Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77461815

Identifier: 77461815

GI number: 77461815

Start: 6264965

End: 6266440

Strand: Reverse

Name: 77461815

Synonym: Pfl01_5594

Alternate gene names: NA

Gene position: 6266440-6264965 (Counterclockwise)

Preceding gene: 77461816

Following gene: 77461814

Centisome position: 97.33

GC content: 59.35

Gene sequence:

>1476_bases
ATGAGCACTAGCGCAGCACAACAGAACGCCGCAGAAAACGGCGAGTACAGCATCCTCGACAGCATCATCGCCGAAACCCG
CCTGACGCCGGACGACGAAGCCTACGACATCGCCAAACGCGGTGTGTCGGCGTTCATCGAAGAGCTGCTCAAGCCGCAGA
ACAACGGTGAGCCGGTCAAGAAAGCCATGGTTGACCGCATGATCGCCGAGATCGATGCCAAGCTCAGCCGTCAGATGGAC
GAAATCCTGCACCACCCGGACTTCCAGGCCCTGGAATCGTCGTGGCGTGGCCTGCAACTGCTGGTCGACCGCACCAACTT
CCGCGAAAACATCAAGATCGAAATCCTCAACGTCTCCAAAGAAGACCTGCTGGACGATTTCGAAGACTCGCCGGAAGTGA
TGCAGTCGGGCCTGTACAAGCACATCTACACCGCTGAATACGGCCAGTTCGGTGGTCAGCCGGTTGGCGCGATCATTGCC
AACTACTACATGTCCCCAAGCTCGCCGGACGTGAAGCTGATGCAGTACGTGTCCAGCGTAGCCTGCATGTCCCACGCACC
GTTCATCGCCGCCGCCGGCCCGAAATTCTTCGGCCTGGAAAGCTTCACCGGCCTGCCGGACCTGAAGGATCTGAAAGATC
ACTTCGAAGGCCCGCAATTCGCCAAATGGCAGAGCTTCCGTACCTCGGAAGACTCCCGCTACGTCGGCCTGACCGTGCCG
CGTTTCCTGCTGCGTAACCCGTACGACCCGGAAGAAAACCCGGTCAAATCGTTCGTGTACAAGGAAAACGTTGCCAACAG
CCACGAGCACTACCTGTGGGGCAACACCGCTTACGCGTTCGGCACCAAGCTGACCGACAGCTTCGCCAAGTTCCGCTGGT
GCCCGAACATCATCGGCCCACAGAGCGGCGGCGCGGTTGAAGACCTGCCTCTGCACCACTTCGAAAGCATGGGCGAAATC
GAAACCAAGATTCCTACCGAAGTTCTGGTTTCCGACCGTCGTGAATACGAACTGGCCGAGGAAGGCTTCATCTCCCTGAC
CATGCGCAAAGGCTCCGACAACGCGGCGTTCTTCTCCGCCAGCTCGGTGCAGAAGCCGAAGTTCTTCGGCATCAGCGCAG
AAGGCAAGGCGGCAGAGCTGAACTACAAGCTCGGCACCCAACTGCCGTACATGATGATCGTCAACCGCCTGGCTCACTAC
CTGAAAGTGCTGCAGCGCGAGCAACTCGGTTCGTGGAAAGAGCGTACCGACCTCGAGCTGGAACTGAACAAGTGGATCCG
CCAGTACGTGGCCGACCAGGAAAACCCGAGCGCCGAAGTACGTGGCCGCCGTCCGCTGCGCGCTGCGCAAGTGATCGTCA
GCGACGTTGAAGGCGAGCCGGGCTGGTACCGCGTCAGCCTGAACGTGCGCCCGCACTTCAAGTACATGGGTGCCGATTTC
ACCCTGTCGCTGGTTGGCAAGCTGGACAAAGAGTAA

Upstream 100 bases:

>100_bases
CTCGCCGACGACGAATCCCGCGGTCGCGTACTCGGTGAGCTGGGCCTGAACGCCGCAGCTCCGGACGCTTGAGACTCCAG
CAGCCAAGGAAGCCAACACA

Downstream 100 bases:

>100_bases
GAGCGACTCATGGACGGATACGGCAGCCTCTTCGAACGCCTCAACGGCGACGCGGAACTACGCAAGGGCAGGAGCCTCGA
GGCTTCGGCCATGGCGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MSTSAAQQNAAENGEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVKKAMVDRMIAEIDAKLSRQMD
EILHHPDFQALESSWRGLQLLVDRTNFRENIKIEILNVSKEDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIA
NYYMSPSSPDVKLMQYVSSVACMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRTSEDSRYVGLTVP
RFLLRNPYDPEENPVKSFVYKENVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGPQSGGAVEDLPLHHFESMGEI
ETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSASSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHY
LKVLQREQLGSWKERTDLELELNKWIRQYVADQENPSAEVRGRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE

Sequences:

>Translated_491_residues
MSTSAAQQNAAENGEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVKKAMVDRMIAEIDAKLSRQMD
EILHHPDFQALESSWRGLQLLVDRTNFRENIKIEILNVSKEDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIA
NYYMSPSSPDVKLMQYVSSVACMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRTSEDSRYVGLTVP
RFLLRNPYDPEENPVKSFVYKENVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGPQSGGAVEDLPLHHFESMGEI
ETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSASSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHY
LKVLQREQLGSWKERTDLELELNKWIRQYVADQENPSAEVRGRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
>Mature_490_residues
STSAAQQNAAENGEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVKKAMVDRMIAEIDAKLSRQMDE
ILHHPDFQALESSWRGLQLLVDRTNFRENIKIEILNVSKEDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIAN
YYMSPSSPDVKLMQYVSSVACMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRTSEDSRYVGLTVPR
FLLRNPYDPEENPVKSFVYKENVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGPQSGGAVEDLPLHHFESMGEIE
TKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSASSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYL
KVLQREQLGSWKERTDLELELNKWIRQYVADQENPSAEVRGRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADFT
LSLVGKLDKE

Specific function: Unknown

COG id: COG3517

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55589; Mature: 55458

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSAAQQNAAENGEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVK
CCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
KAMVDRMIAEIDAKLSRQMDEILHHPDFQALESSWRGLQLLVDRTNFRENIKIEILNVSK
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCH
EDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYMSPSSPDVKLMQYVSSV
HHHHHHCCCCHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
ACMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRTSEDSRYVGLTVP
HHHHCCCEEEECCCCCCCCHHCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEEHH
RFLLRNPYDPEENPVKSFVYKENVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGP
HHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCHHECCCHHHHHHHHHHCCCCCCCC
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSA
CCCCCCCCCCHHHHHHCCCHHHCCCHHHHHCCCHHHHHHHCCEEEEEEECCCCCCEEEEC
SSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
CCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEE
ELNKWIRQYVADQENPSAEVRGRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADF
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCEEEECCCE
TLSLVGKLDKE
EEEEHHCCCCC
>Mature Secondary Structure 
STSAAQQNAAENGEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVK
CCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
KAMVDRMIAEIDAKLSRQMDEILHHPDFQALESSWRGLQLLVDRTNFRENIKIEILNVSK
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCH
EDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYMSPSSPDVKLMQYVSSV
HHHHHHCCCCHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
ACMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRTSEDSRYVGLTVP
HHHHCCCEEEECCCCCCCCHHCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEEHH
RFLLRNPYDPEENPVKSFVYKENVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGP
HHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCHHECCCHHHHHHHHHHCCCCCCCC
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSA
CCCCCCCCCCHHHHHHCCCHHHCCCHHHHHCCCHHHHHHHCCEEEEEEECCCCCCEEEEC
SSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
CCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEE
ELNKWIRQYVADQENPSAEVRGRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADF
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCEEEECCCE
TLSLVGKLDKE
EEEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA