| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77461742
Identifier: 77461742
GI number: 77461742
Start: 6190332
End: 6192254
Strand: Reverse
Name: 77461742
Synonym: Pfl01_5521
Alternate gene names: NA
Gene position: 6192254-6190332 (Counterclockwise)
Preceding gene: 77461743
Following gene: 77461739
Centisome position: 96.18
GC content: 61.78
Gene sequence:
>1923_bases ATGGTGCAGTTGTGTTCTATCGAACAGGCTGTGGACGACGTGCTGGCGCGGTTGCCGGCGCACATCCACATGGGTCTGCC GCTGGGGCTGGGCAAACCCAATCCCTTCGTCAACGCGCTGTACCGGCGGGTCGCCGGATTGCCCGAACGTCAGCTGACGA TCTACACCGCCCTGTGCCTCGGCCGCCCGACGCTGGGCGATGGTTTGCAGAAGCGCTTCATCGAGCCCTTCGTCGAGTGG GTGTTCGGTAATTACCCGGAGCTGGAATTCCTTGCCGACCTGCACCGCGACAGCCTGCCGTCCAACATCCGCATCGAGCA ATTCTTCATGCAGCCGGGCAGCCTGCTCAACAGCGCGCCGGCCCAGCAGGATTACGTCAGCAGCAACTACAGCCACGCCG CCCGCGACATCAACGCCGCCGGCCTGAATCTGGTGGCGCAGTTGCTTGCCAGCAGCAGCGAACACCCGGATCGTCTGAGC CTCAGTTGCAACCCTGACATCACCCTCGACCTGTTCCCGATGATCGCCAAACGCCGGGCGGCGGGGGAGACCATTCTGCT GGTCGGCCAGGTGCACACCGAGTTGCCGTACATGCCGGGCGACGCCGAAGTCGAGATCGATACCTTCGACCTGCTGATCG ACGAGAAGGACAGCAGCACACTGTTTTCCACGCCGAACATGCCTGTCGGGTTTCAGGATCACTTCATCGGATTGCACGCC AGTACGTTGGTACGCGATGGCGGCACCTTGCAGATCGGCATCGGTTCGATGGGCGACGCGCTGACCGCCGCATTGCTGGC GCGGCAGGCCGACAACGCCGGTTACCAGGCCTTGCTGGCCGATGTGAACCTCAGCCAGTGGGCGCAGTTGATCGAACGCG AGGGCGGCATCGAGCCGTTCGCCAAAGGCCTGTACGGTTGCAGCGAAATGTTCGTCAACGGTCTGCTGGTGCTGGCCGAG GCCGGGATCATCCGGCGCAAGGTTTACCCGGATGTACAGACTCAGGAGCAGGCCAACGCCGGAATCCTCGACGAGGCGGC GCAAACCGACGGCATTTCAGTGCACGGCGGCTTCTTTCTCGGGCCGCGCAGTTTCTATGAGCGCTTGCGTGAGTTGCCGC TGAGCAAACGCCTCGAATTCAACATGACCCGCATCAGCTATATCAACGAGCTGTACGGCCAGGAAGAGCTCAAACGCCTG CAGCGTCTGGATGCGCGGTTCATCAACACTGTGTTCACCATGACCCTGCTGGGTGCCGGGGTGGCGGATCAACTGGAAGA CGGACGGGTACTCAGCGGCGTCGGCGGGCAGTACAACTTCGTTGCCCAGGGCCATGCGCTGCACGATGCGCGCTCGATCC TGCTGCTGCGCAGCTGGCGCGAATCCGGCGGCGATGTCAGTTCGAACATTGTCTGGGAGTACGGCCACTGCACGATTCCG CGACACCTGCGTGACATCGTAATCACCGAGTACGGTATCGCCGATTTGCGCGGCAAGTCGGATGCGGTGGTGATCGAAGC GCTGCTCAATATCAGCGATTCACGCTTCCAGCAGGGCCTGATCGAACAGGCACAGAAGGTCGGCAAGCTACCGAAGGATT TCCGTCTCGACCCGCGCTTTACCGACAATACCCCGCAACGCTTGCAGGCGATTGCCGCACGGCATCCGAACCTGTTTCCG GAGTATCCGCTGGGCTGCGATTTCACGGAGGTCGAAAAGGATCTGTTGCGGGCGCTGAACTGGCTCAAGAGCAAGTTCAA GCTGACGGAGATTCTGGAGTTGGGCAAGGCCGCGCTGGATGCGCCGCAGGCTTCGCTGTATCCGGAGCATCTGGCGCGCA TGCAGCTCACCGATCCGGAAGGACTGAAGGAAGACCTGTTTCAGCGGTTGCTCCTCACCGGCCTCAAAGCTACCGGGCAA TAA
Upstream 100 bases:
>100_bases TTTTTTTGTGCCCGCGGTTCAGGCCTGAGACTGTTCTTTGCAGCAAACAACCGACAATCTCGGTCGTACCTCTATTCACG GAACGGGCAGGAGGCTTCAG
Downstream 100 bases:
>100_bases TGTTCACCGTAAAACCAACTGTGGGAGCGGGCTTGCTCGCGAAGACGCCGTGTCAGTCGACCTATACTTTGACTGACACA ACGCCTTCGCGAGCAAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyl-CoA Hydrolase/Transferase Family Protein; Acetyl-CoA Hydrolase-Like Protein; 4-Hydroxybutyrate CoA-Transferase AbfT; Acetyl-Coa Hydrolase/Transferase Protein
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MVQLCSIEQAVDDVLARLPAHIHMGLPLGLGKPNPFVNALYRRVAGLPERQLTIYTALCLGRPTLGDGLQKRFIEPFVEW VFGNYPELEFLADLHRDSLPSNIRIEQFFMQPGSLLNSAPAQQDYVSSNYSHAARDINAAGLNLVAQLLASSSEHPDRLS LSCNPDITLDLFPMIAKRRAAGETILLVGQVHTELPYMPGDAEVEIDTFDLLIDEKDSSTLFSTPNMPVGFQDHFIGLHA STLVRDGGTLQIGIGSMGDALTAALLARQADNAGYQALLADVNLSQWAQLIEREGGIEPFAKGLYGCSEMFVNGLLVLAE AGIIRRKVYPDVQTQEQANAGILDEAAQTDGISVHGGFFLGPRSFYERLRELPLSKRLEFNMTRISYINELYGQEELKRL QRLDARFINTVFTMTLLGAGVADQLEDGRVLSGVGGQYNFVAQGHALHDARSILLLRSWRESGGDVSSNIVWEYGHCTIP RHLRDIVITEYGIADLRGKSDAVVIEALLNISDSRFQQGLIEQAQKVGKLPKDFRLDPRFTDNTPQRLQAIAARHPNLFP EYPLGCDFTEVEKDLLRALNWLKSKFKLTEILELGKAALDAPQASLYPEHLARMQLTDPEGLKEDLFQRLLLTGLKATGQ
Sequences:
>Translated_640_residues MVQLCSIEQAVDDVLARLPAHIHMGLPLGLGKPNPFVNALYRRVAGLPERQLTIYTALCLGRPTLGDGLQKRFIEPFVEW VFGNYPELEFLADLHRDSLPSNIRIEQFFMQPGSLLNSAPAQQDYVSSNYSHAARDINAAGLNLVAQLLASSSEHPDRLS LSCNPDITLDLFPMIAKRRAAGETILLVGQVHTELPYMPGDAEVEIDTFDLLIDEKDSSTLFSTPNMPVGFQDHFIGLHA STLVRDGGTLQIGIGSMGDALTAALLARQADNAGYQALLADVNLSQWAQLIEREGGIEPFAKGLYGCSEMFVNGLLVLAE AGIIRRKVYPDVQTQEQANAGILDEAAQTDGISVHGGFFLGPRSFYERLRELPLSKRLEFNMTRISYINELYGQEELKRL QRLDARFINTVFTMTLLGAGVADQLEDGRVLSGVGGQYNFVAQGHALHDARSILLLRSWRESGGDVSSNIVWEYGHCTIP RHLRDIVITEYGIADLRGKSDAVVIEALLNISDSRFQQGLIEQAQKVGKLPKDFRLDPRFTDNTPQRLQAIAARHPNLFP EYPLGCDFTEVEKDLLRALNWLKSKFKLTEILELGKAALDAPQASLYPEHLARMQLTDPEGLKEDLFQRLLLTGLKATGQ >Mature_640_residues MVQLCSIEQAVDDVLARLPAHIHMGLPLGLGKPNPFVNALYRRVAGLPERQLTIYTALCLGRPTLGDGLQKRFIEPFVEW VFGNYPELEFLADLHRDSLPSNIRIEQFFMQPGSLLNSAPAQQDYVSSNYSHAARDINAAGLNLVAQLLASSSEHPDRLS LSCNPDITLDLFPMIAKRRAAGETILLVGQVHTELPYMPGDAEVEIDTFDLLIDEKDSSTLFSTPNMPVGFQDHFIGLHA STLVRDGGTLQIGIGSMGDALTAALLARQADNAGYQALLADVNLSQWAQLIEREGGIEPFAKGLYGCSEMFVNGLLVLAE AGIIRRKVYPDVQTQEQANAGILDEAAQTDGISVHGGFFLGPRSFYERLRELPLSKRLEFNMTRISYINELYGQEELKRL QRLDARFINTVFTMTLLGAGVADQLEDGRVLSGVGGQYNFVAQGHALHDARSILLLRSWRESGGDVSSNIVWEYGHCTIP RHLRDIVITEYGIADLRGKSDAVVIEALLNISDSRFQQGLIEQAQKVGKLPKDFRLDPRFTDNTPQRLQAIAARHPNLFP EYPLGCDFTEVEKDLLRALNWLKSKFKLTEILELGKAALDAPQASLYPEHLARMQLTDPEGLKEDLFQRLLLTGLKATGQ
Specific function: Unknown
COG id: COG0427
COG function: function code C; Acetyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70900; Mature: 70900
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQLCSIEQAVDDVLARLPAHIHMGLPLGLGKPNPFVNALYRRVAGLPERQLTIYTALCL CCEEHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH GRPTLGDGLQKRFIEPFVEWVFGNYPELEFLADLHRDSLPSNIRIEQFFMQPGSLLNSAP CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHCCC AQQDYVSSNYSHAARDINAAGLNLVAQLLASSSEHPDRLSLSCNPDITLDLFPMIAKRRA CHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHC AGETILLVGQVHTELPYMPGDAEVEIDTFDLLIDEKDSSTLFSTPNMPVGFQDHFIGLHA CCCEEEEEEEHHHCCCCCCCCCEEEEEEEEEEEECCCCCCEEECCCCCCCCCHHEEEEEH STLVRDGGTLQIGIGSMGDALTAALLARQADNAGYQALLADVNLSQWAQLIEREGGIEPF HHHEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHEECCCHHHHHHHHHHCCCCCHH AKGLYGCSEMFVNGLLVLAEAGIIRRKVYPDVQTQEQANAGILDEAAQTDGISVHGGFFL HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHCCCCCHHHHHCCCCEEECCCEEE GPRSFYERLRELPLSKRLEFNMTRISYINELYGQEELKRLQRLDARFINTVFTMTLLGAG CHHHHHHHHHHCCCHHCHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC VADQLEDGRVLSGVGGQYNFVAQGHALHDARSILLLRSWRESGGDVSSNIVWEYGHCTIP CHHHHCCCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCH RHLRDIVITEYGIADLRGKSDAVVIEALLNISDSRFQQGLIEQAQKVGKLPKDFRLDPRF HHHHHHHHHHCCCHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC TDNTPQRLQAIAARHPNLFPEYPLGCDFTEVEKDLLRALNWLKSKFKLTEILELGKAALD CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APQASLYPEHLARMQLTDPEGLKEDLFQRLLLTGLKATGQ CCCHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVQLCSIEQAVDDVLARLPAHIHMGLPLGLGKPNPFVNALYRRVAGLPERQLTIYTALCL CCEEHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH GRPTLGDGLQKRFIEPFVEWVFGNYPELEFLADLHRDSLPSNIRIEQFFMQPGSLLNSAP CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHCCC AQQDYVSSNYSHAARDINAAGLNLVAQLLASSSEHPDRLSLSCNPDITLDLFPMIAKRRA CHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHC AGETILLVGQVHTELPYMPGDAEVEIDTFDLLIDEKDSSTLFSTPNMPVGFQDHFIGLHA CCCEEEEEEEHHHCCCCCCCCCEEEEEEEEEEEECCCCCCEEECCCCCCCCCHHEEEEEH STLVRDGGTLQIGIGSMGDALTAALLARQADNAGYQALLADVNLSQWAQLIEREGGIEPF HHHEECCCEEEEECCCCHHHHHHHHHHHHCCCCCCCHHEECCCHHHHHHHHHHCCCCCHH AKGLYGCSEMFVNGLLVLAEAGIIRRKVYPDVQTQEQANAGILDEAAQTDGISVHGGFFL HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHCCCCCHHHHHCCCCEEECCCEEE GPRSFYERLRELPLSKRLEFNMTRISYINELYGQEELKRLQRLDARFINTVFTMTLLGAG CHHHHHHHHHHCCCHHCHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC VADQLEDGRVLSGVGGQYNFVAQGHALHDARSILLLRSWRESGGDVSSNIVWEYGHCTIP CHHHHCCCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCH RHLRDIVITEYGIADLRGKSDAVVIEALLNISDSRFQQGLIEQAQKVGKLPKDFRLDPRF HHHHHHHHHHCCCHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC TDNTPQRLQAIAARHPNLFPEYPLGCDFTEVEKDLLRALNWLKSKFKLTEILELGKAALD CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APQASLYPEHLARMQLTDPEGLKEDLFQRLLLTGLKATGQ CCCHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA