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The map label for this gene is algP [H]

Identifier: 77461701

GI number: 77461701

Start: 6148013

End: 6149155

Strand: Reverse

Name: algP [H]

Synonym: Pfl01_5480

Alternate gene names: 77461701

Gene position: 6149155-6148013 (Counterclockwise)

Preceding gene: 255961262

Following gene: 77461699

Centisome position: 95.51

GC content: 61.68

Gene sequence:

>1143_bases
ATGTCGGCCACCAAGAAGCCTGTAAACACTCCGTTGCATTTACTCCAACAACTCTCGGGCAGCCTGCTCGAGCATCTGGA
AAACGCTTGCTCCCAAGCCTTGGCTGATGCTGAAAAACTGCTCGCCAAACTGGAAAAGCAACGCGGCAAGGCGCAAGAAA
AACTGCACAAATCCCGCACCAAATTGCAGGACGCAGCAGCAGCCGGTAAAGCCAAGGCGCAGACCAAGGCCAAGGCTGCC
GTGAAGGAACTCGAAGATCTGCTCGATGCGCTGAAGGAGCGTCAGTCCGATACTCGCAGCTACATTCTGCAACTCAAGCG
CGATGCCCAGGAAAGCCTGAAACTGGCCCAGGGTGTCGGTCGTGTTCAAGAAGCTGTCGGCAAGGCGTTGTCCCTGCGTT
CGGCTAAACCTGCAGCGGTGCCTGCGAAAAAAGCGGCCGCCAGACCTGCTGCAAAAGCACCGGCCAAAGCGTCAGTGAAA
GCCGCTGCAAAACCAGCCGCGAAGCAACCCGCAGCCAGCGCTGCCAAACCTGCGGCTAAAACCACAGCGGCCAAACCGGC
TGCTGCAAAACCAGCCGCCAAACCTGCGGCGAAAACCGCTGCTGCGAAAGCGGCTCCGGCAAGAACTGCCGCTGCAAAAC
CAGCTGCCAAGCCAGCCACCAAAGTGGCCGCTAAACCGGCAGCAAAACCAGCCGTTAAAGCGGCTGCTAAACCAGCTGCC
AAAACTGCTGCTGCCAAGCCTGCGGCGAAAAACGCTGCCAAGCCGGTTGCTGCCAAACCAGCAGCCAAAGCGGCGGCGAA
ACCAGCGGCCAAGCCTGCGGTAAAAGCTGCGGCCAAACCTGCTGCTGCAGCGAAGCCTGCAACGACCGCAGCCAAGCCAG
CGACCGCTGCCAAACCGGCCGCCAAGCCAGCCGCGAAACCTGCGGTGAAAAAACCTGCCGCTGCCAAGCCGGCTGCCGCC
AAGCCAGCAGCAAAACCAGCTGCAGCAAAACCGGCCACTGCGCCTGCTGCCAAACCTGCCGCACCGGCAACCCCGGCTCC
GACCGCAGCACCGGCATCCGCCGCCCCTACCTCGACCACCGCAACCACGCCATCGTCGGCGCCGGTGTCGAGCGTCGCCA
GCAACCCGTCCAGCGCTTCCTAA

Upstream 100 bases:

>100_bases
AGCCTGCAACCGAGTGCTTTCGATACTGTCAACATGCCCTAGCGGCGGTAGCAGCAGAGGTCTAGTATGAGCCGCACTCA
CGTCAGCCAGGAGGTAAACC

Downstream 100 bases:

>100_bases
GCGCCGGTCGCCGCGACGCGCAGCACCTGCAGCGCGTCGCGGTTCAGGTTGGCCGCAGGGCCGGCCAGTACTTCCAGCCA
GTCACTCGATTCTTTCGAAT

Product: CheA Signal transduction histidine kinase

Products: NA

Alternate protein names: Alginate regulatory protein AlgR3 [H]

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MSATKKPVNTPLHLLQQLSGSLLEHLENACSQALADAEKLLAKLEKQRGKAQEKLHKSRTKLQDAAAAGKAKAQTKAKAA
VKELEDLLDALKERQSDTRSYILQLKRDAQESLKLAQGVGRVQEAVGKALSLRSAKPAAVPAKKAAARPAAKAPAKASVK
AAAKPAAKQPAASAAKPAAKTTAAKPAAAKPAAKPAAKTAAAKAAPARTAAAKPAAKPATKVAAKPAAKPAVKAAAKPAA
KTAAAKPAAKNAAKPVAAKPAAKAAAKPAAKPAVKAAAKPAAAAKPATTAAKPATAAKPAAKPAAKPAVKKPAAAKPAAA
KPAAKPAAAKPATAPAAKPAAPATPAPTAAPASAAPTSTTATTPSSAPVSSVASNPSSAS

Sequences:

>Translated_380_residues
MSATKKPVNTPLHLLQQLSGSLLEHLENACSQALADAEKLLAKLEKQRGKAQEKLHKSRTKLQDAAAAGKAKAQTKAKAA
VKELEDLLDALKERQSDTRSYILQLKRDAQESLKLAQGVGRVQEAVGKALSLRSAKPAAVPAKKAAARPAAKAPAKASVK
AAAKPAAKQPAASAAKPAAKTTAAKPAAAKPAAKPAAKTAAAKAAPARTAAAKPAAKPATKVAAKPAAKPAVKAAAKPAA
KTAAAKPAAKNAAKPVAAKPAAKAAAKPAAKPAVKAAAKPAAAAKPATTAAKPATAAKPAAKPAAKPAVKKPAAAKPAAA
KPAAKPAAAKPATAPAAKPAAPATPAPTAAPASAAPTSTTATTPSSAPVSSVASNPSSAS
>Mature_379_residues
SATKKPVNTPLHLLQQLSGSLLEHLENACSQALADAEKLLAKLEKQRGKAQEKLHKSRTKLQDAAAAGKAKAQTKAKAAV
KELEDLLDALKERQSDTRSYILQLKRDAQESLKLAQGVGRVQEAVGKALSLRSAKPAAVPAKKAAARPAAKAPAKASVKA
AAKPAAKQPAASAAKPAAKTTAAKPAAAKPAAKPAAKTAAAKAAPARTAAAKPAAKPATKVAAKPAAKPAVKAAAKPAAK
TAAAKPAAKNAAKPVAAKPAAKAAAKPAAKPAVKAAAKPAAAAKPATTAAKPATAAKPAAKPAAKPAVKKPAAAKPAAAK
PAAKPAAAKPATAPAAKPAAPATPAPTAAPASAAPTSTTATTPSSAPVSSVASNPSSAS

Specific function: The promoter for a critical alginate biosynthetic gene, AlgD, encoding GDP-mannose dehydrogenase, is activated only under conditions reminiscent of the cystic fibrosis lung (i.e., under high osmolarity), and at least two regulatory genes, AlgP and AlgQ, h

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36951; Mature: 36820

Theoretical pI: Translated: 11.48; Mature: 11.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATKKPVNTPLHLLQQLSGSLLEHLENACSQALADAEKLLAKLEKQRGKAQEKLHKSRT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLQDAAAAGKAKAQTKAKAAVKELEDLLDALKERQSDTRSYILQLKRDAQESLKLAQGVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVQEAVGKALSLRSAKPAAVPAKKAAARPAAKAPAKASVKAAAKPAAKQPAASAAKPAAK
HHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCHHCCCCHHHHCCHHH
TTAAKPAAAKPAAKPAAKTAAAKAAPARTAAAKPAAKPATKVAAKPAAKPAVKAAAKPAA
HHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
KTAAAKPAAKNAAKPVAAKPAAKAAAKPAAKPAVKAAAKPAAAAKPATTAAKPATAAKPA
HHHHCCCHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHCCHHHCCCCCCCCCCCHHCCCC
AKPAAKPAVKKPAAAKPAAAKPAAKPAAAKPATAPAAKPAAPATPAPTAAPASAAPTSTT
CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATTPSSAPVSSVASNPSSAS
CCCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure 
SATKKPVNTPLHLLQQLSGSLLEHLENACSQALADAEKLLAKLEKQRGKAQEKLHKSRT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLQDAAAAGKAKAQTKAKAAVKELEDLLDALKERQSDTRSYILQLKRDAQESLKLAQGVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVQEAVGKALSLRSAKPAAVPAKKAAARPAAKAPAKASVKAAAKPAAKQPAASAAKPAAK
HHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCHHCCCCHHHHCCHHH
TTAAKPAAAKPAAKPAAKTAAAKAAPARTAAAKPAAKPATKVAAKPAAKPAVKAAAKPAA
HHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
KTAAAKPAAKNAAKPVAAKPAAKAAAKPAAKPAVKAAAKPAAAAKPATTAAKPATAAKPA
HHHHCCCHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHCCHHHCCCCCCCCCCCHHCCCC
AKPAAKPAVKKPAAAKPAAAKPAAKPAAAKPATAPAAKPAAPATPAPTAAPASAAPTSTT
CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATTPSSAPVSSVASNPSSAS
CCCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2514124; 2109318; 1698761; 2110144; 10984043 [H]