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The map label for this gene is 77461816

Identifier: 77461816

GI number: 77461816

Start: 6266469

End: 6266972

Strand: Reverse

Name: 77461816

Synonym: Pfl01_5595

Alternate gene names: NA

Gene position: 6266972-6266469 (Counterclockwise)

Preceding gene: 77461817

Following gene: 77461815

Centisome position: 97.34

GC content: 61.31

Gene sequence:

>504_bases
ATGGCCAAAGAAGGCTCGGTAGCCCCCAAGGAACGCATCAACGTCACCTTCAAACCCGCCACCGGCGGTGCTCAGGAAGA
GATTGAACTGCCGCTGAAGCTGCTGGCAATCGGTGACTACACCCACCGCAAGGACGATCGCAAGATCGAGGATCGCAAGC
CGATCAGCATCGACAAGATGACCTTCGACGAAGTGCTGGCCAAGCAAGAGCTGGGTCTGACGCTGAGCGTGCCGAACCGT
CTGCAGGAAGATGGCGAGGCCGACGAGCTGGCTGTGCAACTGCGCGTCAACTCCATGAAGGACTTCAACCCGGCCAGCCT
GGTCGAGCAAGTGCCTGAGCTGAAAAAACTGATGGAACTGCGCGACGCGCTGGTGGCCCTCAAAGGCCCGCTGGGTAACG
CACCTGCGTTCCGTAAAGCCATCGAAGGCGTGCTCGCCGACGACGAATCCCGCGGTCGCGTACTCGGTGAGCTGGGCCTG
AACGCCGCAGCTCCGGACGCTTGA

Upstream 100 bases:

>100_bases
TACGTGAACGCAAGGAAGAGATTTATCGCAGGCTGTGCCACCTCGATCTCGAAGTGGTACTCGAATAGGCCCCAGGGCCA
CAACCGCAAGGAGAAAAGCC

Downstream 100 bases:

>100_bases
GACTCCAGCAGCCAAGGAAGCCAACACAATGAGCACTAGCGCAGCACAACAGAACGCCGCAGAAAACGGCGAGTACAGCA
TCCTCGACAGCATCATCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpB; Cytoplasmic Protein; Type VI Secretion Protein VasQ; Type VI Secretion; Conserved Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MAKEGSVAPKERINVTFKPATGGAQEEIELPLKLLAIGDYTHRKDDRKIEDRKPISIDKMTFDEVLAKQELGLTLSVPNR
LQEDGEADELAVQLRVNSMKDFNPASLVEQVPELKKLMELRDALVALKGPLGNAPAFRKAIEGVLADDESRGRVLGELGL
NAAAPDA

Sequences:

>Translated_167_residues
MAKEGSVAPKERINVTFKPATGGAQEEIELPLKLLAIGDYTHRKDDRKIEDRKPISIDKMTFDEVLAKQELGLTLSVPNR
LQEDGEADELAVQLRVNSMKDFNPASLVEQVPELKKLMELRDALVALKGPLGNAPAFRKAIEGVLADDESRGRVLGELGL
NAAAPDA
>Mature_166_residues
AKEGSVAPKERINVTFKPATGGAQEEIELPLKLLAIGDYTHRKDDRKIEDRKPISIDKMTFDEVLAKQELGLTLSVPNRL
QEDGEADELAVQLRVNSMKDFNPASLVEQVPELKKLMELRDALVALKGPLGNAPAFRKAIEGVLADDESRGRVLGELGLN
AAAPDA

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18211; Mature: 18080

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEGSVAPKERINVTFKPATGGAQEEIELPLKLLAIGDYTHRKDDRKIEDRKPISIDKM
CCCCCCCCCHHHEEEEEECCCCCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCHH
TFDEVLAKQELGLTLSVPNRLQEDGEADELAVQLRVNSMKDFNPASLVEQVPELKKLMEL
HHHHHHHHHHCCEEEECCHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
RDALVALKGPLGNAPAFRKAIEGVLADDESRGRVLGELGLNAAAPDA
HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEHHCCCCCCCCCC
>Mature Secondary Structure 
AKEGSVAPKERINVTFKPATGGAQEEIELPLKLLAIGDYTHRKDDRKIEDRKPISIDKM
CCCCCCCCHHHEEEEEECCCCCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCHH
TFDEVLAKQELGLTLSVPNRLQEDGEADELAVQLRVNSMKDFNPASLVEQVPELKKLMEL
HHHHHHHHHHCCEEEECCHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
RDALVALKGPLGNAPAFRKAIEGVLADDESRGRVLGELGLNAAAPDA
HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA