| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461793
Identifier: 77461793
GI number: 77461793
Start: 6240486
End: 6241364
Strand: Reverse
Name: 77461793
Synonym: Pfl01_5572
Alternate gene names: NA
Gene position: 6241364-6240486 (Counterclockwise)
Preceding gene: 77461794
Following gene: 77461792
Centisome position: 96.94
GC content: 43.8
Gene sequence:
>879_bases ATGAAATTTTACGGGTTGTTGATTTTTTTATTGCTCGCTGCATGCGGTGACTCAGACAAAGTAGGGACTGTTTCCATGGC AAACAAAACCCAGTTAATCAGTGTTGAAATTGGTGAGGAGATAAGCAATCTACTTTCTAGTTCTCCTGTGTCTTTTTCAA AAGAGTGCATTTCTGATGTGGATATGTGCTGGTATAAAGTTAAAAAGTCATTCGGTGATGAAGACCTTCCATCAGTCGAG GTGAATAAATCTCTGCGTCTAGACCAGGTTGCGAGTGTCAGTACTGCAGTAGATGGTGAGGTAGGCACTACTGTGGAGAA CCTCGACTTATCAGTTCGGAGTCTCCCGGATGGAAGCAAGCATGATGAGTATCGAGCGTTTCTATACGATCTCATAAAAG ATATAAAGAAGGCGGGCTGGGTACACTATTACGCACCTTCTGATCCTAGAATTTCCGGTAGTCAAATTGGCAAGATTAAT TCAGCTGATGAAGTCATGGGTGATAGCGTATTAAGTCATCCGTGGCTGGATCCGAACTATAATCTGGATCATGAGCGATG GTTGAAAGTCGGTAAATTCTACAATTGGCATTTTTATAAGGATGGCAATCATCTTACGTTGCAAGCATGGCGGCGAGACT CTGATGCTGCTCCTGATGAGCGCGGAACGTATTTGGTAAGTTTGAGCTTCACCACCGAGCGTGAATACTGGAGTGCTGCT TTCACCGAGGCTGAAGATAAAAAGCGTTGGAAAGAGCTGCTGCCAGCCAAGATGAAAGAATATGCTGCTATTCGGAAGTC CCGAGAAGACAAGGCGGAAAAGGCGGGTATTAAAATTGACTCAAGCTATCAAGATCCAACCATCAAAGCATTGAAGTAA
Upstream 100 bases:
>100_bases TTATTCTGGAAATTGCAAAGCAATACCATAAAATGATGGGGCAAAAGAAAGATTATATGGAGCAGCAAATAGAGACGATT TCTACCTGGAAAAGCCGAAA
Downstream 100 bases:
>100_bases GTTGGAAGGAGACGGGTTGTATTCTTCCTGTCTCCTTTAAACTCCCCGCCCTCAAGGAACGCGCTCAGGACACGGAATGC CAGCCCCCTCTTTCTCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MKFYGLLIFLLLAACGDSDKVGTVSMANKTQLISVEIGEEISNLLSSSPVSFSKECISDVDMCWYKVKKSFGDEDLPSVE VNKSLRLDQVASVSTAVDGEVGTTVENLDLSVRSLPDGSKHDEYRAFLYDLIKDIKKAGWVHYYAPSDPRISGSQIGKIN SADEVMGDSVLSHPWLDPNYNLDHERWLKVGKFYNWHFYKDGNHLTLQAWRRDSDAAPDERGTYLVSLSFTTEREYWSAA FTEAEDKKRWKELLPAKMKEYAAIRKSREDKAEKAGIKIDSSYQDPTIKALK
Sequences:
>Translated_292_residues MKFYGLLIFLLLAACGDSDKVGTVSMANKTQLISVEIGEEISNLLSSSPVSFSKECISDVDMCWYKVKKSFGDEDLPSVE VNKSLRLDQVASVSTAVDGEVGTTVENLDLSVRSLPDGSKHDEYRAFLYDLIKDIKKAGWVHYYAPSDPRISGSQIGKIN SADEVMGDSVLSHPWLDPNYNLDHERWLKVGKFYNWHFYKDGNHLTLQAWRRDSDAAPDERGTYLVSLSFTTEREYWSAA FTEAEDKKRWKELLPAKMKEYAAIRKSREDKAEKAGIKIDSSYQDPTIKALK >Mature_292_residues MKFYGLLIFLLLAACGDSDKVGTVSMANKTQLISVEIGEEISNLLSSSPVSFSKECISDVDMCWYKVKKSFGDEDLPSVE VNKSLRLDQVASVSTAVDGEVGTTVENLDLSVRSLPDGSKHDEYRAFLYDLIKDIKKAGWVHYYAPSDPRISGSQIGKIN SADEVMGDSVLSHPWLDPNYNLDHERWLKVGKFYNWHFYKDGNHLTLQAWRRDSDAAPDERGTYLVSLSFTTEREYWSAA FTEAEDKKRWKELLPAKMKEYAAIRKSREDKAEKAGIKIDSSYQDPTIKALK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33030; Mature: 33030
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFYGLLIFLLLAACGDSDKVGTVSMANKTQLISVEIGEEISNLLSSSPVSFSKECISDV CHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEEHHHHHHHHHHCCCCCHHHHHHHHH DMCWYKVKKSFGDEDLPSVEVNKSLRLDQVASVSTAVDGEVGTTVENLDLSVRSLPDGSK HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCEEEECCCCCCC HDEYRAFLYDLIKDIKKAGWVHYYAPSDPRISGSQIGKINSADEVMGDSVLSHPWLDPNY CHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCC NLDHERWLKVGKFYNWHFYKDGNHLTLQAWRRDSDAAPDERGTYLVSLSFTTEREYWSAA CCCHHHHHHHCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEEEECCHHHHHHH FTEAEDKKRWKELLPAKMKEYAAIRKSREDKAEKAGIKIDSSYQDPTIKALK HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC >Mature Secondary Structure MKFYGLLIFLLLAACGDSDKVGTVSMANKTQLISVEIGEEISNLLSSSPVSFSKECISDV CHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEEHHHHHHHHHHCCCCCHHHHHHHHH DMCWYKVKKSFGDEDLPSVEVNKSLRLDQVASVSTAVDGEVGTTVENLDLSVRSLPDGSK HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCEEEECCCCCCC HDEYRAFLYDLIKDIKKAGWVHYYAPSDPRISGSQIGKINSADEVMGDSVLSHPWLDPNY CHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCC NLDHERWLKVGKFYNWHFYKDGNHLTLQAWRRDSDAAPDERGTYLVSLSFTTEREYWSAA CCCHHHHHHHCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEEEECCHHHHHHH FTEAEDKKRWKELLPAKMKEYAAIRKSREDKAEKAGIKIDSSYQDPTIKALK HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA