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The map label for this gene is 77461743

Identifier: 77461743

GI number: 77461743

Start: 6192391

End: 6192807

Strand: Reverse

Name: 77461743

Synonym: Pfl01_5522

Alternate gene names: NA

Gene position: 6192807-6192391 (Counterclockwise)

Preceding gene: 77461744

Following gene: 77461742

Centisome position: 96.19

GC content: 63.31

Gene sequence:

>417_bases
ATGAAAATGCTGGCTGCACCAGCAACCGTACTGGCCCTCTGGGCTGTCAGCGCTCAAGCTGCGACGAATGACGACATTGC
CAAGCGCCTTGAGCCGGTCGGCCAGGTGTGTGTTCAAGGGCAAGAGTGCAAGGGGATGGAAGTCGCTGCTTCGGCAGGCG
GCGGTGGCGGCGCCAAGACGCCGGACGAAGTGATTGCCAAACATTGCAACGCTTGCCACGGCTCCGGCCTGTTGGGCGCG
CCGAAAATCGGTGACACCGCAGCCTGGAAAGAGCGCGCCGATCACCAGGGCGGCCTCGACGGCATCCTGGCCAAGGCCAT
CACCGGCATCAACTCCATGCCGCCGAAAGGCACCTGCGCCGACTGCTCGGACGACGAGCTGAAGGGCGCCATCCAGAAGA
TGTCCGGCCTGAAATAA

Upstream 100 bases:

>100_bases
GTTTCAGTGAAGCGGGCTAACCGCTATACTTGCGCCCGCCTGCGAACCGTGGCCGCAGGCGTGAATAGCCACCATTGAGG
GTGAACGCGTGAACCTAATT

Downstream 100 bases:

>100_bases
GCCGCACTTCTGATGAAAAAAACCGTCTCCGGACGGTTTTTTTGTGCCCGCGGTTCAGGCCTGAGACTGTTCTTTGCAGC
AAACAACCGACAATCTCGGT

Product: cytochrome c5

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKMLAAPATVLALWAVSAQAATNDDIAKRLEPVGQVCVQGQECKGMEVAASAGGGGGAKTPDEVIAKHCNACHGSGLLGA
PKIGDTAAWKERADHQGGLDGILAKAITGINSMPPKGTCADCSDDELKGAIQKMSGLK

Sequences:

>Translated_138_residues
MKMLAAPATVLALWAVSAQAATNDDIAKRLEPVGQVCVQGQECKGMEVAASAGGGGGAKTPDEVIAKHCNACHGSGLLGA
PKIGDTAAWKERADHQGGLDGILAKAITGINSMPPKGTCADCSDDELKGAIQKMSGLK
>Mature_138_residues
MKMLAAPATVLALWAVSAQAATNDDIAKRLEPVGQVCVQGQECKGMEVAASAGGGGGAKTPDEVIAKHCNACHGSGLLGA
PKIGDTAAWKERADHQGGLDGILAKAITGINSMPPKGTCADCSDDELKGAIQKMSGLK

Specific function: It is unreactive with cytochrome c reductase or oxidase but seems to function as an intermediate in nitrate respiration of facultative anaerobic pseudmonads [H]

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR002323 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13897; Mature: 13897

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMLAAPATVLALWAVSAQAATNDDIAKRLEPVGQVCVQGQECKGMEVAASAGGGGGAKT
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCC
PDEVIAKHCNACHGSGLLGAPKIGDTAAWKERADHQGGLDGILAKAITGINSMPPKGTCA
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC
DCSDDELKGAIQKMSGLK
CCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKMLAAPATVLALWAVSAQAATNDDIAKRLEPVGQVCVQGQECKGMEVAASAGGGGGAKT
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCC
PDEVIAKHCNACHGSGLLGAPKIGDTAAWKERADHQGGLDGILAKAITGINSMPPKGTCA
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC
DCSDDELKGAIQKMSGLK
CCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA