| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77461775
Identifier: 77461775
GI number: 77461775
Start: 6221829
End: 6222686
Strand: Reverse
Name: 77461775
Synonym: Pfl01_5554
Alternate gene names: NA
Gene position: 6222686-6221829 (Counterclockwise)
Preceding gene: 77461782
Following gene: 77461768
Centisome position: 96.65
GC content: 62.24
Gene sequence:
>858_bases ATGTCCGCGCCTTCTGTTTTGATCGCCGGTTGCGGTGATGTCGGCAGCCGTCTGGCCACGCAATTGCTGGCTGCCGGCTT CCAGGTCTATGGCCTGCGCCGTGATATTTCACGCTTGCCGGACGGCGTTATCGGTGTCGCCGGTGACTTGTTCAATGAGG ATTGCCCGGCAACCTGGCCGGTGGGCGCTATTGATTACCTGGTGTATAGCGCGGCAGCCACCGATCACGATGAGGCCGGT TATCGCGCGGCGTATGTGCAGGGTTTGCAGCATGTGCTGGGTTGGCTGAACGATTACGGGCAGGAGCCTGAGCGGCTGCT GTTCGTTTCCAGCAGCAGTGTTTATGGGCAGCAGAGCGGCGAGTGGGTCGATGAAAAATCCGAAACCGTCGCTGCGGGTT ATTCCGGTCGGTTGATGCTGGAGGCCGAGCAGGTTGCGCTCAACAGCGGCATTCCCGCGAGCATCGTGCGCCTGACCGGC ATTTACGGCCCCGGCCGTGAATGGCTGCTGACCCAAGTGCGTCGTGGCTATCGCGTGGCGGTCGATCCGCCGCTGTATGG CAATCGCATCCATGCCGATGACGCGGCGGGGTTGATGGCGTTCTTGCTGGACGCGGATCGCAAGGGCGTGACGCTGGATG ACATCTATATCGGCGTGGACGATGCGCCGGCGCCGCTGGCCGAGGTGGTGGCGTGGTTGCGGGAATATCTGGGTGTCACC GAATGGTCGGAAGACGAGAGCGTACGTCGCACCGGCAGCAAGCGTTGCAGCAATGCGCGGGCGAAGACGCTGGGCTGGGT GCCGAAGTATCCGAGTTATCGTGAGGGGTATGCCGCGATTCTAGAGGGGCGTTGCTGA
Upstream 100 bases:
>100_bases TTCTTGTTAACAGAAGTAATAGAGTTGCTTTTTTTCCTTCATTGCTAGCCGCTCGTCCCTTGTCGAGGCTAGTCTGTCGC TTTCCGATGGGAGATTTTTG
Downstream 100 bases:
>100_bases CTTTCGAGTGTCAAAAAGGCGGGAGCAAATGTTTGCTCCCGCCTTTTTTGTCTCAAGCGCCGATCACTGCTTCTCGAGCA ACCACTTGCGCTCACCCGGG
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; ActC Family Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family; Sugar Epimerase/Dehydratase-Like Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Epimerase/Dehydratase-Related Protein; Phosphate ABC Transporter Permease; Ketopantoate Reductase ApbA/PanE Domain Protein; NAD Epimerase/Dehydratase Protein; NAD Dependent Epimerase/Dehydratase-Related Protein; NADP Oxidoreductase Co; NAD Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSAPSVLIAGCGDVGSRLATQLLAAGFQVYGLRRDISRLPDGVIGVAGDLFNEDCPATWPVGAIDYLVYSAAATDHDEAG YRAAYVQGLQHVLGWLNDYGQEPERLLFVSSSSVYGQQSGEWVDEKSETVAAGYSGRLMLEAEQVALNSGIPASIVRLTG IYGPGREWLLTQVRRGYRVAVDPPLYGNRIHADDAAGLMAFLLDADRKGVTLDDIYIGVDDAPAPLAEVVAWLREYLGVT EWSEDESVRRTGSKRCSNARAKTLGWVPKYPSYREGYAAILEGRC
Sequences:
>Translated_285_residues MSAPSVLIAGCGDVGSRLATQLLAAGFQVYGLRRDISRLPDGVIGVAGDLFNEDCPATWPVGAIDYLVYSAAATDHDEAG YRAAYVQGLQHVLGWLNDYGQEPERLLFVSSSSVYGQQSGEWVDEKSETVAAGYSGRLMLEAEQVALNSGIPASIVRLTG IYGPGREWLLTQVRRGYRVAVDPPLYGNRIHADDAAGLMAFLLDADRKGVTLDDIYIGVDDAPAPLAEVVAWLREYLGVT EWSEDESVRRTGSKRCSNARAKTLGWVPKYPSYREGYAAILEGRC >Mature_284_residues SAPSVLIAGCGDVGSRLATQLLAAGFQVYGLRRDISRLPDGVIGVAGDLFNEDCPATWPVGAIDYLVYSAAATDHDEAGY RAAYVQGLQHVLGWLNDYGQEPERLLFVSSSSVYGQQSGEWVDEKSETVAAGYSGRLMLEAEQVALNSGIPASIVRLTGI YGPGREWLLTQVRRGYRVAVDPPLYGNRIHADDAAGLMAFLLDADRKGVTLDDIYIGVDDAPAPLAEVVAWLREYLGVTE WSEDESVRRTGSKRCSNARAKTLGWVPKYPSYREGYAAILEGRC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30927; Mature: 30796
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPSVLIAGCGDVGSRLATQLLAAGFQVYGLRRDISRLPDGVIGVAGDLFNEDCPATWP CCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEHHHHHCCCCCCCCCC VGAIDYLVYSAAATDHDEAGYRAAYVQGLQHVLGWLNDYGQEPERLLFVSSSSVYGQQSG CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC EWVDEKSETVAAGYSGRLMLEAEQVALNSGIPASIVRLTGIYGPGREWLLTQVRRGYRVA CCCCCCCCEEECCCCCEEEEEHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCEEE VDPPLYGNRIHADDAAGLMAFLLDADRKGVTLDDIYIGVDDAPAPLAEVVAWLREYLGVT ECCCCCCCEECCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCC EWSEDESVRRTGSKRCSNARAKTLGWVPKYPSYREGYAAILEGRC CCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCHHCCHHHHHCCCC >Mature Secondary Structure SAPSVLIAGCGDVGSRLATQLLAAGFQVYGLRRDISRLPDGVIGVAGDLFNEDCPATWP CCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEHHHHHCCCCCCCCCC VGAIDYLVYSAAATDHDEAGYRAAYVQGLQHVLGWLNDYGQEPERLLFVSSSSVYGQQSG CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC EWVDEKSETVAAGYSGRLMLEAEQVALNSGIPASIVRLTGIYGPGREWLLTQVRRGYRVA CCCCCCCCEEECCCCCEEEEEHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCEEE VDPPLYGNRIHADDAAGLMAFLLDADRKGVTLDDIYIGVDDAPAPLAEVVAWLREYLGVT ECCCCCCCEECCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCC EWSEDESVRRTGSKRCSNARAKTLGWVPKYPSYREGYAAILEGRC CCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCHHCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA