| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is envR [C]
Identifier: 77458962
GI number: 77458962
Start: 3154378
End: 3155040
Strand: Direct
Name: envR [C]
Synonym: Pfl01_2737
Alternate gene names: 77458962
Gene position: 3154378-3155040 (Clockwise)
Preceding gene: 77458961
Following gene: 77458963
Centisome position: 48.99
GC content: 57.62
Gene sequence:
>663_bases ATGCATGATGCTCAAGCGCCTTCCACGGATAGTCAGCACTCCATTGACAGTGATTCCGCGCCCGCTCCACGTCGCGGTCG TCCGGTAGGTAATCGTCTGGAAAAACGCGGTGAACTGTTGACCGCAGCCATCGAAGTCATTGCCCAGGAAGGTTATGCCG GGACGTCTCTGCGCAAGGTCGCCAGTCATGCCGGGTGCACCACGGGGGCCGTGACCTATTACTTTGCCAACAAAGAAGAA ATGATCACGGCGGCGGCGCAGAGTCTGTTCGACGAGTTCGACCATTTGCTGGATGCCGGTCAGGAAAAAGTCGATGTCAG GGCAATGATCGAGCAGTGGTTGAACCTGACTCAAGCCAACGACTCGGCGCGCTGGCTGGCCTTGTTTCAGATGCTTGCCC ACGCTCGGCACGAACCGGTATTTGCCGACGTGATCCAGAAACGTTATTCGCGCTTCCGCGAGGATCTCGCCAGCATTCTG CGCAAGGGACAAAGCCAAGGCATCATCCGCAAGGACATTGCTGCCGATCTGCTTGCCGATCAGCTCAGCGCGCTGAGTGA CGGCTGGATGATGATGCTGCCAATCGAGCCAGAGCGATTTGAAGCCAAACGCAGCAAGGCCTTGATGGATGCGGTCATCA CGCTGATCAGCCCCGCTCGCTAA
Upstream 100 bases:
>100_bases TCGAATCTGAACGATTGCATGATCGCGACGTGCCAAGCCAAAATGGCGTTCGCAGCCACTGTCGACTCAACGCCTTCAAC CAACGGAATCACTTTCTCTC
Downstream 100 bases:
>100_bases ACCCTGCCCTCCAGCATCAACAAGGTTCGCTTCATTTGCGCAGCGAACCCTGCTTGGTCACGCCCGCGTTACGCTCATAC CCACGGTTAACCGACATCGC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: TetR/AcrR Family Transcriptional Regulator
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MHDAQAPSTDSQHSIDSDSAPAPRRGRPVGNRLEKRGELLTAAIEVIAQEGYAGTSLRKVASHAGCTTGAVTYYFANKEE MITAAAQSLFDEFDHLLDAGQEKVDVRAMIEQWLNLTQANDSARWLALFQMLAHARHEPVFADVIQKRYSRFREDLASIL RKGQSQGIIRKDIAADLLADQLSALSDGWMMMLPIEPERFEAKRSKALMDAVITLISPAR
Sequences:
>Translated_220_residues MHDAQAPSTDSQHSIDSDSAPAPRRGRPVGNRLEKRGELLTAAIEVIAQEGYAGTSLRKVASHAGCTTGAVTYYFANKEE MITAAAQSLFDEFDHLLDAGQEKVDVRAMIEQWLNLTQANDSARWLALFQMLAHARHEPVFADVIQKRYSRFREDLASIL RKGQSQGIIRKDIAADLLADQLSALSDGWMMMLPIEPERFEAKRSKALMDAVITLISPAR >Mature_220_residues MHDAQAPSTDSQHSIDSDSAPAPRRGRPVGNRLEKRGELLTAAIEVIAQEGYAGTSLRKVASHAGCTTGAVTYYFANKEE MITAAAQSLFDEFDHLLDAGQEKVDVRAMIEQWLNLTQANDSARWLALFQMLAHARHEPVFADVIQKRYSRFREDLASIL RKGQSQGIIRKDIAADLLADQLSALSDGWMMMLPIEPERFEAKRSKALMDAVITLISPAR
Specific function: Potential Regulator Protein For The Acref/Envcd Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24409; Mature: 24409
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDAQAPSTDSQHSIDSDSAPAPRRGRPVGNRLEKRGELLTAAIEVIAQEGYAGTSLRKV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ASHAGCTTGAVTYYFANKEEMITAAAQSLFDEFDHLLDAGQEKVDVRAMIEQWLNLTQAN HHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC DSARWLALFQMLAHARHEPVFADVIQKRYSRFREDLASILRKGQSQGIIRKDIAADLLAD CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH QLSALSDGWMMMLPIEPERFEAKRSKALMDAVITLISPAR HHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHDAQAPSTDSQHSIDSDSAPAPRRGRPVGNRLEKRGELLTAAIEVIAQEGYAGTSLRKV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ASHAGCTTGAVTYYFANKEEMITAAAQSLFDEFDHLLDAGQEKVDVRAMIEQWLNLTQAN HHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC DSARWLALFQMLAHARHEPVFADVIQKRYSRFREDLASILRKGQSQGIIRKDIAADLLAD CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH QLSALSDGWMMMLPIEPERFEAKRSKALMDAVITLISPAR HHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA