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The map label for this gene is oxaA [H]

Identifier: 77461960

GI number: 77461960

Start: 6435926

End: 6437608

Strand: Reverse

Name: oxaA [H]

Synonym: Pfl01_5743

Alternate gene names: 77461960

Gene position: 6437608-6435926 (Counterclockwise)

Preceding gene: 77461961

Following gene: 77461959

Centisome position: 99.99

GC content: 56.39

Gene sequence:

>1683_bases
ATGGATATCAAACGCACGATCCTGATCGTCGCCCTGGCAATCGTGTCCTACGTCATGGTCCTTAAATGGAACCAGGACTA
CGGCCAGGCTGCCCTGCCGACTCAGAATGTTGCTTCCAGTACGACTACATCCGGTTTGCCGGACACCGCCACTGGCAATA
ACGCTGCCGCCAGTGACGATATTCCGCGCGCCGCAAGCGATACCAGCGCACCTGCCGAAACGCCGGTCGCCGCCAGCAAG
GATCTGATCCAGATCAAGACCGACGTGCTCGATCTGTCGATCGATCCACAAGGTGGTGATGTTGCCCAACTGACCTTGCC
GCTGTATCCGCGCCGTCAGGATCGTCCGGACGTTCCGTTCCAGTTGTTCGACAACGGTGGCGAACGTACTTATCTGGCAC
AGAGCGGTCTGATTGGCACCAACGGTCCGGATGCAAACCCGGCCGGTCGTCCGATCTACTCCTCGGAGAAGAAGACTTAT
CAACTGGCTGACGGTCAGGACAAACTGGTCGTTGACCTGAAGTTCAGCAAGGACGGCGTCAATTACATCAAGCGTTTCAC
TCTGAAACGTGGCCTGTATGACGTGACCGTGACCTATCTGATCGACAACCAGAGCGCTCAGCCTTGGTCCGGTTCGATGT
TCGCCCAGCTGAAACGCGACGCCAGCGCCGATCCTTCTTCCACGACTGCTACCGGTACCGCGACCTACCTGGGTGCTGCC
CTGTGGACAAGTTCCGAGCCGTACAAGAAAGTGTCCATGAAGGACATGGACAAAGCTCAGCTCAAGGAGACCGTCACCGG
TGGCTGGGTAGCCTGGCTGCAACACTACTTCGTGACTGCATGGGTTGCTCCGAAGGGCGAAAACAACATCGTCCAGACCC
GTAAAGACAGCAAAGGCAACTACATCATCGGTTACACCGGTCCTTCGTTGACCGCTGCACCGGGTGCGAAAGTCGAGACC
AGCGCTGTTCTTTACGCCGGTCCGAAAAGCCAGGCGGTGCTGAAAGAGTTGTCCCCAGGTCTGGAACTGACTGTCGACTA
CGGCATTCTGTGGTTCATTGCCCAGCCAATCTTCTGGCTGCTGCAACATATCCACAGCATCGTCGGCAACTGGGGCTGGT
CGATCATCTTCCTGACCATGCTGATCAAAGGGATTTTCTTCCCTCTGTCGGCCGCCAGCTACAAGTCGATGGCCCGCATG
CGCGCCGTGGCTCCGAAACTGGCTGCACTGAAAGAGCAACATGGCGATGACCGGCAGAAAATGTCGCAAGCCATGATGGA
GCTGTATAAGAAAGAGAAGATCAATCCGCTGGGCGGCTGCTTGCCGATCCTGGTGCAGATGCCGGTTTTCCTTTCCCTGT
ACTGGGTTCTGCTGGAAAGCGTGGAAATGCGCCAGGCGCCGTTCATGCTGTGGATTACCGACCTGTCGATCAAGGATCCG
TTCTTCATCCTGCCGATCATCATGGGCGCGACCATGTTCATCCAGCAGCGTCTGAACCCTACACCTCCGGATCCGATGCA
GGCCAAGGTGATGAAAATGATGCCAATCATCTTCACCTTCTTCTTCCTGTGGTTCCCGGCAGGTCTGGTGCTGTACTGGG
TTGTGAACAACTGCCTGTCGATTGCCCAACAGTGGTACATCACGCGTAAGATCGAAGCGGCGACGAAAAAAGCCGAGGCG
TAA

Upstream 100 bases:

>100_bases
CCTTTCGTCGTTTAGGTCGCTGTCATCCGTGGAATCCCGGTGGTTATGACCCGGTTCCACCTATCCCTACCTCCCGTTCT
TCTTCGATGGCCGAGTAATC

Downstream 100 bases:

>100_bases
CTTACTCTGTGGATAACACCACTCAAAACGCCCCCTAGTGGGGCGTTTTGCTATCTGCCATTTTTGTTCTGGATACCGGT
TTATGAGCGCACCTCGTGAA

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MDIKRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVASSTTTSGLPDTATGNNAAASDDIPRAASDTSAPAETPVAASK
DLIQIKTDVLDLSIDPQGGDVAQLTLPLYPRRQDRPDVPFQLFDNGGERTYLAQSGLIGTNGPDANPAGRPIYSSEKKTY
QLADGQDKLVVDLKFSKDGVNYIKRFTLKRGLYDVTVTYLIDNQSAQPWSGSMFAQLKRDASADPSSTTATGTATYLGAA
LWTSSEPYKKVSMKDMDKAQLKETVTGGWVAWLQHYFVTAWVAPKGENNIVQTRKDSKGNYIIGYTGPSLTAAPGAKVET
SAVLYAGPKSQAVLKELSPGLELTVDYGILWFIAQPIFWLLQHIHSIVGNWGWSIIFLTMLIKGIFFPLSAASYKSMARM
RAVAPKLAALKEQHGDDRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFMLWITDLSIKDP
FFILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRKIEAATKKAEA

Sequences:

>Translated_560_residues
MDIKRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVASSTTTSGLPDTATGNNAAASDDIPRAASDTSAPAETPVAASK
DLIQIKTDVLDLSIDPQGGDVAQLTLPLYPRRQDRPDVPFQLFDNGGERTYLAQSGLIGTNGPDANPAGRPIYSSEKKTY
QLADGQDKLVVDLKFSKDGVNYIKRFTLKRGLYDVTVTYLIDNQSAQPWSGSMFAQLKRDASADPSSTTATGTATYLGAA
LWTSSEPYKKVSMKDMDKAQLKETVTGGWVAWLQHYFVTAWVAPKGENNIVQTRKDSKGNYIIGYTGPSLTAAPGAKVET
SAVLYAGPKSQAVLKELSPGLELTVDYGILWFIAQPIFWLLQHIHSIVGNWGWSIIFLTMLIKGIFFPLSAASYKSMARM
RAVAPKLAALKEQHGDDRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFMLWITDLSIKDP
FFILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRKIEAATKKAEA
>Mature_560_residues
MDIKRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVASSTTTSGLPDTATGNNAAASDDIPRAASDTSAPAETPVAASK
DLIQIKTDVLDLSIDPQGGDVAQLTLPLYPRRQDRPDVPFQLFDNGGERTYLAQSGLIGTNGPDANPAGRPIYSSEKKTY
QLADGQDKLVVDLKFSKDGVNYIKRFTLKRGLYDVTVTYLIDNQSAQPWSGSMFAQLKRDASADPSSTTATGTATYLGAA
LWTSSEPYKKVSMKDMDKAQLKETVTGGWVAWLQHYFVTAWVAPKGENNIVQTRKDSKGNYIIGYTGPSLTAAPGAKVET
SAVLYAGPKSQAVLKELSPGLELTVDYGILWFIAQPIFWLLQHIHSIVGNWGWSIIFLTMLIKGIFFPLSAASYKSMARM
RAVAPKLAALKEQHGDDRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFMLWITDLSIKDP
FFILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFPAGLVLYWVVNNCLSIAQQWYITRKIEAATKKAEA

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=560, Percent_Identity=45, Blast_Score=467, Evalue=1e-133,
Organism=Drosophila melanogaster, GI24662345, Length=192, Percent_Identity=28.6458333333333, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21356443, Length=192, Percent_Identity=28.6458333333333, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 61956; Mature: 61956

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVASSTTTSGLPDTATGNNAAASDD
CCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC
IPRAASDTSAPAETPVAASKDLIQIKTDVLDLSIDPQGGDVAQLTLPLYPRRQDRPDVPF
CCCCCCCCCCCCCCCCCCCCCHHEEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCE
QLFDNGGERTYLAQSGLIGTNGPDANPAGRPIYSSEKKTYQLADGQDKLVVDLKFSKDGV
EEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCHH
NYIKRFTLKRGLYDVTVTYLIDNQSAQPWSGSMFAQLKRDASADPSSTTATGTATYLGAA
HHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
LWTSSEPYKKVSMKDMDKAQLKETVTGGWVAWLQHYFVTAWVAPKGENNIVQTRKDSKGN
HHCCCCCCHHCCHHHCHHHHHHHHHCHHHHHHHHHHHHEEEECCCCCCCCEECCCCCCCC
YIIGYTGPSLTAAPGAKVETSAVLYAGPKSQAVLKELSPGLELTVDYGILWFIAQPIFWL
EEEEECCCCCCCCCCCCEECCEEEEECCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH
LQHIHSIVGNWGWSIIFLTMLIKGIFFPLSAASYKSMARMRAVAPKLAALKEQHGDDRQK
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
MSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFMLWITDLSIKDP
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
FFILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFPAGLVLYWVVNNCLS
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAQQWYITRKIEAATKKAEA
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDIKRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVASSTTTSGLPDTATGNNAAASDD
CCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC
IPRAASDTSAPAETPVAASKDLIQIKTDVLDLSIDPQGGDVAQLTLPLYPRRQDRPDVPF
CCCCCCCCCCCCCCCCCCCCCHHEEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCE
QLFDNGGERTYLAQSGLIGTNGPDANPAGRPIYSSEKKTYQLADGQDKLVVDLKFSKDGV
EEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCHH
NYIKRFTLKRGLYDVTVTYLIDNQSAQPWSGSMFAQLKRDASADPSSTTATGTATYLGAA
HHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
LWTSSEPYKKVSMKDMDKAQLKETVTGGWVAWLQHYFVTAWVAPKGENNIVQTRKDSKGN
HHCCCCCCHHCCHHHCHHHHHHHHHCHHHHHHHHHHHHEEEECCCCCCCCEECCCCCCCC
YIIGYTGPSLTAAPGAKVETSAVLYAGPKSQAVLKELSPGLELTVDYGILWFIAQPIFWL
EEEEECCCCCCCCCCCCEECCEEEEECCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH
LQHIHSIVGNWGWSIIFLTMLIKGIFFPLSAASYKSMARMRAVAPKLAALKEQHGDDRQK
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
MSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFMLWITDLSIKDP
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
FFILPIIMGATMFIQQRLNPTPPDPMQAKVMKMMPIIFTFFFLWFPAGLVLYWVVNNCLS
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAQQWYITRKIEAATKKAEA
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA