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The map label for this gene is yjgH [H]

Identifier: 77458961

GI number: 77458961

Start: 3153871

End: 3154287

Strand: Direct

Name: yjgH [H]

Synonym: Pfl01_2736

Alternate gene names: 77458961

Gene position: 3153871-3154287 (Clockwise)

Preceding gene: 77458960

Following gene: 77458962

Centisome position: 48.99

GC content: 59.47

Gene sequence:

>417_bases
ATGAGCACTCAAGACCTGCAGCGTCAGTCCTTCAACCCTGGTCACACCCAGGCGATCTACGACAACTTCCACTTTTCCCA
GGCTACACGCGTCGGCAACATGATCTGGGTGTCCGGTCAGGTCGGTATCGACGAGGCCATGGTTCCGGCCGACGGCATCC
AGGCGCAATCCCATCTGGCATTTCAATCCTTGCGGACCATCCTCGAAGCTGCGGGCGCAAGCCTGGCCGACGTGGTCGAG
CTGATGACGTTTCATACCGACCTGCAGGCCGAAGTGCACGCCTTTGGACAGGTAAAGGACGAATATTTCCCTGAACGTTA
TCCAGCCTGGACCGCTGTCGGCATTTCCCAACTGGCAATGCCGGGCTTGCGCGTGGAAGTCCGGGCCGTCGCGGTGATTG
GCAGCGGTCGAATCTGA

Upstream 100 bases:

>100_bases
CAGCAAGGCGTGCTGTTCACTGAAGAGCTGTCGACGCTGAAAGCGGGAGACGCCTTCCGCCACCCAACGTTCCGCCAATT
AATATAAGAGGAGCACCGCC

Downstream 100 bases:

>100_bases
ACGATTGCATGATCGCGACGTGCCAAGCCAAAATGGCGTTCGCAGCCACTGTCGACTCAACGCCTTCAACCAACGGAATC
ACTTTCTCTCATGCATGATG

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSTQDLQRQSFNPGHTQAIYDNFHFSQATRVGNMIWVSGQVGIDEAMVPADGIQAQSHLAFQSLRTILEAAGASLADVVE
LMTFHTDLQAEVHAFGQVKDEYFPERYPAWTAVGISQLAMPGLRVEVRAVAVIGSGRI

Sequences:

>Translated_138_residues
MSTQDLQRQSFNPGHTQAIYDNFHFSQATRVGNMIWVSGQVGIDEAMVPADGIQAQSHLAFQSLRTILEAAGASLADVVE
LMTFHTDLQAEVHAFGQVKDEYFPERYPAWTAVGISQLAMPGLRVEVRAVAVIGSGRI
>Mature_137_residues
STQDLQRQSFNPGHTQAIYDNFHFSQATRVGNMIWVSGQVGIDEAMVPADGIQAQSHLAFQSLRTILEAAGASLADVVEL
MTFHTDLQAEVHAFGQVKDEYFPERYPAWTAVGISQLAMPGLRVEVRAVAVIGSGRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI1790696, Length=129, Percent_Identity=36.4341085271318, Blast_Score=87, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71982075, Length=111, Percent_Identity=36.036036036036, Blast_Score=67, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI25148896, Length=111, Percent_Identity=36.036036036036, Blast_Score=66, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71982068, Length=111, Percent_Identity=36.036036036036, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 15088; Mature: 14957

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTQDLQRQSFNPGHTQAIYDNFHFSQATRVGNMIWVSGQVGIDEAMVPADGIQAQSHLA
CCCCHHHHHCCCCCCCHHHHCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHH
FQSLRTILEAAGASLADVVELMTFHTDLQAEVHAFGQVKDEYFPERYPAWTAVGISQLAM
HHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
PGLRVEVRAVAVIGSGRI
CCCEEEEEEEEEECCCCC
>Mature Secondary Structure 
STQDLQRQSFNPGHTQAIYDNFHFSQATRVGNMIWVSGQVGIDEAMVPADGIQAQSHLA
CCCHHHHHCCCCCCCHHHHCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHH
FQSLRTILEAAGASLADVVELMTFHTDLQAEVHAFGQVKDEYFPERYPAWTAVGISQLAM
HHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
PGLRVEVRAVAVIGSGRI
CCCEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]