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The map label for this gene is yfcH [H]

Identifier: 77461792

GI number: 77461792

Start: 6239015

End: 6240409

Strand: Reverse

Name: yfcH [H]

Synonym: Pfl01_5571

Alternate gene names: 77461792

Gene position: 6240409-6239015 (Counterclockwise)

Preceding gene: 77461793

Following gene: 77461791

Centisome position: 96.92

GC content: 62.51

Gene sequence:

>1395_bases
ATGCCAGCCCCCTCTTTCTCTCTTCGCCCCGTGATGGTGCTTTGGCTGTACGCCGCGGCAATCGTGCATGTGCTCGCCGG
TCTCACGCTGACCTGGGCCGGTCATTCCGGATTACTCGACGGCTATTTGCACACCCTCGAACTCGCGTTCTGGGGCGCCG
ATGCGGTCCCTGCCGCCGGTCACGAGCTGCAGGTCTGGTGGCTCGCACTGTTCGGCGCGACGCTGCAAAGTTATTCGCTG
TACATGCTTGCGTTGGTGCACCTCGGCAACCGTCTTAAAACTCCCGCAATTTGGGGATGGTTGATGGCGGGCGTGCTGTT
ATGGGCGCCGCAGGACATGTGGCTTTCAGCTCAACAACAGGTCTGGTCGCATCTGTGGCTCGACGGTTTTGCGCTGCTGG
TGCTGTTGCCGCCGCTGGTCTGGTTGCTGCTCCATGATCGTCGGAAGTCTCCGCCAGAAAGGGCCGTGAGCAAATCCAAC
CCGTTTGCCGGCGGCGCCTACAAGCGTGTGCTGATCACCGGGGGTACCGGGTTTATCGGTGAAGCCGTGGTCAATCAGTT
ACTCGACGCCGGCCACACGGTCAGCGTGTTAGCGCGTGATCCGTTGAAAGCGGCGAACCTGTTCGACGGTCGCGTCCGCT
GTGTGCGGTCGTTGAGCGAACTCGACCGCGACGAACCATTCGACGTAGTGATCAACCTCGCCGGCGCACCGGTCGCCGGT
CCACGCTGGAGCCCCGAGCGGCAGGCGCAATTGCTCGCCAGTCGGGTCAACACCACTGAAGCGTTGATGACCTGGCTGAA
AAACGCCAGGCACAAACCCGCGCTGTGGATTCAGGCCTCGGCCATCGGTTTCTACGGCGTGCGCGATGCCAGCGAAAGCC
TCGATGAACAGGCGAGCAAGGGTGACGGTTTCATGGCCGAGCTCTGTGCGCGTTGGGAGGCTTCGGCGCAACCCGCCACG
CAGTTTGGCGTGCGCCAGGTGGTGCTGCGCCTCGGCGTGGTGTTCGGGCCGGGCGGTGCGCTGCTGCCGTTGCTGATTCC
GTTTCGCCTAGGTTTCGGCGGGCGGATGGGCGATGGTCAGCAGATCATGAGTTGGGTGCATCGCGACGATGTGATTCAGG
TGATCGCTCGATCCTTCCACGATGAAAATTTGCGCGGCACCTACAACATGGTCGCGCCTGAAACCGTCAGTCAGGCAGCG
TTCGCCGAGAATGTTGGCAAGGTCCTCAAACGTCCGGTGTGGTTCCACATTCCGGCCGCGCCAGTGCGTGCGTTAGCCGG
GGAAATGGCTCAGTTGTTCTTCGACGGTCAGCGTGTGGTGCCGCAGCGTTTGAGCGAGGCGGGCTACACGTTCCGCTATC
CGACCCTCGACGCCGCGCTGCGCGATCTGGTCTGA

Upstream 100 bases:

>100_bases
CCAACCATCAAAGCATTGAAGTAAGTTGGAAGGAGACGGGTTGTATTCTTCCTGTCTCCTTTAAACTCCCCGCCCTCAAG
GAACGCGCTCAGGACACGGA

Downstream 100 bases:

>100_bases
GGATCGTCCATGAGCAAGCCTTTGATGTACCTGCTGGCCGGCAACGGCAGCGCCGCCGATTGGTGGGATGACGCGCTGCC
GCATTTTCAGCGTTACGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MPAPSFSLRPVMVLWLYAAAIVHVLAGLTLTWAGHSGLLDGYLHTLELAFWGADAVPAAGHELQVWWLALFGATLQSYSL
YMLALVHLGNRLKTPAIWGWLMAGVLLWAPQDMWLSAQQQVWSHLWLDGFALLVLLPPLVWLLLHDRRKSPPERAVSKSN
PFAGGAYKRVLITGGTGFIGEAVVNQLLDAGHTVSVLARDPLKAANLFDGRVRCVRSLSELDRDEPFDVVINLAGAPVAG
PRWSPERQAQLLASRVNTTEALMTWLKNARHKPALWIQASAIGFYGVRDASESLDEQASKGDGFMAELCARWEASAQPAT
QFGVRQVVLRLGVVFGPGGALLPLLIPFRLGFGGRMGDGQQIMSWVHRDDVIQVIARSFHDENLRGTYNMVAPETVSQAA
FAENVGKVLKRPVWFHIPAAPVRALAGEMAQLFFDGQRVVPQRLSEAGYTFRYPTLDAALRDLV

Sequences:

>Translated_464_residues
MPAPSFSLRPVMVLWLYAAAIVHVLAGLTLTWAGHSGLLDGYLHTLELAFWGADAVPAAGHELQVWWLALFGATLQSYSL
YMLALVHLGNRLKTPAIWGWLMAGVLLWAPQDMWLSAQQQVWSHLWLDGFALLVLLPPLVWLLLHDRRKSPPERAVSKSN
PFAGGAYKRVLITGGTGFIGEAVVNQLLDAGHTVSVLARDPLKAANLFDGRVRCVRSLSELDRDEPFDVVINLAGAPVAG
PRWSPERQAQLLASRVNTTEALMTWLKNARHKPALWIQASAIGFYGVRDASESLDEQASKGDGFMAELCARWEASAQPAT
QFGVRQVVLRLGVVFGPGGALLPLLIPFRLGFGGRMGDGQQIMSWVHRDDVIQVIARSFHDENLRGTYNMVAPETVSQAA
FAENVGKVLKRPVWFHIPAAPVRALAGEMAQLFFDGQRVVPQRLSEAGYTFRYPTLDAALRDLV
>Mature_463_residues
PAPSFSLRPVMVLWLYAAAIVHVLAGLTLTWAGHSGLLDGYLHTLELAFWGADAVPAAGHELQVWWLALFGATLQSYSLY
MLALVHLGNRLKTPAIWGWLMAGVLLWAPQDMWLSAQQQVWSHLWLDGFALLVLLPPLVWLLLHDRRKSPPERAVSKSNP
FAGGAYKRVLITGGTGFIGEAVVNQLLDAGHTVSVLARDPLKAANLFDGRVRCVRSLSELDRDEPFDVVINLAGAPVAGP
RWSPERQAQLLASRVNTTEALMTWLKNARHKPALWIQASAIGFYGVRDASESLDEQASKGDGFMAELCARWEASAQPATQ
FGVRQVVLRLGVVFGPGGALLPLLIPFRLGFGGRMGDGQQIMSWVHRDDVIQVIARSFHDENLRGTYNMVAPETVSQAAF
AENVGKVLKRPVWFHIPAAPVRALAGEMAQLFFDGQRVVPQRLSEAGYTFRYPTLDAALRDLV

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=308, Percent_Identity=35.7142857142857, Blast_Score=173, Evalue=4e-43,
Organism=Escherichia coli, GI1788642, Length=297, Percent_Identity=40.4040404040404, Blast_Score=216, Evalue=3e-57,
Organism=Drosophila melanogaster, GI28573846, Length=304, Percent_Identity=30.9210526315789, Blast_Score=155, Evalue=6e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 51001; Mature: 50869

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAPSFSLRPVMVLWLYAAAIVHVLAGLTLTWAGHSGLLDGYLHTLELAFWGADAVPAAG
CCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
HELQVWWLALFGATLQSYSLYMLALVHLGNRLKTPAIWGWLMAGVLLWAPQDMWLSAQQQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
VWSHLWLDGFALLVLLPPLVWLLLHDRRKSPPERAVSKSNPFAGGAYKRVLITGGTGFIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEEEECCCCHHH
EAVVNQLLDAGHTVSVLARDPLKAANLFDGRVRCVRSLSELDRDEPFDVVINLAGAPVAG
HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC
PRWSPERQAQLLASRVNTTEALMTWLKNARHKPALWIQASAIGFYGVRDASESLDEQASK
CCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHC
GDGFMAELCARWEASAQPATQFGVRQVVLRLGVVFGPGGALLPLLIPFRLGFGGRMGDGQ
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHH
QIMSWVHRDDVIQVIARSFHDENLRGTYNMVAPETVSQAAFAENVGKVLKRPVWFHIPAA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCH
PVRALAGEMAQLFFDGQRVVPQRLSEAGYTFRYPTLDAALRDLV
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCHHHHHHHCC
>Mature Secondary Structure 
PAPSFSLRPVMVLWLYAAAIVHVLAGLTLTWAGHSGLLDGYLHTLELAFWGADAVPAAG
CCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
HELQVWWLALFGATLQSYSLYMLALVHLGNRLKTPAIWGWLMAGVLLWAPQDMWLSAQQQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
VWSHLWLDGFALLVLLPPLVWLLLHDRRKSPPERAVSKSNPFAGGAYKRVLITGGTGFIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEEEECCCCHHH
EAVVNQLLDAGHTVSVLARDPLKAANLFDGRVRCVRSLSELDRDEPFDVVINLAGAPVAG
HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC
PRWSPERQAQLLASRVNTTEALMTWLKNARHKPALWIQASAIGFYGVRDASESLDEQASK
CCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHC
GDGFMAELCARWEASAQPATQFGVRQVVLRLGVVFGPGGALLPLLIPFRLGFGGRMGDGQ
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHH
QIMSWVHRDDVIQVIARSFHDENLRGTYNMVAPETVSQAAFAENVGKVLKRPVWFHIPAA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCH
PVRALAGEMAQLFFDGQRVVPQRLSEAGYTFRYPTLDAALRDLV
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEECCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]