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The map label for this gene is 77461807

Identifier: 77461807

GI number: 77461807

Start: 6259242

End: 6261029

Strand: Reverse

Name: 77461807

Synonym: Pfl01_5586

Alternate gene names: NA

Gene position: 6261029-6259242 (Counterclockwise)

Preceding gene: 77461808

Following gene: 77461806

Centisome position: 97.25

GC content: 60.74

Gene sequence:

>1788_bases
GTGTCCTTTAACCACTACTACCAAAGCGAACTCACCGCACTGCGCCAGCTGGGCCGCCGTTTCGCCGAGCGTAGTCCGGC
GTTGGCGCCGTTCCTGGGGCAGGCCGGGCGGGATCCGGATGTGGAGCGGTTGCTGGAAGGCTTTGCGTTTCTGACCGGGC
GGCTGCGCCAGAAGCTCGATGACGAGTTGCCGGAGCTCAGCCATTCCCTGATGCAGTTGTTGTGGCCGAACTACATGCGC
CCGCTGCCTGCGTTCAGCATTCTGCAGTTCGATCCGCTCAAGCGTTCCGGGCCGGCGCTGAAGGTCGAGCGTGACACGCC
GATCGAGAGCGTGCCGATCGAAGACGTGCGTTGCCGCTTTCGCACCTGCTACCCGACCGAAGTCATGGCGCTGGATCTGG
CCGCGCTGAACTACTCGGTGAAGGGCGACGGTTCGCTGCTCAGCCTGCGCCTGGAGATGAGTGCCGACGGCCACCTCGGC
GAGCTTGAGCTGAGCAAGCTGCGCCTGCACTTTGCCGGCGAGCGCTACATCAGCCAGATGCTCTACCTGAGCCTGCTGCG
CAACCTCGACGGCATCGAACTTATCCCGCTCGACGGCGCCGGCAAGCCGATCGATGGCGTGAGCGGCAAGCCGATGGCGT
TCAAGATTCCGGGCGACCGGGTCAAACCGGTGGGCTTTGCCGAAGAAGAAGCGTTGATCCCGTATCCGCTGAACACTTTC
CGCGGCTATCGCTATCTGCAGGAATACTTCGCCTTCCAGGACAAGTTCCTGTTCGTCGATGTCCACGGCCTCGACATCCT
CAAGGCGCTGCCGGAAGACACCCTCAAGCAGATGCGCGGCCTGGAATTGCGCTTCGACATCCGCAAGAGCGGCATCATGC
GCATGCGTCCGACCCTTGATAACGTGAAGCTGTTCTGCACGCCGATCGTCAACCTGTTCAAGCACGACGCACTGCCGATC
CGCCTCGACGGCAAACAGGATGAATACCTGCTGCTGCCGGCCGAATACGATCTGGAAAACTGCGGCGTGTTCTCGGTTGA
AACCGTGACCGGCTGGAAACCCGGCGGCCTCGGTTATCAGGAGTACGTGCCGTTCGAATCCTTCGAGCACGACCCAAGTT
TCGACGTGCCCAACAGCCGTCCGCATTACAGCATCCGTCAGCGTTCGTCGCTGCTGCACGACGGCCTCGACACCTACCTG
AGCTTCGGCATCCGCCACACCGAAGCCCATGAAACCCTGTCGATCGAGCTGGTCTGCACCAACCAGAACCTGCCGCGCAA
ACTCAAGCTCGGGCAGATCTGCATGGCCTGCGAAGAGACCCCGGAGTTCCTGAGTTTCCGCAACATCACCCCGGCCACTT
CGAGTTTTGCGCCGCCGCTGAACCGTGACTTCCTGTGGAAGCTGATCAGCAACATGTCGCTTAACTATCTGTCGCTGGCC
GACGTCAATGCATTGAAGGTGATTCTCGAAACCTACGACCTGCCGCGCTACTACGACCAGCACGCGGAGAAGGTCAGCAA
ACGCCTGCTCGGCGGTCTCAAGCACATCAAGCATCACCACGTGGACCGCTTGCACCGTGGTTTGCCGGTGCGCGGTCTGC
GCACCGAACTGACCATCGACCCGGAAGGGTATATCGGCGAAGGCGACCTGTTCGTCTTCGCCTCGGTTCTCAACGAGTTT
TTCGCGCTTTACGCCAGTCTCAATTCATTCCATGAGCTGCGGGTAAAAAGCACACAGGGAGAGGTGTACCAATGGACACC
ACGTATGGGCCTGCAGCCCCTGCTTTAA

Upstream 100 bases:

>100_bases
TGTGCCGTACCTCCTGATCGCCGGTTACTTCTGCGCCGGCGTGACGGTTGCGCTCTACAGGATATTTTTTTGATGAGTTC
CACTACCAGGCAGGTAACCC

Downstream 100 bases:

>100_bases
GCGGGCTGACGAAGGTAATACGCGAGTACTCGCTGTTTCAGGCCGTGCTGCTGGTGATCGACCGGCTGCGCGATGCGCAC
CCGTACCTGAGCGAAGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; LOW QUALITY PROTEIN Type VI Secretion Protein; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA

Number of amino acids: Translated: 595; Mature: 594

Protein sequence:

>595_residues
MSFNHYYQSELTALRQLGRRFAERSPALAPFLGQAGRDPDVERLLEGFAFLTGRLRQKLDDELPELSHSLMQLLWPNYMR
PLPAFSILQFDPLKRSGPALKVERDTPIESVPIEDVRCRFRTCYPTEVMALDLAALNYSVKGDGSLLSLRLEMSADGHLG
ELELSKLRLHFAGERYISQMLYLSLLRNLDGIELIPLDGAGKPIDGVSGKPMAFKIPGDRVKPVGFAEEEALIPYPLNTF
RGYRYLQEYFAFQDKFLFVDVHGLDILKALPEDTLKQMRGLELRFDIRKSGIMRMRPTLDNVKLFCTPIVNLFKHDALPI
RLDGKQDEYLLLPAEYDLENCGVFSVETVTGWKPGGLGYQEYVPFESFEHDPSFDVPNSRPHYSIRQRSSLLHDGLDTYL
SFGIRHTEAHETLSIELVCTNQNLPRKLKLGQICMACEETPEFLSFRNITPATSSFAPPLNRDFLWKLISNMSLNYLSLA
DVNALKVILETYDLPRYYDQHAEKVSKRLLGGLKHIKHHHVDRLHRGLPVRGLRTELTIDPEGYIGEGDLFVFASVLNEF
FALYASLNSFHELRVKSTQGEVYQWTPRMGLQPLL

Sequences:

>Translated_595_residues
MSFNHYYQSELTALRQLGRRFAERSPALAPFLGQAGRDPDVERLLEGFAFLTGRLRQKLDDELPELSHSLMQLLWPNYMR
PLPAFSILQFDPLKRSGPALKVERDTPIESVPIEDVRCRFRTCYPTEVMALDLAALNYSVKGDGSLLSLRLEMSADGHLG
ELELSKLRLHFAGERYISQMLYLSLLRNLDGIELIPLDGAGKPIDGVSGKPMAFKIPGDRVKPVGFAEEEALIPYPLNTF
RGYRYLQEYFAFQDKFLFVDVHGLDILKALPEDTLKQMRGLELRFDIRKSGIMRMRPTLDNVKLFCTPIVNLFKHDALPI
RLDGKQDEYLLLPAEYDLENCGVFSVETVTGWKPGGLGYQEYVPFESFEHDPSFDVPNSRPHYSIRQRSSLLHDGLDTYL
SFGIRHTEAHETLSIELVCTNQNLPRKLKLGQICMACEETPEFLSFRNITPATSSFAPPLNRDFLWKLISNMSLNYLSLA
DVNALKVILETYDLPRYYDQHAEKVSKRLLGGLKHIKHHHVDRLHRGLPVRGLRTELTIDPEGYIGEGDLFVFASVLNEF
FALYASLNSFHELRVKSTQGEVYQWTPRMGLQPLL
>Mature_594_residues
SFNHYYQSELTALRQLGRRFAERSPALAPFLGQAGRDPDVERLLEGFAFLTGRLRQKLDDELPELSHSLMQLLWPNYMRP
LPAFSILQFDPLKRSGPALKVERDTPIESVPIEDVRCRFRTCYPTEVMALDLAALNYSVKGDGSLLSLRLEMSADGHLGE
LELSKLRLHFAGERYISQMLYLSLLRNLDGIELIPLDGAGKPIDGVSGKPMAFKIPGDRVKPVGFAEEEALIPYPLNTFR
GYRYLQEYFAFQDKFLFVDVHGLDILKALPEDTLKQMRGLELRFDIRKSGIMRMRPTLDNVKLFCTPIVNLFKHDALPIR
LDGKQDEYLLLPAEYDLENCGVFSVETVTGWKPGGLGYQEYVPFESFEHDPSFDVPNSRPHYSIRQRSSLLHDGLDTYLS
FGIRHTEAHETLSIELVCTNQNLPRKLKLGQICMACEETPEFLSFRNITPATSSFAPPLNRDFLWKLISNMSLNYLSLAD
VNALKVILETYDLPRYYDQHAEKVSKRLLGGLKHIKHHHVDRLHRGLPVRGLRTELTIDPEGYIGEGDLFVFASVLNEFF
ALYASLNSFHELRVKSTQGEVYQWTPRMGLQPLL

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67987; Mature: 67856

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFNHYYQSELTALRQLGRRFAERSPALAPFLGQAGRDPDVERLLEGFAFLTGRLRQKLD
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
DELPELSHSLMQLLWPNYMRPLPAFSILQFDPLKRSGPALKVERDTPIESVPIEDVRCRF
HHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHE
RTCYPTEVMALDLAALNYSVKGDGSLLSLRLEMSADGHLGELELSKLRLHFAGERYISQM
EECCCHHHHHHHHHHHEEEECCCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHH
LYLSLLRNLDGIELIPLDGAGKPIDGVSGKPMAFKIPGDRVKPVGFAEEEALIPYPLNTF
HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHH
RGYRYLQEYFAFQDKFLFVDVHGLDILKALPEDTLKQMRGLELRFDIRKSGIMRMRPTLD
HHHHHHHHHHHHCCCEEEEEECCHHHHHHCCHHHHHHHHCCEEEEEHHHCCCEEECCCCC
NVKLFCTPIVNLFKHDALPIRLDGKQDEYLLLPAEYDLENCGVFSVETVTGWKPGGLGYQ
CHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCHH
EYVPFESFEHDPSFDVPNSRPHYSIRQRSSLLHDGLDTYLSFGIRHTEAHETLSIELVCT
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC
NQNLPRKLKLGQICMACEETPEFLSFRNITPATSSFAPPLNRDFLWKLISNMSLNYLSLA
CCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEC
DVNALKVILETYDLPRYYDQHAEKVSKRLLGGLKHIKHHHVDRLHRGLPVRGLRTELTID
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
PEGYIGEGDLFVFASVLNEFFALYASLNSFHELRVKSTQGEVYQWTPRMGLQPLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCC
>Mature Secondary Structure 
SFNHYYQSELTALRQLGRRFAERSPALAPFLGQAGRDPDVERLLEGFAFLTGRLRQKLD
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
DELPELSHSLMQLLWPNYMRPLPAFSILQFDPLKRSGPALKVERDTPIESVPIEDVRCRF
HHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCCCEEEEECCCCCCCCCCHHHHHHE
RTCYPTEVMALDLAALNYSVKGDGSLLSLRLEMSADGHLGELELSKLRLHFAGERYISQM
EECCCHHHHHHHHHHHEEEECCCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHH
LYLSLLRNLDGIELIPLDGAGKPIDGVSGKPMAFKIPGDRVKPVGFAEEEALIPYPLNTF
HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHH
RGYRYLQEYFAFQDKFLFVDVHGLDILKALPEDTLKQMRGLELRFDIRKSGIMRMRPTLD
HHHHHHHHHHHHCCCEEEEEECCHHHHHHCCHHHHHHHHCCEEEEEHHHCCCEEECCCCC
NVKLFCTPIVNLFKHDALPIRLDGKQDEYLLLPAEYDLENCGVFSVETVTGWKPGGLGYQ
CHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCHH
EYVPFESFEHDPSFDVPNSRPHYSIRQRSSLLHDGLDTYLSFGIRHTEAHETLSIELVCT
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC
NQNLPRKLKLGQICMACEETPEFLSFRNITPATSSFAPPLNRDFLWKLISNMSLNYLSLA
CCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEC
DVNALKVILETYDLPRYYDQHAEKVSKRLLGGLKHIKHHHVDRLHRGLPVRGLRTELTID
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC
PEGYIGEGDLFVFASVLNEFFALYASLNSFHELRVKSTQGEVYQWTPRMGLQPLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA