Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is envR [C]

Identifier: 77458962

GI number: 77458962

Start: 3154378

End: 3155040

Strand: Direct

Name: envR [C]

Synonym: Pfl01_2737

Alternate gene names: 77458962

Gene position: 3154378-3155040 (Clockwise)

Preceding gene: 77458961

Following gene: 77458963

Centisome position: 48.99

GC content: 57.62

Gene sequence:

>663_bases
ATGCATGATGCTCAAGCGCCTTCCACGGATAGTCAGCACTCCATTGACAGTGATTCCGCGCCCGCTCCACGTCGCGGTCG
TCCGGTAGGTAATCGTCTGGAAAAACGCGGTGAACTGTTGACCGCAGCCATCGAAGTCATTGCCCAGGAAGGTTATGCCG
GGACGTCTCTGCGCAAGGTCGCCAGTCATGCCGGGTGCACCACGGGGGCCGTGACCTATTACTTTGCCAACAAAGAAGAA
ATGATCACGGCGGCGGCGCAGAGTCTGTTCGACGAGTTCGACCATTTGCTGGATGCCGGTCAGGAAAAAGTCGATGTCAG
GGCAATGATCGAGCAGTGGTTGAACCTGACTCAAGCCAACGACTCGGCGCGCTGGCTGGCCTTGTTTCAGATGCTTGCCC
ACGCTCGGCACGAACCGGTATTTGCCGACGTGATCCAGAAACGTTATTCGCGCTTCCGCGAGGATCTCGCCAGCATTCTG
CGCAAGGGACAAAGCCAAGGCATCATCCGCAAGGACATTGCTGCCGATCTGCTTGCCGATCAGCTCAGCGCGCTGAGTGA
CGGCTGGATGATGATGCTGCCAATCGAGCCAGAGCGATTTGAAGCCAAACGCAGCAAGGCCTTGATGGATGCGGTCATCA
CGCTGATCAGCCCCGCTCGCTAA

Upstream 100 bases:

>100_bases
TCGAATCTGAACGATTGCATGATCGCGACGTGCCAAGCCAAAATGGCGTTCGCAGCCACTGTCGACTCAACGCCTTCAAC
CAACGGAATCACTTTCTCTC

Downstream 100 bases:

>100_bases
ACCCTGCCCTCCAGCATCAACAAGGTTCGCTTCATTTGCGCAGCGAACCCTGCTTGGTCACGCCCGCGTTACGCTCATAC
CCACGGTTAACCGACATCGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MHDAQAPSTDSQHSIDSDSAPAPRRGRPVGNRLEKRGELLTAAIEVIAQEGYAGTSLRKVASHAGCTTGAVTYYFANKEE
MITAAAQSLFDEFDHLLDAGQEKVDVRAMIEQWLNLTQANDSARWLALFQMLAHARHEPVFADVIQKRYSRFREDLASIL
RKGQSQGIIRKDIAADLLADQLSALSDGWMMMLPIEPERFEAKRSKALMDAVITLISPAR

Sequences:

>Translated_220_residues
MHDAQAPSTDSQHSIDSDSAPAPRRGRPVGNRLEKRGELLTAAIEVIAQEGYAGTSLRKVASHAGCTTGAVTYYFANKEE
MITAAAQSLFDEFDHLLDAGQEKVDVRAMIEQWLNLTQANDSARWLALFQMLAHARHEPVFADVIQKRYSRFREDLASIL
RKGQSQGIIRKDIAADLLADQLSALSDGWMMMLPIEPERFEAKRSKALMDAVITLISPAR
>Mature_220_residues
MHDAQAPSTDSQHSIDSDSAPAPRRGRPVGNRLEKRGELLTAAIEVIAQEGYAGTSLRKVASHAGCTTGAVTYYFANKEE
MITAAAQSLFDEFDHLLDAGQEKVDVRAMIEQWLNLTQANDSARWLALFQMLAHARHEPVFADVIQKRYSRFREDLASIL
RKGQSQGIIRKDIAADLLADQLSALSDGWMMMLPIEPERFEAKRSKALMDAVITLISPAR

Specific function: Potential Regulator Protein For The Acref/Envcd Genes. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24409; Mature: 24409

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDAQAPSTDSQHSIDSDSAPAPRRGRPVGNRLEKRGELLTAAIEVIAQEGYAGTSLRKV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ASHAGCTTGAVTYYFANKEEMITAAAQSLFDEFDHLLDAGQEKVDVRAMIEQWLNLTQAN
HHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
DSARWLALFQMLAHARHEPVFADVIQKRYSRFREDLASILRKGQSQGIIRKDIAADLLAD
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
QLSALSDGWMMMLPIEPERFEAKRSKALMDAVITLISPAR
HHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHDAQAPSTDSQHSIDSDSAPAPRRGRPVGNRLEKRGELLTAAIEVIAQEGYAGTSLRKV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ASHAGCTTGAVTYYFANKEEMITAAAQSLFDEFDHLLDAGQEKVDVRAMIEQWLNLTQAN
HHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
DSARWLALFQMLAHARHEPVFADVIQKRYSRFREDLASILRKGQSQGIIRKDIAADLLAD
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
QLSALSDGWMMMLPIEPERFEAKRSKALMDAVITLISPAR
HHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA