| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yaiI [C]
Identifier: 77461690
GI number: 77461690
Start: 6136967
End: 6137425
Strand: Reverse
Name: yaiI [C]
Synonym: Pfl01_5469
Alternate gene names: 77461690
Gene position: 6137425-6136967 (Counterclockwise)
Preceding gene: 77461691
Following gene: 77461688
Centisome position: 95.33
GC content: 66.01
Gene sequence:
>459_bases ATGATGCGCGTATGGATCGATGCCGACGCTTGCCCGAAGATGGCCAAGGAGTTGGTGGTCAAGTTCGCCCTCAAGCGCCG CTTCGAAGTGGTGCTGGTGGCGGGGCAGCCGCAGAGCAAGCCGGCGCTGGCGCTCGTCAAGCTGATCGTGGTGCCGAGCG GCCCGGATGCGGCGGACGATTATCTGGTGGAGCACGCGGTGCCGGGTGAACTGGTGATCTGCAGCGACATCCCGCTGGCC GACCGACTGGTGAAGAAGGGTGTGGCGGCGCTGGACCCGCGAGGTAAGGAGTTCGACGCGCAGAACATGGGTGAGCGGCT GGCGACTCGCAATCTGTTCACCGACCTGCGCGAACAGGGCCAGGTCAGCGGCGGCCCGGCACCGTTCGGTGACCGGGAAA AGCAGGCGTTCGCTAATGCGCTGGACCGGATACTGACGCGGCTGGCGCGCCAATCCTGA
Upstream 100 bases:
>100_bases GATGCGTATTCGCTGACGGCGCAGGCCGTGGCGATCGCGGCGATCATCGTGCTGTACGGTCGCAGTCGGGTGGCTGAAAA GCGCCGAGTGGCGGCTTGAG
Downstream 100 bases:
>100_bases GTCTTTGATCGTTCCCACGCTCTGCGCGGAAACGATCAGCGCCGCCAGTCAGGCGTCGTTTTCGTGGGTCAGTTCCAACA CCCGATCCACCAGCTTGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MMRVWIDADACPKMAKELVVKFALKRRFEVVLVAGQPQSKPALALVKLIVVPSGPDAADDYLVEHAVPGELVICSDIPLA DRLVKKGVAALDPRGKEFDAQNMGERLATRNLFTDLREQGQVSGGPAPFGDREKQAFANALDRILTRLARQS
Sequences:
>Translated_152_residues MMRVWIDADACPKMAKELVVKFALKRRFEVVLVAGQPQSKPALALVKLIVVPSGPDAADDYLVEHAVPGELVICSDIPLA DRLVKKGVAALDPRGKEFDAQNMGERLATRNLFTDLREQGQVSGGPAPFGDREKQAFANALDRILTRLARQS >Mature_152_residues MMRVWIDADACPKMAKELVVKFALKRRFEVVLVAGQPQSKPALALVKLIVVPSGPDAADDYLVEHAVPGELVICSDIPLA DRLVKKGVAALDPRGKEFDAQNMGERLATRNLFTDLREQGQVSGGPAPFGDREKQAFANALDRILTRLARQS
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family [H]
Homologues:
Organism=Escherichia coli, GI87081732, Length=149, Percent_Identity=38.255033557047, Blast_Score=113, Evalue=7e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003791 [H]
Pfam domain/function: PF02639 DUF188 [H]
EC number: NA
Molecular weight: Translated: 16607; Mature: 16607
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRVWIDADACPKMAKELVVKFALKRRFEVVLVAGQPQSKPALALVKLIVVPSGPDAADD CEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHH YLVEHAVPGELVICSDIPLADRLVKKGVAALDPRGKEFDAQNMGERLATRNLFTDLREQG HHHHHCCCCCEEEECCCCHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC QVSGGPAPFGDREKQAFANALDRILTRLARQS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMRVWIDADACPKMAKELVVKFALKRRFEVVLVAGQPQSKPALALVKLIVVPSGPDAADD CEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHH YLVEHAVPGELVICSDIPLADRLVKKGVAALDPRGKEFDAQNMGERLATRNLFTDLREQG HHHHHCCCCCEEEECCCCHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC QVSGGPAPFGDREKQAFANALDRILTRLARQS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA