Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77461808
Identifier: 77461808
GI number: 77461808
Start: 6261057
End: 6261488
Strand: Reverse
Name: 77461808
Synonym: Pfl01_5587
Alternate gene names: NA
Gene position: 6261488-6261057 (Counterclockwise)
Preceding gene: 77461809
Following gene: 77461807
Centisome position: 97.25
GC content: 56.02
Gene sequence:
>432_bases ATGCCCATCCTCAGCCGCGCGCAGCTGAGTTTTTTCATGGGTGCCTTGTGGACGCCATTCTTGGCCATGCTGGCGTTTTC ATCCTATGGCCTGTGGATTGGCGATTATTCGACATTCGATTCGTCCGAGACCCACTGGGTGTATCTGTTGTGGTTTGGCA TGCCCGGACTGTTGTTATTTGCGCTGTGGGTATCGCGAACCGCGAAGAGCCGCAATGAGCAGCAGGCGCTGCGAATGGTC TGGCTGGCGCCGTTGAAGATCATCCCTTTCTACGCGGTGCCCTGGATGCTTTATGGCTTGTGCAGCCTGGTCATCGGGCC GTTCGACAATGCTTTCATGGCCTATGGCTGGATCCTGCTTGTGCCGTACCTCCTGATCGCCGGTTACTTCTGCGCCGGCG TGACGGTTGCGCTCTACAGGATATTTTTTTGA
Upstream 100 bases:
>100_bases TGGAAAAGCGCGCGTTGATGCGGCAGGCAATGCCTGCGATTGCTTCGCAGAACGTGCTTTCGAAGATGAGGACCTGCCCG TGATCGGTGTATCGAATCAG
Downstream 100 bases:
>100_bases TGAGTTCCACTACCAGGCAGGTAACCCGTGTCCTTTAACCACTACTACCAAAGCGAACTCACCGCACTGCGCCAGCTGGG CCGCCGTTTCGCCGAGCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MPILSRAQLSFFMGALWTPFLAMLAFSSYGLWIGDYSTFDSSETHWVYLLWFGMPGLLLFALWVSRTAKSRNEQQALRMV WLAPLKIIPFYAVPWMLYGLCSLVIGPFDNAFMAYGWILLVPYLLIAGYFCAGVTVALYRIFF
Sequences:
>Translated_143_residues MPILSRAQLSFFMGALWTPFLAMLAFSSYGLWIGDYSTFDSSETHWVYLLWFGMPGLLLFALWVSRTAKSRNEQQALRMV WLAPLKIIPFYAVPWMLYGLCSLVIGPFDNAFMAYGWILLVPYLLIAGYFCAGVTVALYRIFF >Mature_142_residues PILSRAQLSFFMGALWTPFLAMLAFSSYGLWIGDYSTFDSSETHWVYLLWFGMPGLLLFALWVSRTAKSRNEQQALRMVW LAPLKIIPFYAVPWMLYGLCSLVIGPFDNAFMAYGWILLVPYLLIAGYFCAGVTVALYRIFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16425; Mature: 16294
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPILSRAQLSFFMGALWTPFLAMLAFSSYGLWIGDYSTFDSSETHWVYLLWFGMPGLLLF CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEHHHHCCHHHHHH ALWVSRTAKSRNEQQALRMVWLAPLKIIPFYAVPWMLYGLCSLVIGPFDNAFMAYGWILL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VPYLLIAGYFCAGVTVALYRIFF HHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure PILSRAQLSFFMGALWTPFLAMLAFSSYGLWIGDYSTFDSSETHWVYLLWFGMPGLLLF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEHHHHCCHHHHHH ALWVSRTAKSRNEQQALRMVWLAPLKIIPFYAVPWMLYGLCSLVIGPFDNAFMAYGWILL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VPYLLIAGYFCAGVTVALYRIFF HHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA