| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459997
Identifier: 77459997
GI number: 77459997
Start: 4271513
End: 4272592
Strand: Direct
Name: 77459997
Synonym: Pfl01_3775
Alternate gene names: NA
Gene position: 4271513-4272592 (Clockwise)
Preceding gene: 77459992
Following gene: 77459998
Centisome position: 66.34
GC content: 66.76
Gene sequence:
>1080_bases ATGACCGCCATCCACATCAAGTTTCCTGCCCTCACCCTCAAGGCCGGCCCCCGGGCCATGGCGCGCATTCGTGCCCAAGG CCTGAGCGCCGCTGACGTCGGCACCCTGCCCGGTGCTGCCGGCGGGCCAAAGGCGCTGGGGATTCAGGGGCTGGATCTGG CGCTGTTCGGCGAGTGGTTGCCGACGGCGCCGCGCGAGCGTTCGCTGATCGGTGCGTCGGTAGGCTCCTGGCGCTTCGCC AGCGCTTGTCTGCCGGACGCCGCCGAAGGCATACGCCGCCTCGGTCATCTGTACAACGAGCAGAACTTCAACAAAGGCGT GACCATCGGCGAGGTCAGCCGCAGCTCGCAGCGAATGCTTGATGACCTGCTCGACGGACGCGATGCCAGCCTTTTGACCA ACGCCCATTACCGCTTGAACATCATGGTGGTCAAAAGCCACGGCGGGCTGGCGGACGACCATCGCGGCCGGCTCGGGCTG GCGCTGGGCTCGGTGATCGCCGACAACCTGCGGGGCCGCGCGCGGCTGTCGCGGCACTTCGAACGGCTGATCATCCACGA CCCGCGCCTGGCACCGCCGGTACATGCGCTGCACGACTTCCCGTCGCGCTTCGTCGCCCTCGATGCCAGCAACCTGCGTC AGGCGCTGCTGGCGTCCGGCTCGATCCCGATGGTCATGGAAGGCGTGCGCGACCTGCCGGGCGCCGGTGCCGGCACGTTC CGCGACGGCGGTCTGCTGGACTATCACCTCGACCTGCCCTACAGCGGCGACGGCATCGTGCTGTATCCGCACTTCACCGA CCGGGTGATTCCGGGCTGGTTCGACAAGACTCTGCCGTGGCGCAAAGCTTCCGTCGAGCGCTTGCAGGACGTGCTATTAC TCGCGCCATCGAAGGAATACCTGGCGCGCCTGCCCTACGGCAAACTCCCCGACCGTAACGACTTCAAACGCTTCATGGGC GATGCGCCGAGCCGACAGAAATACTGGCGCGCGGCGATGGACGAGAGCCGACGGCTGGGCGACGAATTCCTCGAACTGAC TGCCAATGGTCGCCTCGCCGAGCGCTTGCTGACCCTTTAG
Upstream 100 bases:
>100_bases GCGAACTTAACTGAAACTGAATGGCCATCATTGGGCCTGCCCCTACTGAGCCCGGCAACATGTGCTTATAATCTTTCGCT TGCTAACGATCGAGACCGGT
Downstream 100 bases:
>100_bases TCAGCACAGCCGGGAACAAGCTGATAAACTCGCCGCCTGCCCGAATTCGCTGCGGCGAACGCCATCTGAACAGAGCTGAA ATCACTGTGGAAATCTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MTAIHIKFPALTLKAGPRAMARIRAQGLSAADVGTLPGAAGGPKALGIQGLDLALFGEWLPTAPRERSLIGASVGSWRFA SACLPDAAEGIRRLGHLYNEQNFNKGVTIGEVSRSSQRMLDDLLDGRDASLLTNAHYRLNIMVVKSHGGLADDHRGRLGL ALGSVIADNLRGRARLSRHFERLIIHDPRLAPPVHALHDFPSRFVALDASNLRQALLASGSIPMVMEGVRDLPGAGAGTF RDGGLLDYHLDLPYSGDGIVLYPHFTDRVIPGWFDKTLPWRKASVERLQDVLLLAPSKEYLARLPYGKLPDRNDFKRFMG DAPSRQKYWRAAMDESRRLGDEFLELTANGRLAERLLTL
Sequences:
>Translated_359_residues MTAIHIKFPALTLKAGPRAMARIRAQGLSAADVGTLPGAAGGPKALGIQGLDLALFGEWLPTAPRERSLIGASVGSWRFA SACLPDAAEGIRRLGHLYNEQNFNKGVTIGEVSRSSQRMLDDLLDGRDASLLTNAHYRLNIMVVKSHGGLADDHRGRLGL ALGSVIADNLRGRARLSRHFERLIIHDPRLAPPVHALHDFPSRFVALDASNLRQALLASGSIPMVMEGVRDLPGAGAGTF RDGGLLDYHLDLPYSGDGIVLYPHFTDRVIPGWFDKTLPWRKASVERLQDVLLLAPSKEYLARLPYGKLPDRNDFKRFMG DAPSRQKYWRAAMDESRRLGDEFLELTANGRLAERLLTL >Mature_358_residues TAIHIKFPALTLKAGPRAMARIRAQGLSAADVGTLPGAAGGPKALGIQGLDLALFGEWLPTAPRERSLIGASVGSWRFAS ACLPDAAEGIRRLGHLYNEQNFNKGVTIGEVSRSSQRMLDDLLDGRDASLLTNAHYRLNIMVVKSHGGLADDHRGRLGLA LGSVIADNLRGRARLSRHFERLIIHDPRLAPPVHALHDFPSRFVALDASNLRQALLASGSIPMVMEGVRDLPGAGAGTFR DGGLLDYHLDLPYSGDGIVLYPHFTDRVIPGWFDKTLPWRKASVERLQDVLLLAPSKEYLARLPYGKLPDRNDFKRFMGD APSRQKYWRAAMDESRRLGDEFLELTANGRLAERLLTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39403; Mature: 39272
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIHIKFPALTLKAGPRAMARIRAQGLSAADVGTLPGAAGGPKALGIQGLDLALFGEWL CCEEEEECCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC PTAPRERSLIGASVGSWRFASACLPDAAEGIRRLGHLYNEQNFNKGVTIGEVSRSSQRML CCCCCCCCHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHH DDLLDGRDASLLTNAHYRLNIMVVKSHGGLADDHRGRLGLALGSVIADNLRGRARLSRHF HHHHCCCCCCEEECCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ERLIIHDPRLAPPVHALHDFPSRFVALDASNLRQALLASGSIPMVMEGVRDLPGAGAGTF HHHHHCCCCCCCHHHHHHHCCHHEEEECHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC RDGGLLDYHLDLPYSGDGIVLYPHFTDRVIPGWFDKTLPWRKASVERLQDVLLLAPSKEY CCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCHHH LARLPYGKLPDRNDFKRFMGDAPSRQKYWRAAMDESRRLGDEFLELTANGRLAERLLTL HHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC >Mature Secondary Structure TAIHIKFPALTLKAGPRAMARIRAQGLSAADVGTLPGAAGGPKALGIQGLDLALFGEWL CEEEEECCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC PTAPRERSLIGASVGSWRFASACLPDAAEGIRRLGHLYNEQNFNKGVTIGEVSRSSQRML CCCCCCCCHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHH DDLLDGRDASLLTNAHYRLNIMVVKSHGGLADDHRGRLGLALGSVIADNLRGRARLSRHF HHHHCCCCCCEEECCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ERLIIHDPRLAPPVHALHDFPSRFVALDASNLRQALLASGSIPMVMEGVRDLPGAGAGTF HHHHHCCCCCCCHHHHHHHCCHHEEEECHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC RDGGLLDYHLDLPYSGDGIVLYPHFTDRVIPGWFDKTLPWRKASVERLQDVLLLAPSKEY CCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCHHH LARLPYGKLPDRNDFKRFMGDAPSRQKYWRAAMDESRRLGDEFLELTANGRLAERLLTL HHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA