
LIRERFRDRILEAPPESLLTEAGDNLDPHRIWAAMMSNEKPGGHGERSVAVGTLDMAVWD
HHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH
AVAKIAGQPLFRLLAHAKGREADPRVFVYAAGGYYYPGKDDAALRREMRSYLDRGYTVVK
HHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHCCEEEEE
MKIGGAPLDEDRRRIEAVLQEIGPQARLAVDANGRFDLETAIAYAKMLRDYPLFWYEEAG
EEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECCCC
DPLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRADRDWLQFDCALSYGLVEY
CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LRTLEVLESCGWSSRRCIPHGGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDTVKVVDG
HHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHCCCCCCCCEEEEEC
HITMPDLPGIGFEGKSDLIRVMRALAE
EEECCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRILDIVESTQPISSPIRNAYIDFSRMTASLVAVVTDVVRDGRRVVGYGFNSNGRYGQGG
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC
LIRERFRDRILEAPPESLLTEAGDNLDPHRIWAAMMSNEKPGGHGERSVAVGTLDMAVWD
HHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHH
AVAKIAGQPLFRLLAHAKGREADPRVFVYAAGGYYYPGKDDAALRREMRSYLDRGYTVVK
HHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHCCEEEEE
MKIGGAPLDEDRRRIEAVLQEIGPQARLAVDANGRFDLETAIAYAKMLRDYPLFWYEEAG
EEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECCCC
DPLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRADRDWLQFDCALSYGLVEY
CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LRTLEVLESCGWSSRRCIPHGGHQMSLNIAAGLGLGGNESYPDLFQPYGGFPDTVKVVDG
HHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHCCCCCCCCEEEEEC
HITMPDLPGIGFEGKSDLIRVMRALAE
EEECCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-Dehydro-3-deoxy-D-galactonate 6-phosphate [C]

Specific reaction: 2-Dehydro-3-deoxy-D-galactonate 6-phosphate <==> Glyceraldehyde 3-phosphate + Pyruvate [C]

General reaction: elimination of H2O C-O bond; Cleavage [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA