| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is purE [H]
Identifier: 77461843
GI number: 77461843
Start: 6295927
End: 6296418
Strand: Reverse
Name: purE [H]
Synonym: Pfl01_5622
Alternate gene names: 77461843
Gene position: 6296418-6295927 (Counterclockwise)
Preceding gene: 77461845
Following gene: 77461842
Centisome position: 97.79
GC content: 63.01
Gene sequence:
>492_bases ATGAGTGCACTGGTTGGCGTGATCATGGGCTCCAAGTCCGATTGGTCCACCCTTAGCCACACCGCCGATATGCTGGAAAA GCTCGGCATCCCTTACGAGGTCAAGGTGGTTTCCGCCCACCGCACCCCGGATCTGCTGTTCCAGTACGCCGAAGAGGCTG AAGGCCGCGGCATCGAGGTGATCATCGCCGGTGCCGGTGGCGCAGCCCACCTGCCAGGCATGTGTGCGGCCAAAACCCAC CTGCCGGTGCTGGGCGTGCCGGTGCAGTCAGCCATGCTTTCGGGCGTCGACTCGCTGCTTTCGATCGTGCAGATGCCGGC CGGTATTCCGGTTGCCACTCTGGCCATCGGCAAGGCCGGTGCGATCAACGCAGCCCTGCTGTCGGCGAGCATCCTGGGCG CCAAGCATCCGCAATTCCACGCGGTACTGAAAACCTTCCGTGCCGAGCAGACAGACAGCGTCCTGGACAATCCAGACCCA CGTATTGCCTGA
Upstream 100 bases:
>100_bases GCCGGTTCGTCCGGCCATTTTTCCTACAACAAGCCACGCATCCTGCGTGGCTTGTTGTTTTTGACGCGCCTGCGGGCGCC CAGAGAGAAGAGGCGCGACG
Downstream 100 bases:
>100_bases GGTTGTTGAGATGAAAATCGGTGTAATCGGTGGCGGCCAGTTGGGTCGCATGTTGGCCCTGGCGGGCACCCCGCTGGGCA TGAACTTCGCTTTCCTCGAC
Product: phosphoribosylaminoimidazole carboxylase
Products: NA
Alternate protein names: N5-CAIR mutase; 5-(carboxyamino)imidazole ribonucleotide mutase [H]
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSALVGVIMGSKSDWSTLSHTADMLEKLGIPYEVKVVSAHRTPDLLFQYAEEAEGRGIEVIIAGAGGAAHLPGMCAAKTH LPVLGVPVQSAMLSGVDSLLSIVQMPAGIPVATLAIGKAGAINAALLSASILGAKHPQFHAVLKTFRAEQTDSVLDNPDP RIA
Sequences:
>Translated_163_residues MSALVGVIMGSKSDWSTLSHTADMLEKLGIPYEVKVVSAHRTPDLLFQYAEEAEGRGIEVIIAGAGGAAHLPGMCAAKTH LPVLGVPVQSAMLSGVDSLLSIVQMPAGIPVATLAIGKAGAINAALLSASILGAKHPQFHAVLKTFRAEQTDSVLDNPDP RIA >Mature_162_residues SALVGVIMGSKSDWSTLSHTADMLEKLGIPYEVKVVSAHRTPDLLFQYAEEAEGRGIEVIIAGAGGAAHLPGMCAAKTHL PVLGVPVQSAMLSGVDSLLSIVQMPAGIPVATLAIGKAGAINAALLSASILGAKHPQFHAVLKTFRAEQTDSVLDNPDPR IA
Specific function: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) [H]
COG id: COG0041
COG function: function code F; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR carboxylase family [H]
Homologues:
Organism=Escherichia coli, GI1786734, Length=159, Percent_Identity=67.2955974842767, Blast_Score=182, Evalue=8e-48, Organism=Saccharomyces cerevisiae, GI6324702, Length=152, Percent_Identity=54.6052631578947, Blast_Score=155, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: =5.4.99.18 [H]
Molecular weight: Translated: 16828; Mature: 16697
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALVGVIMGSKSDWSTLSHTADMLEKLGIPYEVKVVSAHRTPDLLFQYAEEAEGRGIEV CCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEE IIAGAGGAAHLPGMCAAKTHLPVLGVPVQSAMLSGVDSLLSIVQMPAGIPVATLAIGKAG EEECCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCEEHEECCCCC AINAALLSASILGAKHPQFHAVLKTFRAEQTDSVLDNPDPRIA CHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCC >Mature Secondary Structure SALVGVIMGSKSDWSTLSHTADMLEKLGIPYEVKVVSAHRTPDLLFQYAEEAEGRGIEV CCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEE IIAGAGGAAHLPGMCAAKTHLPVLGVPVQSAMLSGVDSLLSIVQMPAGIPVATLAIGKAG EEECCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCEEHEECCCCC AINAALLSASILGAKHPQFHAVLKTFRAEQTDSVLDNPDPRIA CHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8816818; 10984043 [H]