Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77461814
Identifier: 77461814
GI number: 77461814
Start: 6264548
End: 6264955
Strand: Reverse
Name: 77461814
Synonym: Pfl01_5593
Alternate gene names: NA
Gene position: 6264955-6264548 (Counterclockwise)
Preceding gene: 77461815
Following gene: 77461813
Centisome position: 97.31
GC content: 62.5
Gene sequence:
>408_bases ATGGACGGATACGGCAGCCTCTTCGAACGCCTCAACGGCGACGCGGAACTACGCAAGGGCAGGAGCCTCGAGGCTTCGGC CATGGCGTCGGTGGCTGCCCATCTGGCCAAAATGCTCAGCACCCGGGCCGGCAGCGTGCAAACGCTGTCCGACTACGGGT TGCCCGATCTCAATGACATGCGCCTGAGCCTGCACGACTCCCTGAGTCAGGCCCGCCTGGCCATCGAAAGCTTCATCGAA GCCTACGAACCGCGCCTGAGCAACGTGCGTGTCATTTCCCTGCCGCGTGACCACGACCAGCTTCGCCTGGCCTTCAGCAT CGAAGGCCTGCTGGAAGTCGAGGGTTTCAAGCGTCAGGTCAGTTTCGCTGCGCGCCTGGATGGCAGCGGTCAAGTGAAGG TCAACTAA
Upstream 100 bases:
>100_bases GTACCGCGTCAGCCTGAACGTGCGCCCGCACTTCAAGTACATGGGTGCCGATTTCACCCTGTCGCTGGTTGGCAAGCTGG ACAAAGAGTAAGAGCGACTC
Downstream 100 bases:
>100_bases GGAGAACCCCGATGTCTGGCAAACCAGCAGCACGCGTATCCGACCCCACCGCTTGCCCGCTCCCCGGCCACGGCACCAAC CCGATCGCCGCCGGTTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MDGYGSLFERLNGDAELRKGRSLEASAMASVAAHLAKMLSTRAGSVQTLSDYGLPDLNDMRLSLHDSLSQARLAIESFIE AYEPRLSNVRVISLPRDHDQLRLAFSIEGLLEVEGFKRQVSFAARLDGSGQVKVN
Sequences:
>Translated_135_residues MDGYGSLFERLNGDAELRKGRSLEASAMASVAAHLAKMLSTRAGSVQTLSDYGLPDLNDMRLSLHDSLSQARLAIESFIE AYEPRLSNVRVISLPRDHDQLRLAFSIEGLLEVEGFKRQVSFAARLDGSGQVKVN >Mature_135_residues MDGYGSLFERLNGDAELRKGRSLEASAMASVAAHLAKMLSTRAGSVQTLSDYGLPDLNDMRLSLHDSLSQARLAIESFIE AYEPRLSNVRVISLPRDHDQLRLAFSIEGLLEVEGFKRQVSFAARLDGSGQVKVN
Specific function: Unknown
COG id: COG3518
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14823; Mature: 14823
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGYGSLFERLNGDAELRKGRSLEASAMASVAAHLAKMLSTRAGSVQTLSDYGLPDLNDM CCCHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCHH RLSLHDSLSQARLAIESFIEAYEPRLSNVRVISLPRDHDQLRLAFSIEGLLEVEGFKRQV HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHH SFAARLDGSGQVKVN HHHHCCCCCCEEEEC >Mature Secondary Structure MDGYGSLFERLNGDAELRKGRSLEASAMASVAAHLAKMLSTRAGSVQTLSDYGLPDLNDM CCCHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCHH RLSLHDSLSQARLAIESFIEAYEPRLSNVRVISLPRDHDQLRLAFSIEGLLEVEGFKRQV HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHH SFAARLDGSGQVKVN HHHHCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA