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The map label for this gene is 77461817

Identifier: 77461817

GI number: 77461817

Start: 6267005

End: 6268567

Strand: Reverse

Name: 77461817

Synonym: Pfl01_5596

Alternate gene names: NA

Gene position: 6268567-6267005 (Counterclockwise)

Preceding gene: 77461821

Following gene: 77461816

Centisome position: 97.36

GC content: 62.0

Gene sequence:

>1563_bases
ATGTCCTACTCAAGCAAACTTTCCGCCCATTACCTCGAACTCGCTAAAGTCTCTGTTTCCAAAGAGAATTTTGCGGGCGA
AGACGTTCGCTTTTCGAGCGAATTCGAGGCGCTGGAAAGCGAGCTGGCCAAAGCCTCGTCGATGCACGAAAGCGGGCAGA
TCGACTGGCTGAAAATTCGCGAAAACAGCGAAAACCTCCTGCGTACCCAATCCAAGGATTTGCGTGTCGGCGCCTGGCTG
ACGTGGTCGCTGTACCAGCGTGAATCCTTCCCCGGCCTGCTGGCCGGCCTCGGTCTGCTGCACCACTTGTCGGAAAACAA
TTGGGCCGAAGTTCACCCGCTCAAACCCCGCACCCGGGCCGCCGCCATCGGCTGGCTGGTGCCGCGTCTTGAGCAGGTCA
TCACCGAGAACATCGCGATCAAGGAACAGCTGCCGATGTTCCGGCAACTGTCCGAGCATCTGTCCGGTCTCGACGCCGCC
TGCACCGAGCATCTGGGCGATGATGCGCCACTGCTGCTGCCGCTTTCCCGCCGTCTGAAAACCATGATCCAGCGCGCCGC
CGACAACCAGCCGGCACCCGGTGTTGTGGGCGCGGCGGTGGCGCAGGTCAAGCAGGCCGCCAGCCAGTTGCTGGCGCCGG
GCGCGCCGATCGACAACGAGAAAGAAGCCCACAAGGCCCTGCGTGCACAGCAGGAAAGCGCCCGCCCGTTGTGCGCCTGG
TGGCTCAAGCAGAAAGCTACCGACCTGCGCGCCCTGCGCCTCAACCGCACCTTGCTGTGGATGACGATCGACGCGGTGCC
CGAGCGCAACGCCGAGCAGATCACCGTGCTGCGCGGGTTGCCGGTCGACAAGCTCAAGCAGTATCAGGACCGTTTCGATC
AGGGCAAATACGCCGACCTGCTGGTGGAACTGGAGGCGAGCCTGGCGAAGGCGCCGTTCTGGTTCGATGGCCAGAGGATG
GTCTGGGAATGTCTCCAGAACCTCAACGCCGAGCTGGCCATGCGCGAAGTGGAAATCCACTTCGCGCTTTTGATTCAACG
CCTGCCCGGCATCATCGAGCTGCGTTTCCATGACGGCGCGCCGTTCGCCGATCCGTCCACCCGGGCGTGGATCGCCGCCA
ACGTCATGCCGCACCTGCAAAGCGCCAGCGCGCCGCGCAAGGTCGAAACCGAAAACGCCGAAACCCAGCCGGCCTGGGAA
AAGGCCCTCGAAGAAGTCCAGCCGATCCTGCGCAAGGAAGGCCTCAAGCCCGCAGTGCAGATCCTCAAGCAGGGGCTGCA
ATCGGCGCACGGCGGGCGCGAACGCTTCTTCTGGCAGTTCGCCCTCGCGCGGCTGTGTTTCCTGGCCAAGAAATACGAAC
TCGCCAAGAACCAGCTCGAAACCCTCGATCAGACATTACAGGACTCAGGCCTGCACGCCTGGGAGCCCGATCTTGCATTG
GAAGTGCTGCACCTGCTGCACAGTTGCTGCGAGTTGTTACCGCAGAACCATGCCGTACGTGAACGCAAGGAAGAGATTTA
TCGCAGGCTGTGCCACCTCGATCTCGAAGTGGTACTCGAATAG

Upstream 100 bases:

>100_bases
AAACACTCAATTGGATGAGTCTTCCGACTGCTCTTCGATACTGTCCCGCGCCGCTGCAACTCCAATAGGCGCACGACCGT
AATCCTAATAAAGGCCATGG

Downstream 100 bases:

>100_bases
GCCCCAGGGCCACAACCGCAAGGAGAAAAGCCATGGCCAAAGAAGGCTCGGTAGCCCCCAAGGAACGCATCAACGTCACC
TTCAAACCCGCCACCGGCGG

Product: ImpA-like protein

Products: NA

Alternate protein names: ImpA Domain-Containing Protein; ImpA-Like; Protein ImpA; ImpA N-Terminal; ImpA Domain Protein; Type VI Secretion Protein VasJ; Conserved Protein; ImpA-Related Domain-Containing Protein; Type VI Secretion-Associated Protein Family; ImpA-Like Protein

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MSYSSKLSAHYLELAKVSVSKENFAGEDVRFSSEFEALESELAKASSMHESGQIDWLKIRENSENLLRTQSKDLRVGAWL
TWSLYQRESFPGLLAGLGLLHHLSENNWAEVHPLKPRTRAAAIGWLVPRLEQVITENIAIKEQLPMFRQLSEHLSGLDAA
CTEHLGDDAPLLLPLSRRLKTMIQRAADNQPAPGVVGAAVAQVKQAASQLLAPGAPIDNEKEAHKALRAQQESARPLCAW
WLKQKATDLRALRLNRTLLWMTIDAVPERNAEQITVLRGLPVDKLKQYQDRFDQGKYADLLVELEASLAKAPFWFDGQRM
VWECLQNLNAELAMREVEIHFALLIQRLPGIIELRFHDGAPFADPSTRAWIAANVMPHLQSASAPRKVETENAETQPAWE
KALEEVQPILRKEGLKPAVQILKQGLQSAHGGRERFFWQFALARLCFLAKKYELAKNQLETLDQTLQDSGLHAWEPDLAL
EVLHLLHSCCELLPQNHAVRERKEEIYRRLCHLDLEVVLE

Sequences:

>Translated_520_residues
MSYSSKLSAHYLELAKVSVSKENFAGEDVRFSSEFEALESELAKASSMHESGQIDWLKIRENSENLLRTQSKDLRVGAWL
TWSLYQRESFPGLLAGLGLLHHLSENNWAEVHPLKPRTRAAAIGWLVPRLEQVITENIAIKEQLPMFRQLSEHLSGLDAA
CTEHLGDDAPLLLPLSRRLKTMIQRAADNQPAPGVVGAAVAQVKQAASQLLAPGAPIDNEKEAHKALRAQQESARPLCAW
WLKQKATDLRALRLNRTLLWMTIDAVPERNAEQITVLRGLPVDKLKQYQDRFDQGKYADLLVELEASLAKAPFWFDGQRM
VWECLQNLNAELAMREVEIHFALLIQRLPGIIELRFHDGAPFADPSTRAWIAANVMPHLQSASAPRKVETENAETQPAWE
KALEEVQPILRKEGLKPAVQILKQGLQSAHGGRERFFWQFALARLCFLAKKYELAKNQLETLDQTLQDSGLHAWEPDLAL
EVLHLLHSCCELLPQNHAVRERKEEIYRRLCHLDLEVVLE
>Mature_519_residues
SYSSKLSAHYLELAKVSVSKENFAGEDVRFSSEFEALESELAKASSMHESGQIDWLKIRENSENLLRTQSKDLRVGAWLT
WSLYQRESFPGLLAGLGLLHHLSENNWAEVHPLKPRTRAAAIGWLVPRLEQVITENIAIKEQLPMFRQLSEHLSGLDAAC
TEHLGDDAPLLLPLSRRLKTMIQRAADNQPAPGVVGAAVAQVKQAASQLLAPGAPIDNEKEAHKALRAQQESARPLCAWW
LKQKATDLRALRLNRTLLWMTIDAVPERNAEQITVLRGLPVDKLKQYQDRFDQGKYADLLVELEASLAKAPFWFDGQRMV
WECLQNLNAELAMREVEIHFALLIQRLPGIIELRFHDGAPFADPSTRAWIAANVMPHLQSASAPRKVETENAETQPAWEK
ALEEVQPILRKEGLKPAVQILKQGLQSAHGGRERFFWQFALARLCFLAKKYELAKNQLETLDQTLQDSGLHAWEPDLALE
VLHLLHSCCELLPQNHAVRERKEEIYRRLCHLDLEVVLE

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58905; Mature: 58774

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYSSKLSAHYLELAKVSVSKENFAGEDVRFSSEFEALESELAKASSMHESGQIDWLKIR
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
ENSENLLRTQSKDLRVGAWLTWSLYQRESFPGLLAGLGLLHHLSENNWAEVHPLKPRTRA
CCCHHHHHHCCCCCEEEEEEEHHHHHHCCCCHHHHHHHHHHHHCCCCCCEECCCCCHHHH
AAIGWLVPRLEQVITENIAIKEQLPMFRQLSEHLSGLDAACTEHLGDDAPLLLPLSRRLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEHHHHHHHH
TMIQRAADNQPAPGVVGAAVAQVKQAASQLLAPGAPIDNEKEAHKALRAQQESARPLCAW
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHH
WLKQKATDLRALRLNRTLLWMTIDAVPERNAEQITVLRGLPVDKLKQYQDRFDQGKYADL
HHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHH
LVELEASLAKAPFWFDGQRMVWECLQNLNAELAMREVEIHFALLIQRLPGIIELRFHDGA
HHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
PFADPSTRAWIAANVMPHLQSASAPRKVETENAETQPAWEKALEEVQPILRKEGLKPAVQ
CCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH
ILKQGLQSAHGGRERFFWQFALARLCFLAKKYELAKNQLETLDQTLQDSGLHAWEPDLAL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
EVLHLLHSCCELLPQNHAVRERKEEIYRRLCHLDLEVVLE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHCC
>Mature Secondary Structure 
SYSSKLSAHYLELAKVSVSKENFAGEDVRFSSEFEALESELAKASSMHESGQIDWLKIR
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
ENSENLLRTQSKDLRVGAWLTWSLYQRESFPGLLAGLGLLHHLSENNWAEVHPLKPRTRA
CCCHHHHHHCCCCCEEEEEEEHHHHHHCCCCHHHHHHHHHHHHCCCCCCEECCCCCHHHH
AAIGWLVPRLEQVITENIAIKEQLPMFRQLSEHLSGLDAACTEHLGDDAPLLLPLSRRLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEHHHHHHHH
TMIQRAADNQPAPGVVGAAVAQVKQAASQLLAPGAPIDNEKEAHKALRAQQESARPLCAW
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHH
WLKQKATDLRALRLNRTLLWMTIDAVPERNAEQITVLRGLPVDKLKQYQDRFDQGKYADL
HHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHH
LVELEASLAKAPFWFDGQRMVWECLQNLNAELAMREVEIHFALLIQRLPGIIELRFHDGA
HHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
PFADPSTRAWIAANVMPHLQSASAPRKVETENAETQPAWEKALEEVQPILRKEGLKPAVQ
CCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH
ILKQGLQSAHGGRERFFWQFALARLCFLAKKYELAKNQLETLDQTLQDSGLHAWEPDLAL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
EVLHLLHSCCELLPQNHAVRERKEEIYRRLCHLDLEVVLE
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA