| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is pstS [H]
Identifier: 77461836
GI number: 77461836
Start: 6289592
End: 6290593
Strand: Reverse
Name: pstS [H]
Synonym: Pfl01_5615
Alternate gene names: 77461836
Gene position: 6290593-6289592 (Counterclockwise)
Preceding gene: 77461837
Following gene: 77461835
Centisome position: 97.7
GC content: 58.48
Gene sequence:
>1002_bases ATGAAACTGAAGCGTTTGATGGCGGCAATGACTTTTGTCGCTGCTGGCGTTGCGACTGCCAACGCGGTTGCCGCTGTTGA CCCTGCTATCCCGAGCTACACCAAGACCACTGGTGTGTCGGGCAACCTGTCCAGCGTCGGTTCCGATACCCTGGCCAACC TCATGACCCTCTGGGCTGAGAACTACAAAAAAGAATACCCGAACGTAAACATCCAGATTCAGGCCGCTGGCTCCGCCACC GCGCCACCTGCGCTGACTGAAGGCACCTCCAACCTGGGCCCGATGAGCCGCAAGATGAAGGACACCGAACTGGCGGCCTT CGAACAGAAATACGGCTACAAGCCAACCGCTATCCCGGTTGCCGTGGACGCCCTGGCTGTTTTCGTGCACAAGGACAACC CGATCCAGCACCTGACCATGGAACAGGTTGACGCGATCTTCTCGTCCACCCGTCTGTGCGGCGCCAAGGCCGACGTGAAA ACCTGGGGTGACCTGGGCGTGACCGGCGACCTGGCCAACAAGCCGGTTCAACTGTTCGGCCGTAACTCGGTATCCGGCAC CTACGGCTACTTCAAGGAAGAAGCCCTGTGCAAAGGCGACTACAAGCCTAACGTCAACGAACAACCAGGCTCGGCTTCGG TCGTGCAGTCGATCAGCTCCTCGCTGAACGGCATCGGTTACTCGGGCATCGGCTACAAGACCGCCAGCGTGAAAACCGTT GCTCTGTCGAAGAAGGGCAGCACTGACTTCATCGAAGACACCGAAGAAAACGCCCTGAACGGCAAATACCCGCTGTCGCG TTTCCTGTACGTGTACGTCAACAAGGCCCCGAACAAGCCTCTGGCCCCGCTGGAAGCCGAGTTCGTGAAACTGGTTCTGT CGAAACAGGGCCAGGAAGTGGTCGTGAAAGACGGCTACATCCCGCTGCCAGCCAAGGTTGCTGCAAAAGCACTGGCTGAC CTGGGTCTGCAGGAAGGCGGCGCTGAAGTCGCAAAAAAGTAA
Upstream 100 bases:
>100_bases TGGCCTTTCATCCAATTGTCATATTTCAGCCATAGAGTGTTCACACGGCCTGCTGATACTTGGCCCCGACTTAACACACC CTATCTGCTAGGAGTAAGGC
Downstream 100 bases:
>100_bases CAAACTGAGTCAGGGGTGAACCACGCCTGACTCCCGTGTGGGGCCCGGCCCGCAAGCGGCCCGGCCCCCACACTCCCCGA ATTCTTCTATCCACTGCCAG
Product: phosphate binding protein
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MKLKRLMAAMTFVAAGVATANAVAAVDPAIPSYTKTTGVSGNLSSVGSDTLANLMTLWAENYKKEYPNVNIQIQAAGSAT APPALTEGTSNLGPMSRKMKDTELAAFEQKYGYKPTAIPVAVDALAVFVHKDNPIQHLTMEQVDAIFSSTRLCGAKADVK TWGDLGVTGDLANKPVQLFGRNSVSGTYGYFKEEALCKGDYKPNVNEQPGSASVVQSISSSLNGIGYSGIGYKTASVKTV ALSKKGSTDFIEDTEENALNGKYPLSRFLYVYVNKAPNKPLAPLEAEFVKLVLSKQGQEVVVKDGYIPLPAKVAAKALAD LGLQEGGAEVAKK
Sequences:
>Translated_333_residues MKLKRLMAAMTFVAAGVATANAVAAVDPAIPSYTKTTGVSGNLSSVGSDTLANLMTLWAENYKKEYPNVNIQIQAAGSAT APPALTEGTSNLGPMSRKMKDTELAAFEQKYGYKPTAIPVAVDALAVFVHKDNPIQHLTMEQVDAIFSSTRLCGAKADVK TWGDLGVTGDLANKPVQLFGRNSVSGTYGYFKEEALCKGDYKPNVNEQPGSASVVQSISSSLNGIGYSGIGYKTASVKTV ALSKKGSTDFIEDTEENALNGKYPLSRFLYVYVNKAPNKPLAPLEAEFVKLVLSKQGQEVVVKDGYIPLPAKVAAKALAD LGLQEGGAEVAKK >Mature_333_residues MKLKRLMAAMTFVAAGVATANAVAAVDPAIPSYTKTTGVSGNLSSVGSDTLANLMTLWAENYKKEYPNVNIQIQAAGSAT APPALTEGTSNLGPMSRKMKDTELAAFEQKYGYKPTAIPVAVDALAVFVHKDNPIQHLTMEQVDAIFSSTRLCGAKADVK TWGDLGVTGDLANKPVQLFGRNSVSGTYGYFKEEALCKGDYKPNVNEQPGSASVVQSISSSLNGIGYSGIGYKTASVKTV ALSKKGSTDFIEDTEENALNGKYPLSRFLYVYVNKAPNKPLAPLEAEFVKLVLSKQGQEVVVKDGYIPLPAKVAAKALAD LGLQEGGAEVAKK
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35225; Mature: 35225
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKRLMAAMTFVAAGVATANAVAAVDPAIPSYTKTTGVSGNLSSVGSDTLANLMTLWAE CCHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHH NYKKEYPNVNIQIQAAGSATAPPALTEGTSNLGPMSRKMKDTELAAFEQKYGYKPTAIPV HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH AVDALAVFVHKDNPIQHLTMEQVDAIFSSTRLCGAKADVKTWGDLGVTGDLANKPVQLFG HHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEC RNSVSGTYGYFKEEALCKGDYKPNVNEQPGSASVVQSISSSLNGIGYSGIGYKTASVKTV CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCEEEE ALSKKGSTDFIEDTEENALNGKYPLSRFLYVYVNKAPNKPLAPLEAEFVKLVLSKQGQEV EEECCCCCCCCCCCHHCCCCCCCCHHEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEE VVKDGYIPLPAKVAAKALADLGLQEGGAEVAKK EEECCCCCCCHHHHHHHHHHCCCCCCCHHHHCC >Mature Secondary Structure MKLKRLMAAMTFVAAGVATANAVAAVDPAIPSYTKTTGVSGNLSSVGSDTLANLMTLWAE CCHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHH NYKKEYPNVNIQIQAAGSATAPPALTEGTSNLGPMSRKMKDTELAAFEQKYGYKPTAIPV HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH AVDALAVFVHKDNPIQHLTMEQVDAIFSSTRLCGAKADVKTWGDLGVTGDLANKPVQLFG HHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEC RNSVSGTYGYFKEEALCKGDYKPNVNEQPGSASVVQSISSSLNGIGYSGIGYKTASVKTV CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCEEEE ALSKKGSTDFIEDTEENALNGKYPLSRFLYVYVNKAPNKPLAPLEAEFVKLVLSKQGQEV EEECCCCCCCCCCCHHCCCCCCCCHHEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEE VVKDGYIPLPAKVAAKALADLGLQEGGAEVAKK EEECCCCCCCHHHHHHHHHHCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA