Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77459912
Identifier: 77459912
GI number: 77459912
Start: 4176049
End: 4176906
Strand: Reverse
Name: 77459912
Synonym: Pfl01_3690
Alternate gene names: NA
Gene position: 4176906-4176049 (Counterclockwise)
Preceding gene: 77459913
Following gene: 77459909
Centisome position: 64.87
GC content: 64.1
Gene sequence:
>858_bases ATGTTGAATTCTATTCCCGTGCGTTTCATCGGGTTGGCGTTGTTGCTGACCGCCGCTGCCGGCTGCTCCAAGGACAAGCC TATCTACGAGCATGAGAATTTCGACGACTCCGGCACCTTTTCGCGCAATTACCCGGTGACCGACACCGCCAGTTGCGAAG CGGCCCGCCGAGCGTTACTCAGCCAGGGCTACATCATTACCAGCAATGACCCGAAACTGGTCAGCGGGCACAAGAGCTTC CAGCAGACCGGCGAAACCCACCTGGAGATCAGCTTCAACGTGGTGTGCGCCGATGATGGCAGCGCCGGCCATCACGCCAC CGTGTTCGCCAACGCCTTGCAGGACCGCTACGCGCTGAAGAAGACCAACAACTCGGCCAGTCTGGGTGTCGGCGTATTGG GTTCGGTGTCGATGCCGATCGGCTCGTCTGACGATTCGATGGTGAAAGTGGCCAGTGAAACCGTGTCGTCGCAGAAGTTC TACGAGCGTTTCTTCACCCTGGTCGAGTTGTTCCTGCCGGCCGACGCGAAGAAAGCCGCGCATATCACCGAAAAGCCCAA GACTGACCTGGGTGTGCCGGAAGCCAAGGCAACGCCGGCTCCTCTGGCTCCAGCCCCAGTGGCTGAACCGACCCCAGCGC CGGCCGCCGAGCCCGCTGCGGCACCGGCGCCAGCGCCTGCAGAAGCGGCCCCGGTCAGTTCCGAGCCGGTAGCACCGCCT GCCGAAGCCGCGCCGATCACCCCGGCACCGGTTGCCGAGCCTGCGCCCGCGACGGAAACCATCACGCCGCCGGCCAACCC GACGGACATGCCGCCACCCTCCGAGCCGATTCCGGCCATGCCTGCCTCCGGGCAGTAA
Upstream 100 bases:
>100_bases CCGGTAGAGTTGTAACTGTTTTAAGACACTAATCCATACGCCGCGGGGCAGCGATCTGTTGCACAATACGCCCCGGACCG TTTTCCCCTCAGGATGTTTA
Downstream 100 bases:
>100_bases ACTTCACGCCACGCCTCCGGCTCCTGTCGGACGCGTGGCGTTTTGTTGTCTCCCTTGAGCTTCTTCCTGCCAGCCCCGTC GAAAAATATCCCGCGATAAA
Product: putative lipoprotein
Products: NA
Alternate protein names: Lipoprotein Transmembrane; Lipoprotein Protein; Large Tegument Domain-Containing Protein
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MLNSIPVRFIGLALLLTAAAGCSKDKPIYEHENFDDSGTFSRNYPVTDTASCEAARRALLSQGYIITSNDPKLVSGHKSF QQTGETHLEISFNVVCADDGSAGHHATVFANALQDRYALKKTNNSASLGVGVLGSVSMPIGSSDDSMVKVASETVSSQKF YERFFTLVELFLPADAKKAAHITEKPKTDLGVPEAKATPAPLAPAPVAEPTPAPAAEPAAAPAPAPAEAAPVSSEPVAPP AEAAPITPAPVAEPAPATETITPPANPTDMPPPSEPIPAMPASGQ
Sequences:
>Translated_285_residues MLNSIPVRFIGLALLLTAAAGCSKDKPIYEHENFDDSGTFSRNYPVTDTASCEAARRALLSQGYIITSNDPKLVSGHKSF QQTGETHLEISFNVVCADDGSAGHHATVFANALQDRYALKKTNNSASLGVGVLGSVSMPIGSSDDSMVKVASETVSSQKF YERFFTLVELFLPADAKKAAHITEKPKTDLGVPEAKATPAPLAPAPVAEPTPAPAAEPAAAPAPAPAEAAPVSSEPVAPP AEAAPITPAPVAEPAPATETITPPANPTDMPPPSEPIPAMPASGQ >Mature_285_residues MLNSIPVRFIGLALLLTAAAGCSKDKPIYEHENFDDSGTFSRNYPVTDTASCEAARRALLSQGYIITSNDPKLVSGHKSF QQTGETHLEISFNVVCADDGSAGHHATVFANALQDRYALKKTNNSASLGVGVLGSVSMPIGSSDDSMVKVASETVSSQKF YERFFTLVELFLPADAKKAAHITEKPKTDLGVPEAKATPAPLAPAPVAEPTPAPAAEPAAAPAPAPAEAAPVSSEPVAPP AEAAPITPAPVAEPAPATETITPPANPTDMPPPSEPIPAMPASGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29382; Mature: 29382
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNSIPVRFIGLALLLTAAAGCSKDKPIYEHENFDDSGTFSRNYPVTDTASCEAARRALL CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH SQGYIITSNDPKLVSGHKSFQQTGETHLEISFNVVCADDGSAGHHATVFANALQDRYALK HCCEEEECCCCCEECCCHHHHHCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH KTNNSASLGVGVLGSVSMPIGSSDDSMVKVASETVSSQKFYERFFTLVELFLPADAKKAA HCCCCCCCCEEEECEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH HITEKPKTDLGVPEAKATPAPLAPAPVAEPTPAPAAEPAAAPAPAPAEAAPVSSEPVAPP HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AEAAPITPAPVAEPAPATETITPPANPTDMPPPSEPIPAMPASGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLNSIPVRFIGLALLLTAAAGCSKDKPIYEHENFDDSGTFSRNYPVTDTASCEAARRALL CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH SQGYIITSNDPKLVSGHKSFQQTGETHLEISFNVVCADDGSAGHHATVFANALQDRYALK HCCEEEECCCCCEECCCHHHHHCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH KTNNSASLGVGVLGSVSMPIGSSDDSMVKVASETVSSQKFYERFFTLVELFLPADAKKAA HCCCCCCCCEEEECEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH HITEKPKTDLGVPEAKATPAPLAPAPVAEPTPAPAAEPAAAPAPAPAEAAPVSSEPVAPP HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AEAAPITPAPVAEPAPATETITPPANPTDMPPPSEPIPAMPASGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA