| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is purK [H]
Identifier: 77461842
GI number: 77461842
Start: 6294834
End: 6295916
Strand: Reverse
Name: purK [H]
Synonym: Pfl01_5621
Alternate gene names: 77461842
Gene position: 6295916-6294834 (Counterclockwise)
Preceding gene: 77461843
Following gene: 77461841
Centisome position: 97.79
GC content: 62.97
Gene sequence:
>1083_bases ATGAAAATCGGTGTAATCGGTGGCGGCCAGTTGGGTCGCATGTTGGCCCTGGCGGGCACCCCGCTGGGCATGAACTTCGC TTTCCTCGACCCTGCGCCGGACGCTTGCGCCGCTGCGCTGGGCGAACACCTGCGGGCCGATTACGGCGATCAGGATCACC TGCGTCAATTGGCCGATGAAGTCGATCTGGTGACCTTCGAGTTCGAAAGCGTCCCGGCGGAAACCGTGGCGTTCCTTTCG CAGTTCGTGCCGGTCTACCCGAGCGCTGAAGCCCTGCGCATCGCCCGCGACCGCTGGTTCGAAAAGAGCATGTTCAAGGA CCTGGGGATTCCGACCCCAGCGTTCGCCGACATCCAGTCGCAAGCCGACCTGGACGCCGCCGTTGCGTCGATCGGCCTGC CGGCCGTCCTGAAAACCCGCACCCTGGGTTACGACGGCAAGGGCCAGAAAGTCCTGCGCAAGCCGGAAGATGTGGTCGGT ACCTTCGCCGAACTGGGCAGCGTGCCTTGCCTGCTGGAAGGCTTCGTGCCATTCACTGGCGAAGTGTCGCTGATCGCCGT GCGCGCCCGCGATGGCGAGACGAAGTTCTATCCACTGGTGCACAACACCCACGACAGCGGCATCCTCAAGCTGTCGGTCG CCAGCTCCGATCACCCGCTCCAGGCCCTGGCCGAAGATTATTCCAGCCGCGTGCTCAAACAGCTGGATTATGTCGGTGTG ATGGCGTTCGAGTTCTTTGAAGTCGACGGCGGCCTCAAGGCCAACGAAATCGCACCGCGCGTGCACAACTCCGGGCACTG GACCACCGAAGGCGCCGAGTGCAGCCAGTTCGAAAACCACCTGCGGGCCGTTGCCGGTCTGCCGCTGGGTTCGACCGCCA AGGTCGGCGAGAGCGCGATGCTCAACTTCATCGGCGTTGTTCCGCCGGTTGAAAAAGTCATCGCCATCGACGATTGCCAC CTGCATCACTACGGCAAGGCCTTCAAGGCCGGGCGCAAGGTCGGTCACGCCAACCTGCGCTGCAAGGACAAGGCGACCCT CGAGCAACAGATTCTCAAGGTCGAAGCGCTGATCGCCGAGTAA
Upstream 100 bases:
>100_bases AAGCATCCGCAATTCCACGCGGTACTGAAAACCTTCCGTGCCGAGCAGACAGACAGCGTCCTGGACAATCCAGACCCACG TATTGCCTGAGGTTGTTGAG
Downstream 100 bases:
>100_bases CGACAGTTTCATCTGGCAGCGGCGGAACCATTAAGGGGCCGCCGTTCTCTGATGGCAGGATGCGAAAGTCTGGCTAGGCT TCATCGCATATCTACCATTC
Product: phosphoribosylaminoimidazole carboxylase ATPase subunit
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase [H]
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MKIGVIGGGQLGRMLALAGTPLGMNFAFLDPAPDACAAALGEHLRADYGDQDHLRQLADEVDLVTFEFESVPAETVAFLS QFVPVYPSAEALRIARDRWFEKSMFKDLGIPTPAFADIQSQADLDAAVASIGLPAVLKTRTLGYDGKGQKVLRKPEDVVG TFAELGSVPCLLEGFVPFTGEVSLIAVRARDGETKFYPLVHNTHDSGILKLSVASSDHPLQALAEDYSSRVLKQLDYVGV MAFEFFEVDGGLKANEIAPRVHNSGHWTTEGAECSQFENHLRAVAGLPLGSTAKVGESAMLNFIGVVPPVEKVIAIDDCH LHHYGKAFKAGRKVGHANLRCKDKATLEQQILKVEALIAE
Sequences:
>Translated_360_residues MKIGVIGGGQLGRMLALAGTPLGMNFAFLDPAPDACAAALGEHLRADYGDQDHLRQLADEVDLVTFEFESVPAETVAFLS QFVPVYPSAEALRIARDRWFEKSMFKDLGIPTPAFADIQSQADLDAAVASIGLPAVLKTRTLGYDGKGQKVLRKPEDVVG TFAELGSVPCLLEGFVPFTGEVSLIAVRARDGETKFYPLVHNTHDSGILKLSVASSDHPLQALAEDYSSRVLKQLDYVGV MAFEFFEVDGGLKANEIAPRVHNSGHWTTEGAECSQFENHLRAVAGLPLGSTAKVGESAMLNFIGVVPPVEKVIAIDDCH LHHYGKAFKAGRKVGHANLRCKDKATLEQQILKVEALIAE >Mature_360_residues MKIGVIGGGQLGRMLALAGTPLGMNFAFLDPAPDACAAALGEHLRADYGDQDHLRQLADEVDLVTFEFESVPAETVAFLS QFVPVYPSAEALRIARDRWFEKSMFKDLGIPTPAFADIQSQADLDAAVASIGLPAVLKTRTLGYDGKGQKVLRKPEDVVG TFAELGSVPCLLEGFVPFTGEVSLIAVRARDGETKFYPLVHNTHDSGILKLSVASSDHPLQALAEDYSSRVLKQLDYVGV MAFEFFEVDGGLKANEIAPRVHNSGHWTTEGAECSQFENHLRAVAGLPLGSTAKVGESAMLNFIGVVPPVEKVIAIDDCH LHHYGKAFKAGRKVGHANLRCKDKATLEQQILKVEALIAE
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) [H]
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786733, Length=359, Percent_Identity=38.4401114206128, Blast_Score=202, Evalue=2e-53, Organism=Escherichia coli, GI1788155, Length=310, Percent_Identity=25.4838709677419, Blast_Score=91, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6324702, Length=371, Percent_Identity=31.5363881401617, Blast_Score=181, Evalue=1e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp [H]
EC number: =6.3.4.18 [H]
Molecular weight: Translated: 38822; Mature: 38822
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGVIGGGQLGRMLALAGTPLGMNFAFLDPAPDACAAALGEHLRADYGDQDHLRQLADE CEEEEECCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH VDLVTFEFESVPAETVAFLSQFVPVYPSAEALRIARDRWFEKSMFKDLGIPTPAFADIQS HCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH QADLDAAVASIGLPAVLKTRTLGYDGKGQKVLRKPEDVVGTFAELGSVPCLLEGFVPFTG HHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHCCCCEEECCCCCCCC EVSLIAVRARDGETKFYPLVHNTHDSGILKLSVASSDHPLQALAEDYSSRVLKQLDYVGV CEEEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH MAFEFFEVDGGLKANEIAPRVHNSGHWTTEGAECSQFENHLRAVAGLPLGSTAKVGESAM HHHEEEECCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCHHHH LNFIGVVPPVEKVIAIDDCHLHHYGKAFKAGRKVGHANLRCKDKATLEQQILKVEALIAE HHHHCCCCCHHHEEEECCCHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKIGVIGGGQLGRMLALAGTPLGMNFAFLDPAPDACAAALGEHLRADYGDQDHLRQLADE CEEEEECCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH VDLVTFEFESVPAETVAFLSQFVPVYPSAEALRIARDRWFEKSMFKDLGIPTPAFADIQS HCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH QADLDAAVASIGLPAVLKTRTLGYDGKGQKVLRKPEDVVGTFAELGSVPCLLEGFVPFTG HHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHCCCCEEECCCCCCCC EVSLIAVRARDGETKFYPLVHNTHDSGILKLSVASSDHPLQALAEDYSSRVLKQLDYVGV CEEEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH MAFEFFEVDGGLKANEIAPRVHNSGHWTTEGAECSQFENHLRAVAGLPLGSTAKVGESAM HHHEEEECCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCHHHH LNFIGVVPPVEKVIAIDDCHLHHYGKAFKAGRKVGHANLRCKDKATLEQQILKVEALIAE HHHHCCCCCHHHEEEECCCHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8816818; 10984043 [H]