| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is folD1 [H]
Identifier: 77459921
GI number: 77459921
Start: 4188961
End: 4189815
Strand: Direct
Name: folD1 [H]
Synonym: Pfl01_3699
Alternate gene names: 77459921
Gene position: 4188961-4189815 (Clockwise)
Preceding gene: 77459914
Following gene: 77459922
Centisome position: 65.06
GC content: 63.16
Gene sequence:
>855_bases ATGACTGCACAACTAATCGACGGCAAATCGATCGCCGCCAGCCTGCGCCAGCAGATCGCCCAACGGGTTGCCGAACGTCG CCAGCAAGGTCTGCGCACGCCAGGCCTCGCGGTGATCCTGGTCGGCAGCGATCCTGCCTCTCAGGTTTATGTCTCGCACA AGCGTAAAGACTGTGAAGAGGTCGGCTTCCTCTCTCAAGCGTACGACCTGCCTTCCGAAACCACTCAAGAAGCGCTGACC GATCTGATCGATCGACTGAACGACGACCCGGCAATCGACGGCGTTCTGCTTCAACTTCCTCTGCCAGAGCACCTGGACGC TTCCAAACTGCTGGAACGCATCCGCCCGGACAAGGACGTCGACGGTTTCCATCCTTATAACGTCGGCCGTCTGGCCCAGC GCATTCCATTGCTGCGCCCGTGCACCCCGAAGGGCATCATGACCCTGCTGGAAAGCACGGGCGCCGATCTGTACGGGATG GACGCCGTGGTCGTCGGCGCGTCCAACATCGTCGGTCGCCCGATGGCGATGGAACTGTTGCTGGCCGGTTGCACCGTGAC CGTCACCCACCGCTTCACCAAGGATCTGGCCGGCCATGTCGGTCGTGCCGACCTGGTGGTCGTGGCCGCCGGCAAGCCGG GCCTGGTCAAGGGCGAATGGATCAAGGAAGGCGCGATCGTGATCGACGTCGGCATCAACCGACAGGAAGACGGCAAACTG GTCGGTGACGTCGTGTACGAAACCGCCCTGCCCCGCGCCGGCTGGATCACTCCGGTGCCGGGTGGCGTCGGTCCGATGAC CCGTGCCTGCCTGCTGGAAAACACCCTCTACGCGGCAGAAACCCTGCACGCCTGA
Upstream 100 bases:
>100_bases GGGCTTAGGGGAATTTGCTGACCAAGCGCCTTTGCCCTCACCGTTTGACATGCGAGAATGCGTTCTCTTTTTTTCCCCTC TCGATGGTTAATCACGCGCA
Downstream 100 bases:
>100_bases GTCGCGTTTTCCGTACGCCGAGAACCCCGCCTTGTGCGGGGTTTTTCATGCCCTCGAAAAAACCTTTACCGTTCGCCGGA AACCCCTATTTTTACAGGGC
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTAQLIDGKSIAASLRQQIAQRVAERRQQGLRTPGLAVILVGSDPASQVYVSHKRKDCEEVGFLSQAYDLPSETTQEALT DLIDRLNDDPAIDGVLLQLPLPEHLDASKLLERIRPDKDVDGFHPYNVGRLAQRIPLLRPCTPKGIMTLLESTGADLYGM DAVVVGASNIVGRPMAMELLLAGCTVTVTHRFTKDLAGHVGRADLVVVAAGKPGLVKGEWIKEGAIVIDVGINRQEDGKL VGDVVYETALPRAGWITPVPGGVGPMTRACLLENTLYAAETLHA
Sequences:
>Translated_284_residues MTAQLIDGKSIAASLRQQIAQRVAERRQQGLRTPGLAVILVGSDPASQVYVSHKRKDCEEVGFLSQAYDLPSETTQEALT DLIDRLNDDPAIDGVLLQLPLPEHLDASKLLERIRPDKDVDGFHPYNVGRLAQRIPLLRPCTPKGIMTLLESTGADLYGM DAVVVGASNIVGRPMAMELLLAGCTVTVTHRFTKDLAGHVGRADLVVVAAGKPGLVKGEWIKEGAIVIDVGINRQEDGKL VGDVVYETALPRAGWITPVPGGVGPMTRACLLENTLYAAETLHA >Mature_283_residues TAQLIDGKSIAASLRQQIAQRVAERRQQGLRTPGLAVILVGSDPASQVYVSHKRKDCEEVGFLSQAYDLPSETTQEALTD LIDRLNDDPAIDGVLLQLPLPEHLDASKLLERIRPDKDVDGFHPYNVGRLAQRIPLLRPCTPKGIMTLLESTGADLYGMD AVVVGASNIVGRPMAMELLLAGCTVTVTHRFTKDLAGHVGRADLVVVAAGKPGLVKGEWIKEGAIVIDVGINRQEDGKLV GDVVYETALPRAGWITPVPGGVGPMTRACLLENTLYAAETLHA
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI222418558, Length=295, Percent_Identity=43.728813559322, Blast_Score=226, Evalue=2e-59, Organism=Homo sapiens, GI94721354, Length=295, Percent_Identity=44.7457627118644, Blast_Score=222, Evalue=4e-58, Organism=Homo sapiens, GI222136639, Length=290, Percent_Identity=43.1034482758621, Blast_Score=216, Evalue=2e-56, Organism=Homo sapiens, GI36796743, Length=198, Percent_Identity=28.7878787878788, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1786741, Length=283, Percent_Identity=67.4911660777385, Blast_Score=400, Evalue=1e-113, Organism=Caenorhabditis elegans, GI17568735, Length=292, Percent_Identity=40.4109589041096, Blast_Score=184, Evalue=5e-47, Organism=Saccharomyces cerevisiae, GI6321643, Length=299, Percent_Identity=42.809364548495, Blast_Score=229, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6319558, Length=286, Percent_Identity=43.7062937062937, Blast_Score=223, Evalue=3e-59, Organism=Saccharomyces cerevisiae, GI6322933, Length=311, Percent_Identity=27.6527331189711, Blast_Score=82, Evalue=8e-17, Organism=Drosophila melanogaster, GI17136818, Length=292, Percent_Identity=47.945205479452, Blast_Score=245, Evalue=2e-65, Organism=Drosophila melanogaster, GI17136816, Length=292, Percent_Identity=47.945205479452, Blast_Score=245, Evalue=3e-65, Organism=Drosophila melanogaster, GI62472483, Length=287, Percent_Identity=42.5087108013937, Blast_Score=205, Evalue=2e-53, Organism=Drosophila melanogaster, GI45551871, Length=287, Percent_Identity=42.5087108013937, Blast_Score=205, Evalue=2e-53, Organism=Drosophila melanogaster, GI24645718, Length=287, Percent_Identity=42.5087108013937, Blast_Score=205, Evalue=3e-53, Organism=Drosophila melanogaster, GI17137370, Length=287, Percent_Identity=42.5087108013937, Blast_Score=205, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 30508; Mature: 30376
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQLIDGKSIAASLRQQIAQRVAERRQQGLRTPGLAVILVGSDPASQVYVSHKRKDCEE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCHHH VGFLSQAYDLPSETTQEALTDLIDRLNDDPAIDGVLLQLPLPEHLDASKLLERIRPDKDV HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCC DGFHPYNVGRLAQRIPLLRPCTPKGIMTLLESTGADLYGMDAVVVGASNIVGRPMAMELL CCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEECCCEEEEECHHHCCCHHHHHHH LAGCTVTVTHRFTKDLAGHVGRADLVVVAAGKPGLVKGEWIKEGAIVIDVGINRQEDGKL HHCCEEEEHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEECCCCEEEEECCCCCCCCCH VGDVVYETALPRAGWITPVPGGVGPMTRACLLENTLYAAETLHA HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TAQLIDGKSIAASLRQQIAQRVAERRQQGLRTPGLAVILVGSDPASQVYVSHKRKDCEE CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCHHH VGFLSQAYDLPSETTQEALTDLIDRLNDDPAIDGVLLQLPLPEHLDASKLLERIRPDKDV HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCC DGFHPYNVGRLAQRIPLLRPCTPKGIMTLLESTGADLYGMDAVVVGASNIVGRPMAMELL CCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEECCCEEEEECHHHCCCHHHHHHH LAGCTVTVTHRFTKDLAGHVGRADLVVVAAGKPGLVKGEWIKEGAIVIDVGINRQEDGKL HHCCEEEEHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEECCCCEEEEECCCCCCCCCH VGDVVYETALPRAGWITPVPGGVGPMTRACLLENTLYAAETLHA HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA