Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is fusA [H]
Identifier: 77459866
GI number: 77459866
Start: 4121141
End: 4122610
Strand: Reverse
Name: fusA [H]
Synonym: Pfl01_3644
Alternate gene names: 77459866
Gene position: 4122610-4121141 (Counterclockwise)
Preceding gene: 77459867
Following gene: 77459865
Centisome position: 64.03
GC content: 64.22
Gene sequence:
>1470_bases ATGAGCGGTAAAATCTTGCGCAGCAGCCTGACACTGGTGCTGTCGGCGATGATCCTCGCCGGTTGCGCCAACTACAGTGG CCTCGATACCCAGGGCGCCAGCCTCGATGCGAAAACCCTGCAGACCGGGCAATCGCTCAACGGCGTCATCCTGTCCCAGG CCGCGTGGCCGAAGAGCGACTGGTGGACCAGCCTCGGCGATCCGCAGCTCGACGGTCTGATCCGCGAAGCGCTGAAAGAC AGCCCGGACATGCAGATCGCCGACGCCCGCGCCCATCAGGCCAGCGCCGCCGCGTACGCCGCCGATGCCGAGCGCTATCC GACCCTCGACGCCAGCGCCGGCATCAGCCGTTCGCGTCTGGCCCGGGATCAGGATCCGTTGGGGCAGGGTGGGGCTTACT CCACCGTGCGCAACATCAGCGCCGGCTTCAATTACAACTTCGACCTGTGGGGCGGTCAGCGTGACGCCTGGGAAGCCGCA CTCGGTCAGGCCCGCGCCGCCGAGGTCGACCGTCAGGCCGCACAGTTGACCCTGGCTGCTGACGTGGCCCGGGCCTACAG CGATCTGGGTCAGGCGCACATCGTTTATGACCTGGCCAACGAAGACCTCAAGCGCACCAAACAGATGCTCGACCTGAGCC AGCGCCGCCTGAGTTCCGGGATCGACAGCCAGTATCAGTTCCAGCAGACCCAAAGTCTGGAAGCCAGCTCCGAAGCCAGC CTGATCGACGCTGAAAAGCGCCTGAACAGCGCGAAAATCGCCCTGGCCGTATTGCTCGGCAAAGGCCCGGATCGCGGTAA CGAAATCGCTCGGCCGAAAGTCCTGCAAGCCAGCGCTGTCGCACTGCCATCGGTGCTTCCCGCCGAACTGCTGGGCCGTC GTCCGGATCTGGTCGCCGCGCGCTGGCGTGTCGAGGCGGCGAGCAAGGACATCGACTCGGCCAAGACCCGCTTCTATCCC AACCTGAACCTGTCGGCTTCCGCTGGTGCCGAATCCTTGTTGGGGGACGCGATGTTCGGTTCCGCCAGTCGCTTCTTCAA CATTGCCCCGACGATTTCGGTGCCGATCTTCGATGGCGGACGCCTGCGCGCCAACCTCGATGCCCGCGACGCCGATTACG ACCTCGCCGTGGCGCAGTACAACAAAAGTCTGGTGAAAGCCCTGGGCGATGTCAGCGACACCATTAACCAGCTGCGTGAC ATCGGCCGGCAGATCGGCGCCCAGCAGCACGCAACCGAGATTGCCCAGGATTCTTACAACACCGTCGTTCAGCGTTACGG TTCCGGCATCGGCAACTACCTGGACGTGCTCAGCATCGAGCAGCAATTGCTGCAGGCCCAGCGTCAGCTGGCCAACCTGA ATGCCGAGCAGATCGACCTGTCGATTCAACTGATGCAAGCGCTGGGCGGCGGCTTCCAGGGGCAAACCCTGACCGCAGCC AACGCCACCCCAGCCACGCCGCACAACTAA
Upstream 100 bases:
>100_bases GCCGTGACCCCGGACGAGTTGAAAACCCTGGAATACATCCTCAAGAAAATTTTGCTGGCAGCCGGTGACCCCATCACCAT CCAGCGGTTAGGTGAACACA
Downstream 100 bases:
>100_bases TTCAAGGTACTTGTCATGGCCACTGCCGAAAACACACAAGCTCAAGACAACGCCCAGGACACTGGCAATCCGCGCAAACG CAAGGTGATGCTGCTGGTGC
Product: RND efflux system outer membrane lipoprotein NodT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MSGKILRSSLTLVLSAMILAGCANYSGLDTQGASLDAKTLQTGQSLNGVILSQAAWPKSDWWTSLGDPQLDGLIREALKD SPDMQIADARAHQASAAAYAADAERYPTLDASAGISRSRLARDQDPLGQGGAYSTVRNISAGFNYNFDLWGGQRDAWEAA LGQARAAEVDRQAAQLTLAADVARAYSDLGQAHIVYDLANEDLKRTKQMLDLSQRRLSSGIDSQYQFQQTQSLEASSEAS LIDAEKRLNSAKIALAVLLGKGPDRGNEIARPKVLQASAVALPSVLPAELLGRRPDLVAARWRVEAASKDIDSAKTRFYP NLNLSASAGAESLLGDAMFGSASRFFNIAPTISVPIFDGGRLRANLDARDADYDLAVAQYNKSLVKALGDVSDTINQLRD IGRQIGAQQHATEIAQDSYNTVVQRYGSGIGNYLDVLSIEQQLLQAQRQLANLNAEQIDLSIQLMQALGGGFQGQTLTAA NATPATPHN
Sequences:
>Translated_489_residues MSGKILRSSLTLVLSAMILAGCANYSGLDTQGASLDAKTLQTGQSLNGVILSQAAWPKSDWWTSLGDPQLDGLIREALKD SPDMQIADARAHQASAAAYAADAERYPTLDASAGISRSRLARDQDPLGQGGAYSTVRNISAGFNYNFDLWGGQRDAWEAA LGQARAAEVDRQAAQLTLAADVARAYSDLGQAHIVYDLANEDLKRTKQMLDLSQRRLSSGIDSQYQFQQTQSLEASSEAS LIDAEKRLNSAKIALAVLLGKGPDRGNEIARPKVLQASAVALPSVLPAELLGRRPDLVAARWRVEAASKDIDSAKTRFYP NLNLSASAGAESLLGDAMFGSASRFFNIAPTISVPIFDGGRLRANLDARDADYDLAVAQYNKSLVKALGDVSDTINQLRD IGRQIGAQQHATEIAQDSYNTVVQRYGSGIGNYLDVLSIEQQLLQAQRQLANLNAEQIDLSIQLMQALGGGFQGQTLTAA NATPATPHN >Mature_488_residues SGKILRSSLTLVLSAMILAGCANYSGLDTQGASLDAKTLQTGQSLNGVILSQAAWPKSDWWTSLGDPQLDGLIREALKDS PDMQIADARAHQASAAAYAADAERYPTLDASAGISRSRLARDQDPLGQGGAYSTVRNISAGFNYNFDLWGGQRDAWEAAL GQARAAEVDRQAAQLTLAADVARAYSDLGQAHIVYDLANEDLKRTKQMLDLSQRRLSSGIDSQYQFQQTQSLEASSEASL IDAEKRLNSAKIALAVLLGKGPDRGNEIARPKVLQASAVALPSVLPAELLGRRPDLVAARWRVEAASKDIDSAKTRFYPN LNLSASAGAESLLGDAMFGSASRFFNIAPTISVPIFDGGRLRANLDARDADYDLAVAQYNKSLVKALGDVSDTINQLRDI GRQIGAQQHATEIAQDSYNTVVQRYGSGIGNYLDVLSIEQQLLQAQRQLANLNAEQIDLSIQLMQALGGGFQGQTLTAAN ATPATPHN
Specific function: Involved in the resistance (detoxification) of the fungal toxin fusaric acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
Organism=Escherichia coli, GI2367348, Length=475, Percent_Identity=29.6842105263158, Blast_Score=194, Evalue=9e-51, Organism=Escherichia coli, GI1786785, Length=460, Percent_Identity=28.4782608695652, Blast_Score=157, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 - InterPro: IPR010131 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 52320; Mature: 52189
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKILRSSLTLVLSAMILAGCANYSGLDTQGASLDAKTLQTGQSLNGVILSQAAWPKSD CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCEEEECCCCCCCC WWTSLGDPQLDGLIREALKDSPDMQIADARAHQASAAAYAADAERYPTLDASAGISRSRL CCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCHHHH ARDQDPLGQGGAYSTVRNISAGFNYNFDLWGGQRDAWEAALGQARAAEVDRQAAQLTLAA CCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DVARAYSDLGQAHIVYDLANEDLKRTKQMLDLSQRRLSSGIDSQYQFQQTQSLEASSEAS HHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHH LIDAEKRLNSAKIALAVLLGKGPDRGNEIARPKVLQASAVALPSVLPAELLGRRPDLVAA HHHHHHHHCHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCHHHH RWRVEAASKDIDSAKTRFYPNLNLSASAGAESLLGDAMFGSASRFFNIAPTISVPIFDGG HHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHEEECCEEEEEEECCC RLRANLDARDADYDLAVAQYNKSLVKALGDVSDTINQLRDIGRQIGAQQHATEIAQDSYN EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH TVVQRYGSGIGNYLDVLSIEQQLLQAQRQLANLNAEQIDLSIQLMQALGGGFQGQTLTAA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEC NATPATPHN CCCCCCCCC >Mature Secondary Structure SGKILRSSLTLVLSAMILAGCANYSGLDTQGASLDAKTLQTGQSLNGVILSQAAWPKSD CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCEEEECCCCCCCC WWTSLGDPQLDGLIREALKDSPDMQIADARAHQASAAAYAADAERYPTLDASAGISRSRL CCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCHHHH ARDQDPLGQGGAYSTVRNISAGFNYNFDLWGGQRDAWEAALGQARAAEVDRQAAQLTLAA CCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DVARAYSDLGQAHIVYDLANEDLKRTKQMLDLSQRRLSSGIDSQYQFQQTQSLEASSEAS HHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHH LIDAEKRLNSAKIALAVLLGKGPDRGNEIARPKVLQASAVALPSVLPAELLGRRPDLVAA HHHHHHHHCHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCHHHH RWRVEAASKDIDSAKTRFYPNLNLSASAGAESLLGDAMFGSASRFFNIAPTISVPIFDGG HHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHEEECCEEEEEEECCC RLRANLDARDADYDLAVAQYNKSLVKALGDVSDTINQLRDIGRQIGAQQHATEIAQDSYN EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH TVVQRYGSGIGNYLDVLSIEQQLLQAQRQLANLNAEQIDLSIQLMQALGGGFQGQTLTAA HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEC NATPATPHN CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1370369 [H]