The gene/protein map for NC_007492 is currently unavailable.
Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is ywbL [H]

Identifier: 77461691

GI number: 77461691

Start: 6137427

End: 6139322

Strand: Reverse

Name: ywbL [H]

Synonym: Pfl01_5470

Alternate gene names: 77461691

Gene position: 6139322-6137427 (Counterclockwise)

Preceding gene: 77461697

Following gene: 77461690

Centisome position: 95.35

GC content: 65.3

Gene sequence:

>1896_bases
ATGACTGCCGCGTCCCGATTTCTGGCCTGGCTGGTGTTCCCGTTGTGCGCCCTGAGCAGCTTCAATCTGCTGGCCGACAC
CGTGGAAGGCGCGCCGCAAGCGCTGCACCTGCTCGATTACATCAGCGCCGATTACCCGCCGACGGTTGAGGCAGGCAAGG
TCATTGACGACGGCGAATACCGCGAGCAGCTGGAATTCACCCAAGTGCTGCAAGGGCTGATCGCCGGCCTGCCGGCCAAG
CCGGAAAAAGTGGCGCTGGAGCAGGGCGTCACTGCCTTGCACGCCGCGATCACGGCGAAACAGGATGGCGCGGACGTCGC
CCGTCAGGCCCGGCAACTGGGGGCGAAACTGGCGGTGGCCTATGAAGTCAGCCAGGCCCCGATCATCACGCCTGATCCGA
CCCGTGGTGCGCCGCTCTACGCGCAAAACTGCTCGGTGTGCCACGGCGACGCGGGTGCCGGCGACGGCCCGGCAGGTCTC
GGCATGACGCCGGCGCCAGCCAATCTGCGCGATACTGCGCGGATGGATCACCTGAGCCTGTACGCGATCTACAGCACCCT
CGGCCAGGGCGTCGAAGGCACTGACATGCCAGCCTTTGCCGATCAACTGGACGACCGTCAGCGCTGGGATCTGGCGACCT
ATATCGCGCAGTTCAGCGCCGATCCGGCCACGGCCAAATCCGACAAGACCTACAATATCGCCGACCTGGCCCGCCAGACC
CCGGCCGAAGTGCAGGCCGCCGAAGGCCCTGAAGCCGCGGCGATCTTCCGTGTACAACGGGCGCAGCCGCCGCAGGTCAA
ACGCGGCCCGGCGCAGTTGCTCGACTACACTGCCGCGACGCTGGACAAGAGCCTGGCGGCGTACCGCGCCGGTGAACACG
ATCAGGCTTACGACCTGTCGGTGGCGGCGTATCTGGAAGGCTTCGAACTGGTCGAGAGCTCGCTGGACAACGTCGACGCC
AACGTGCGCAAGGACACCGAAAAATCCCTGATGGCCTATCGGCAATCGCTGCAGGACGGCTTGCCGGTCGAGCAGGCCGA
ACAGCGTCTTGACGCGGCCAAGGCCAAACTCAAGGAGTCTGCCGGCCTGTTGGGCAGCGATGGATTGAGCTGGTCGCTGA
GCTACATTTCCGGTCTGCTGATTCTGCTGCGCGAAGGCCTGGAAGCGATTCTGGTGCTGGCGGCGATCCTCGCGTTCCTG
CGCAACACCGGCCAGCAATCGGCGGTGCGCAGCGTCAACGTCGGCTGGGGGCTGGCGCTGCTGGCTGGCCTGGGAACCTG
GGCGCTGGCGGCCTATGTGATCGATGTCAGCGGCTCCCAGCGTGAGCTGTTGGAAGGCGCCACGGCGCTGTTCGCCAGCG
TCATGGTGTTGTGGCTCGGGGTGTGGATGCACGACCGTCGGCACGCGGCGGCCTGGCAGGATTACATCAAGCAGAGTCTG
GTTGGCGGAGGCGGGCGTTTCGGGTTTGCGATCCTGGCATTCTTCTCGGTGTACCGCGAACTGTTCGAAGTGATCCTGTT
CTACGAAACCCTGTGGCTGCAGGCCGGTCCCGCCGGGCATAACGCGGTACTTGCTGGTGGTGCGACGGCATTGGTGTTGC
TGTTCGGTCTGGCGTGGGTGATCCTGCGCGGCTCGGCGAAACTGCCGCTGGCGCTGTTCTTCAGCATCAACGCAGCGCTG
CTGTGCGCGTTGTCGGTGGTGTTTGCCGGCCACGGCGTGAAGGCGCTGCAGGAAGCCGGGATCTTCGGTACCCGGCCGGT
GGCGTTCTTCGATTTCGACTGGCTGGGGATTCACGCCGATGCGTATTCGCTGACGGCGCAGGCCGTGGCGATCGCGGCGA
TCATCGTGCTGTACGGTCGCAGTCGGGTGGCTGAAAAGCGCCGAGTGGCGGCTTGA

Upstream 100 bases:

>100_bases
GTGGGCGGTGGCCATGTGCCGGGTATTGGAGAGAAAGCTTGAGGGAATCGCGCTCGAAGTGAACAATATGTAACTTCGCA
TTTCCACTTGAGACTCATTC

Downstream 100 bases:

>100_bases
GATGATGCGCGTATGGATCGATGCCGACGCTTGCCCGAAGATGGCCAAGGAGTTGGTGGTCAAGTTCGCCCTCAAGCGCC
GCTTCGAAGTGGTGCTGGTG

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 631; Mature: 630

Protein sequence:

>631_residues
MTAASRFLAWLVFPLCALSSFNLLADTVEGAPQALHLLDYISADYPPTVEAGKVIDDGEYREQLEFTQVLQGLIAGLPAK
PEKVALEQGVTALHAAITAKQDGADVARQARQLGAKLAVAYEVSQAPIITPDPTRGAPLYAQNCSVCHGDAGAGDGPAGL
GMTPAPANLRDTARMDHLSLYAIYSTLGQGVEGTDMPAFADQLDDRQRWDLATYIAQFSADPATAKSDKTYNIADLARQT
PAEVQAAEGPEAAAIFRVQRAQPPQVKRGPAQLLDYTAATLDKSLAAYRAGEHDQAYDLSVAAYLEGFELVESSLDNVDA
NVRKDTEKSLMAYRQSLQDGLPVEQAEQRLDAAKAKLKESAGLLGSDGLSWSLSYISGLLILLREGLEAILVLAAILAFL
RNTGQQSAVRSVNVGWGLALLAGLGTWALAAYVIDVSGSQRELLEGATALFASVMVLWLGVWMHDRRHAAAWQDYIKQSL
VGGGGRFGFAILAFFSVYRELFEVILFYETLWLQAGPAGHNAVLAGGATALVLLFGLAWVILRGSAKLPLALFFSINAAL
LCALSVVFAGHGVKALQEAGIFGTRPVAFFDFDWLGIHADAYSLTAQAVAIAAIIVLYGRSRVAEKRRVAA

Sequences:

>Translated_631_residues
MTAASRFLAWLVFPLCALSSFNLLADTVEGAPQALHLLDYISADYPPTVEAGKVIDDGEYREQLEFTQVLQGLIAGLPAK
PEKVALEQGVTALHAAITAKQDGADVARQARQLGAKLAVAYEVSQAPIITPDPTRGAPLYAQNCSVCHGDAGAGDGPAGL
GMTPAPANLRDTARMDHLSLYAIYSTLGQGVEGTDMPAFADQLDDRQRWDLATYIAQFSADPATAKSDKTYNIADLARQT
PAEVQAAEGPEAAAIFRVQRAQPPQVKRGPAQLLDYTAATLDKSLAAYRAGEHDQAYDLSVAAYLEGFELVESSLDNVDA
NVRKDTEKSLMAYRQSLQDGLPVEQAEQRLDAAKAKLKESAGLLGSDGLSWSLSYISGLLILLREGLEAILVLAAILAFL
RNTGQQSAVRSVNVGWGLALLAGLGTWALAAYVIDVSGSQRELLEGATALFASVMVLWLGVWMHDRRHAAAWQDYIKQSL
VGGGGRFGFAILAFFSVYRELFEVILFYETLWLQAGPAGHNAVLAGGATALVLLFGLAWVILRGSAKLPLALFFSINAAL
LCALSVVFAGHGVKALQEAGIFGTRPVAFFDFDWLGIHADAYSLTAQAVAIAAIIVLYGRSRVAEKRRVAA
>Mature_630_residues
TAASRFLAWLVFPLCALSSFNLLADTVEGAPQALHLLDYISADYPPTVEAGKVIDDGEYREQLEFTQVLQGLIAGLPAKP
EKVALEQGVTALHAAITAKQDGADVARQARQLGAKLAVAYEVSQAPIITPDPTRGAPLYAQNCSVCHGDAGAGDGPAGLG
MTPAPANLRDTARMDHLSLYAIYSTLGQGVEGTDMPAFADQLDDRQRWDLATYIAQFSADPATAKSDKTYNIADLARQTP
AEVQAAEGPEAAAIFRVQRAQPPQVKRGPAQLLDYTAATLDKSLAAYRAGEHDQAYDLSVAAYLEGFELVESSLDNVDAN
VRKDTEKSLMAYRQSLQDGLPVEQAEQRLDAAKAKLKESAGLLGSDGLSWSLSYISGLLILLREGLEAILVLAAILAFLR
NTGQQSAVRSVNVGWGLALLAGLGTWALAAYVIDVSGSQRELLEGATALFASVMVLWLGVWMHDRRHAAAWQDYIKQSLV
GGGGRFGFAILAFFSVYRELFEVILFYETLWLQAGPAGHNAVLAGGATALVLLFGLAWVILRGSAKLPLALFFSINAALL
CALSVVFAGHGVKALQEAGIFGTRPVAFFDFDWLGIHADAYSLTAQAVAIAAIIVLYGRSRVAEKRRVAA

Specific function: Unknown

COG id: COG0672

COG function: function code P; High-affinity Fe2+/Pb2+ permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005217
- InterPro:   IPR004923 [H]

Pfam domain/function: PF03239 FTR1 [H]

EC number: NA

Molecular weight: Translated: 67352; Mature: 67220

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAASRFLAWLVFPLCALSSFNLLADTVEGAPQALHLLDYISADYPPTVEAGKVIDDGEY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
REQLEFTQVLQGLIAGLPAKPEKVALEQGVTALHAAITAKQDGADVARQARQLGAKLAVA
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHEEEE
YEVSQAPIITPDPTRGAPLYAQNCSVCHGDAGAGDGPAGLGMTPAPANLRDTARMDHLSL
EEECCCCCCCCCCCCCCCEEECCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
YAIYSTLGQGVEGTDMPAFADQLDDRQRWDLATYIAQFSADPATAKSDKTYNIADLARQT
HHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC
PAEVQAAEGPEAAAIFRVQRAQPPQVKRGPAQLLDYTAATLDKSLAAYRAGEHDQAYDLS
CCCCCCCCCCCHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
VAAYLEGFELVESSLDNVDANVRKDTEKSLMAYRQSLQDGLPVEQAEQRLDAAKAKLKES
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AGLLGSDGLSWSLSYISGLLILLREGLEAILVLAAILAFLRNTGQQSAVRSVNVGWGLAL
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHH
LAGLGTWALAAYVIDVSGSQRELLEGATALFASVMVLWLGVWMHDRRHAAAWQDYIKQSL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VGGGGRFGFAILAFFSVYRELFEVILFYETLWLQAGPAGHNAVLAGGATALVLLFGLAWV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHH
ILRGSAKLPLALFFSINAALLCALSVVFAGHGVKALQEAGIFGTRPVAFFDFDWLGIHAD
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEECCEEEEECC
AYSLTAQAVAIAAIIVLYGRSRVAEKRRVAA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure 
TAASRFLAWLVFPLCALSSFNLLADTVEGAPQALHLLDYISADYPPTVEAGKVIDDGEY
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
REQLEFTQVLQGLIAGLPAKPEKVALEQGVTALHAAITAKQDGADVARQARQLGAKLAVA
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHEEEE
YEVSQAPIITPDPTRGAPLYAQNCSVCHGDAGAGDGPAGLGMTPAPANLRDTARMDHLSL
EEECCCCCCCCCCCCCCCEEECCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
YAIYSTLGQGVEGTDMPAFADQLDDRQRWDLATYIAQFSADPATAKSDKTYNIADLARQT
HHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCC
PAEVQAAEGPEAAAIFRVQRAQPPQVKRGPAQLLDYTAATLDKSLAAYRAGEHDQAYDLS
CCCCCCCCCCCHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
VAAYLEGFELVESSLDNVDANVRKDTEKSLMAYRQSLQDGLPVEQAEQRLDAAKAKLKES
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AGLLGSDGLSWSLSYISGLLILLREGLEAILVLAAILAFLRNTGQQSAVRSVNVGWGLAL
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHH
LAGLGTWALAAYVIDVSGSQRELLEGATALFASVMVLWLGVWMHDRRHAAAWQDYIKQSL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VGGGGRFGFAILAFFSVYRELFEVILFYETLWLQAGPAGHNAVLAGGATALVLLFGLAWV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHH
ILRGSAKLPLALFFSINAALLCALSVVFAGHGVKALQEAGIFGTRPVAFFDFDWLGIHAD
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEECCEEEEECC
AYSLTAQAVAIAAIIVLYGRSRVAEKRRVAA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]