| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461913
Identifier: 77461913
GI number: 77461913
Start: 6379696
End: 6380967
Strand: Reverse
Name: 77461913
Synonym: Pfl01_5693
Alternate gene names: NA
Gene position: 6380967-6379696 (Counterclockwise)
Preceding gene: 77461914
Following gene: 77461911
Centisome position: 99.11
GC content: 45.83
Gene sequence:
>1272_bases ATGAATAAGCTGTTTGGCACATTTGATATGGACACTTCAATAACAAAATCTGTCCGTGTTTCTGACTCCAAGCTCCAGAC GAGAATGGCAGCTGAGTCAGCTTCGTTTGAACCTGTAGAACAAGTACATGACTACAACGTTCAAAATAATATTCGTCAAT TGTATGGCAAGCCAGGAATTAGTAATGCAGTTATAGGTGGGCATCCAGATTTTGATCACCTGGTCGAGTCGCGAACACGG GAAAAAGGGTTCGTTACGTCCCTATTTGTGGACATACAAGGCTCGACCCGATTGGGTGTGTACTACTCGCCTGAAATGGT TTTTTACTTCAAAAATCAGATTATAAAGTGCGCCATTGAATGTGTACTTGCGTTTGATGGGCACGTTCACCGGATCATGG GTGACGCTGTACTGGCCTTTTTTCGAGGAAAAGGAAGTGCGAACAACAGCGCGATCGATGCAATAAACTGCGGAGCCGTG CTTGTCCAATATATTCGTGAAGAAGTCGTTCCAAAACTGCGCGAGCGTGGCTTGGCTGAGGACGTCGGAATAAGAGTTGG CATTGATTATGGCTCTCATGAACAAGTGCTTTGGGGCATGTACGGTTATGCTGGCGTCTCTGAGGTAACTGCTACATCAT TCCATGTCGATGTAGCGGCAAAACTTCAGCAAAGCGCCCCTCGCAATCGAGTAATGCTGGGACAATCCATAGTCGAACTG TTGGATTTGCATGATGAGGTCATTGAAGTAAAGCGAGCTATGAGTGGTGGGGAAAAAACCAATCTGCCATTTGTTTCGCC GAACTATAAGGACGTAAATGGACGTCCAATGAACTATCGACAGTACGTTCTTTCTCAGGACAGATACAGTGCACTCCTTC CGTATCCGGAGGATGCGGATGACCCGATCCGGATAACAAGCACTATAAAGCGTGAGGCGGGCATACAATCAGACGACCAT TACTTCAAGTGCTCTCGATCAGTTCCATTGCGGCAAGGTATTGAGTTTAAGGCCCTATTTTTTCCTGTTACTCAGGCTGA AAAAGTAGAGGTGAGATTTCGCGTAGAGAATAACGGAAAGCAAGCTGAAGCTGCTGTAAATAACGGGAATCATGACACGA AGGTTCCAGCGAAGAGGCGCGACAATGGCCAATATTTCGCGAGGCACTGGGAGCGTTCTTCCTATCTTGGCTTGCACTAT ATGTTTATTTCAGTTTATGAAGATGATGTTCTCACTCATCGCGAGCAAAGATACAGCCTATTTATAGGGTAA
Upstream 100 bases:
>100_bases TCGCAAGGGCGGCGATCCTAACCGTATGGAATTTGGTATTTTTGCTTGGCTTTGGTTTTGTGCAGATTCTTGAGGCTACG GGGTATCATTTATGTCAAGG
Downstream 100 bases:
>100_bases GTTTAAGCAGTCACGGTTTGCAGTTACCTTATGCCCGACAGCGGTGGGGTTTTCTCTCTCTGAGGCTTAGGTTCGATCAA TCGCCTGTCAATGGCAGAGG
Product: putative adenylate/guanylate cyclase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MNKLFGTFDMDTSITKSVRVSDSKLQTRMAAESASFEPVEQVHDYNVQNNIRQLYGKPGISNAVIGGHPDFDHLVESRTR EKGFVTSLFVDIQGSTRLGVYYSPEMVFYFKNQIIKCAIECVLAFDGHVHRIMGDAVLAFFRGKGSANNSAIDAINCGAV LVQYIREEVVPKLRERGLAEDVGIRVGIDYGSHEQVLWGMYGYAGVSEVTATSFHVDVAAKLQQSAPRNRVMLGQSIVEL LDLHDEVIEVKRAMSGGEKTNLPFVSPNYKDVNGRPMNYRQYVLSQDRYSALLPYPEDADDPIRITSTIKREAGIQSDDH YFKCSRSVPLRQGIEFKALFFPVTQAEKVEVRFRVENNGKQAEAAVNNGNHDTKVPAKRRDNGQYFARHWERSSYLGLHY MFISVYEDDVLTHREQRYSLFIG
Sequences:
>Translated_423_residues MNKLFGTFDMDTSITKSVRVSDSKLQTRMAAESASFEPVEQVHDYNVQNNIRQLYGKPGISNAVIGGHPDFDHLVESRTR EKGFVTSLFVDIQGSTRLGVYYSPEMVFYFKNQIIKCAIECVLAFDGHVHRIMGDAVLAFFRGKGSANNSAIDAINCGAV LVQYIREEVVPKLRERGLAEDVGIRVGIDYGSHEQVLWGMYGYAGVSEVTATSFHVDVAAKLQQSAPRNRVMLGQSIVEL LDLHDEVIEVKRAMSGGEKTNLPFVSPNYKDVNGRPMNYRQYVLSQDRYSALLPYPEDADDPIRITSTIKREAGIQSDDH YFKCSRSVPLRQGIEFKALFFPVTQAEKVEVRFRVENNGKQAEAAVNNGNHDTKVPAKRRDNGQYFARHWERSSYLGLHY MFISVYEDDVLTHREQRYSLFIG >Mature_423_residues MNKLFGTFDMDTSITKSVRVSDSKLQTRMAAESASFEPVEQVHDYNVQNNIRQLYGKPGISNAVIGGHPDFDHLVESRTR EKGFVTSLFVDIQGSTRLGVYYSPEMVFYFKNQIIKCAIECVLAFDGHVHRIMGDAVLAFFRGKGSANNSAIDAINCGAV LVQYIREEVVPKLRERGLAEDVGIRVGIDYGSHEQVLWGMYGYAGVSEVTATSFHVDVAAKLQQSAPRNRVMLGQSIVEL LDLHDEVIEVKRAMSGGEKTNLPFVSPNYKDVNGRPMNYRQYVLSQDRYSALLPYPEDADDPIRITSTIKREAGIQSDDH YFKCSRSVPLRQGIEFKALFFPVTQAEKVEVRFRVENNGKQAEAAVNNGNHDTKVPAKRRDNGQYFARHWERSSYLGLHY MFISVYEDDVLTHREQRYSLFIG
Specific function: Unknown
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47835; Mature: 47835
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLFGTFDMDTSITKSVRVSDSKLQTRMAAESASFEPVEQVHDYNVQNNIRQLYGKPGI CCCCCEEECCCCCHHHEEEECHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHCCCCC SNAVIGGHPDFDHLVESRTREKGFVTSLFVDIQGSTRLGVYYSPEMVFYFKNQIIKCAIE CCCEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCEEEEHHHHHHHHHHH CVLAFDGHVHRIMGDAVLAFFRGKGSANNSAIDAINCGAVLVQYIREEVVPKLRERGLAE HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC DVGIRVGIDYGSHEQVLWGMYGYAGVSEVTATSFHVDVAAKLQQSAPRNRVMLGQSIVEL CCCEEEEECCCCCCCEEEEHHCCCCHHHHHHEEEEHHHHHHHHHCCCCCHHHHHHHHHHH LDLHDEVIEVKRAMSGGEKTNLPFVSPNYKDVNGRPMNYRQYVLSQDRYSALLPYPEDAD HHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHHCCCCCCEECCCCCCCC DPIRITSTIKREAGIQSDDHYFKCSRSVPLRQGIEFKALFFPVTQAEKVEVRFRVENNGK CCEEHHHHHHHHCCCCCCCCEEEECCCCCHHCCCCEEEEEEECCCCCEEEEEEEECCCCC QAEAAVNNGNHDTKVPAKRRDNGQYFARHWERSSYLGLHYMFISVYEDDVLTHREQRYSL EEHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEEHHHHHHCCCCCEEE FIG ECC >Mature Secondary Structure MNKLFGTFDMDTSITKSVRVSDSKLQTRMAAESASFEPVEQVHDYNVQNNIRQLYGKPGI CCCCCEEECCCCCHHHEEEECHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHCCCCC SNAVIGGHPDFDHLVESRTREKGFVTSLFVDIQGSTRLGVYYSPEMVFYFKNQIIKCAIE CCCEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCEEEEHHHHHHHHHHH CVLAFDGHVHRIMGDAVLAFFRGKGSANNSAIDAINCGAVLVQYIREEVVPKLRERGLAE HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC DVGIRVGIDYGSHEQVLWGMYGYAGVSEVTATSFHVDVAAKLQQSAPRNRVMLGQSIVEL CCCEEEEECCCCCCCEEEEHHCCCCHHHHHHEEEEHHHHHHHHHCCCCCHHHHHHHHHHH LDLHDEVIEVKRAMSGGEKTNLPFVSPNYKDVNGRPMNYRQYVLSQDRYSALLPYPEDAD HHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHHCCCCCCEECCCCCCCC DPIRITSTIKREAGIQSDDHYFKCSRSVPLRQGIEFKALFFPVTQAEKVEVRFRVENNGK CCEEHHHHHHHHCCCCCCCCEEEECCCCCHHCCCCEEEEEEECCCCCEEEEEEEECCCCC QAEAAVNNGNHDTKVPAKRRDNGQYFARHWERSSYLGLHYMFISVYEDDVLTHREQRYSL EEHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEEHHHHHHCCCCCEEE FIG ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA