| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is mhpT [H]
Identifier: 77461931
GI number: 77461931
Start: 6400934
End: 6402154
Strand: Reverse
Name: mhpT [H]
Synonym: Pfl01_5712
Alternate gene names: 77461931
Gene position: 6402154-6400934 (Counterclockwise)
Preceding gene: 77461932
Following gene: 77461930
Centisome position: 99.44
GC content: 64.37
Gene sequence:
>1221_bases ATGAGTGAACAGGCAATCGGCACGGCGACACCCAGGACCTCGACAGATCGTGCCGCGTGGACTGTGGTGGGACTGTGCAT GCTATTCAATGTAATCGACGGCCTGGATGCGATGGTCATGGTGTTCACGGTGCACCGCGTGGCGGCGCTGTGGTCATTGA GCGCGGCCCAGATGGGCCTGCTGCTCAGCGCCAGTCTGGTGGGCATGGCAGCCGGCTCGTTGTGTGTCGGTGCGATGACG CAGCGCTTCGGGCGGCGTCCCGTTGTGCTGGCCAGCCTGGCGCTCAGCGGCATGACAATGCTATTGGGGTTCTGGAGTCA GGAGCTTTACAGCCTGCTATGCCTGCGTATGCTCACCGGTCTCGGCGTGGGCGCTGTACTGGTGTGCGCCAACGTACTCA CCCACGACCATGCGCCACCGCGCCATCGCAGCCTCGGGATTGCCCTGCAATCCGTGGCCTTTGCCCTGGGCGTGACCCTG GGCGGTCTGCTTGCGCATCGGCTCAACGACAGCCTCGGCTGGCGTTATGTGTTTCTGGCCGGGGGAGTGCTGACGTTGCT CTTGGCTGCGATCGGCGCGCGATGGCTGCGTGAGTCCGCCTCACCGCTGGCGGTCGAAAAGACTGCCCCGCGCTATCGCG ATCTGATCAGCCGCGCGCGCTGGCAGTCGACCTGCACCCTGGCGGTCGTGTGTTTCTTGCTGATGTTCGGTTTTTACTTC GTGATGAGCTGGACGCCCATGCTGCTAACACTGGGAGGCTTTTCCGAACGGCACGGCATCACGGGCGGCATGCTGCTTAC TATCGGCGGTATGTGCGGCGCATTGCTGCTAGGCCTTGGTGCCAATCGCCTGGGCTGCCATCGGTTGCTGGGGGCGGGGC TGCTGCTGAATGCCTTGCTGATGCTGTCGATGGTCTCGGCCGCCCATGTCCCGGTGTTGGCAGTAGTGATGGGGTTTACG GTGGGGTTTTCGCTGTACGCCGCCATCGCCGCGCTGTTCGTGATGGCCCCCCAGGCGTTCGATAGCGCGGTGCGTACTCG GGGCGTGGGCCTGGTGCTGGCTACTGGGCGGCTGGGCGCGATCCTGTCGCCGACGGTAGCCGGTGTGTTGCTCGACGCCC AGTGGCGCCCTCAAGACCTGTTCACCTTCTATGCGGGCACCCAACTGTTGGCCGTTCTGCTGATCGGGCGAAACCGTCGG CCTACGCCTGAGGCAGGATGA
Upstream 100 bases:
>100_bases TCCCGTTGCACGAAGATGCCGATCGATACCTTTGTATGACTTGCCAGCGTCGTCGCCCGTTGCTGCCATCCACTTTCGAT AAGAACAGGACCCGCTACAT
Downstream 100 bases:
>100_bases TCAGCTTGCCCGTCGTCCGGCGCGACTCGATATCCCGATGGGCCTGATGCGCCTGCACCAAGGGGGTAACGCTGGCCGAT ACTGACGTTGAGCCTGCCAG
Product: general substrate transporter
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MSEQAIGTATPRTSTDRAAWTVVGLCMLFNVIDGLDAMVMVFTVHRVAALWSLSAAQMGLLLSASLVGMAAGSLCVGAMT QRFGRRPVVLASLALSGMTMLLGFWSQELYSLLCLRMLTGLGVGAVLVCANVLTHDHAPPRHRSLGIALQSVAFALGVTL GGLLAHRLNDSLGWRYVFLAGGVLTLLLAAIGARWLRESASPLAVEKTAPRYRDLISRARWQSTCTLAVVCFLLMFGFYF VMSWTPMLLTLGGFSERHGITGGMLLTIGGMCGALLLGLGANRLGCHRLLGAGLLLNALLMLSMVSAAHVPVLAVVMGFT VGFSLYAAIAALFVMAPQAFDSAVRTRGVGLVLATGRLGAILSPTVAGVLLDAQWRPQDLFTFYAGTQLLAVLLIGRNRR PTPEAG
Sequences:
>Translated_406_residues MSEQAIGTATPRTSTDRAAWTVVGLCMLFNVIDGLDAMVMVFTVHRVAALWSLSAAQMGLLLSASLVGMAAGSLCVGAMT QRFGRRPVVLASLALSGMTMLLGFWSQELYSLLCLRMLTGLGVGAVLVCANVLTHDHAPPRHRSLGIALQSVAFALGVTL GGLLAHRLNDSLGWRYVFLAGGVLTLLLAAIGARWLRESASPLAVEKTAPRYRDLISRARWQSTCTLAVVCFLLMFGFYF VMSWTPMLLTLGGFSERHGITGGMLLTIGGMCGALLLGLGANRLGCHRLLGAGLLLNALLMLSMVSAAHVPVLAVVMGFT VGFSLYAAIAALFVMAPQAFDSAVRTRGVGLVLATGRLGAILSPTVAGVLLDAQWRPQDLFTFYAGTQLLAVLLIGRNRR PTPEAG >Mature_405_residues SEQAIGTATPRTSTDRAAWTVVGLCMLFNVIDGLDAMVMVFTVHRVAALWSLSAAQMGLLLSASLVGMAAGSLCVGAMTQ RFGRRPVVLASLALSGMTMLLGFWSQELYSLLCLRMLTGLGVGAVLVCANVLTHDHAPPRHRSLGIALQSVAFALGVTLG GLLAHRLNDSLGWRYVFLAGGVLTLLLAAIGARWLRESASPLAVEKTAPRYRDLISRARWQSTCTLAVVCFLLMFGFYFV MSWTPMLLTLGGFSERHGITGGMLLTIGGMCGALLLGLGANRLGCHRLLGAGLLLNALLMLSMVSAAHVPVLAVVMGFTV GFSLYAAIAALFVMAPQAFDSAVRTRGVGLVLATGRLGAILSPTVAGVLLDAQWRPQDLFTFYAGTQLLAVLLIGRNRRP TPEAG
Specific function: Could be a transporter for 3-phenylpropionate (hydrocinnamic acid) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=393, Percent_Identity=23.9185750636132, Blast_Score=73, Evalue=4e-13, Organism=Escherichia coli, GI87081723, Length=351, Percent_Identity=31.9088319088319, Blast_Score=142, Evalue=4e-35, Organism=Escherichia coli, GI87082404, Length=379, Percent_Identity=22.1635883905013, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1786229, Length=362, Percent_Identity=22.9281767955801, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI87082159, Length=380, Percent_Identity=24.2105263157895, Blast_Score=68, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6319718, Length=158, Percent_Identity=29.746835443038, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42932; Mature: 42801
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQAIGTATPRTSTDRAAWTVVGLCMLFNVIDGLDAMVMVFTVHRVAALWSLSAAQMGL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLSASLVGMAAGSLCVGAMTQRFGRRPVVLASLALSGMTMLLGFWSQELYSLLCLRMLTG HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LGVGAVLVCANVLTHDHAPPRHRSLGIALQSVAFALGVTLGGLLAHRLNDSLGWRYVFLA CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHH GGVLTLLLAAIGARWLRESASPLAVEKTAPRYRDLISRARWQSTCTLAVVCFLLMFGFYF HHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMSWTPMLLTLGGFSERHGITGGMLLTIGGMCGALLLGLGANRLGCHRLLGAGLLLNALL HHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH MLSMVSAAHVPVLAVVMGFTVGFSLYAAIAALFVMAPQAFDSAVRTRGVGLVLATGRLGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEECCCCCC ILSPTVAGVLLDAQWRPQDLFTFYAGTQLLAVLLIGRNRRPTPEAG HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SEQAIGTATPRTSTDRAAWTVVGLCMLFNVIDGLDAMVMVFTVHRVAALWSLSAAQMGL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLSASLVGMAAGSLCVGAMTQRFGRRPVVLASLALSGMTMLLGFWSQELYSLLCLRMLTG HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LGVGAVLVCANVLTHDHAPPRHRSLGIALQSVAFALGVTLGGLLAHRLNDSLGWRYVFLA CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHH GGVLTLLLAAIGARWLRESASPLAVEKTAPRYRDLISRARWQSTCTLAVVCFLLMFGFYF HHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMSWTPMLLTLGGFSERHGITGGMLLTIGGMCGALLLGLGANRLGCHRLLGAGLLLNALL HHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH MLSMVSAAHVPVLAVVMGFTVGFSLYAAIAALFVMAPQAFDSAVRTRGVGLVLATGRLGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEECCCCCC ILSPTVAGVLLDAQWRPQDLFTFYAGTQLLAVLLIGRNRRPTPEAG HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]