Click here to switch to the map view.

The map label for this gene is 77458960

Identifier: 77458960

GI number: 77458960

Start: 3153024

End: 3153857

Strand: Direct

Name: 77458960

Synonym: Pfl01_2735

Alternate gene names: NA

Gene position: 3153024-3153857 (Clockwise)

Preceding gene: 77458957

Following gene: 77458961

Centisome position: 48.97

GC content: 57.19

Gene sequence:

>834_bases
ATGCAACTCTCTGTGCGAAAGGCGTTCCTGGAAGACGGGGCCGTCTTGATCAAAGGTTTTCTGAGCAAAGATCAATTGGC
CGAGTGCCGTGCAGCCTACGACTGGGCTGTTGAGAATCATGGCCCTCATGCGACTCGAATGTTCGACGGAACGGAGCAAC
AGTCGCACGTCGACAACGCCAATCCCGTTGCAAAGGCCCGTCTCGAAGAACTGGTGGCTTCCCTACCCTTTGGCGAGCTG
TTTGCGCAGCTCTGGGGTTCGGAGAATGTGTGGTACTTCGCCGAAGAAGTGTTTCTCAAAGCAGGTGGACGCGGTTCTCG
CACGCTTTGGCATCAGGACACGTCTTATCTGCCTTGGGCCGGAAACCATTGGGCGAATGCCTGGATCAGCTTTGAATCAG
TGCCGAAGAAAAACGCTTTGGAAATCGTTCGAGGTTCGCACAAAGGACCACGCTACGACGGCACCACGTTTCGCGATCCG
AATGATCCGACTCAACCGCTGCATGGCGGCGATGCATTGCCACGCCTGCCGGACATCGAGGCTTTGCGGCAAAACGATCC
TGAGGCATTCGAGATCATTTCGTGGGCCACCGAGCCTGGCGATATCCTCCTGCTGCATCCGGGTTCGCTGCATGGCGGCG
CTCCGGTGGATGAAGCCTTCCCGGACCGTCACACCTTCGTTTTCCGTTTCTTTGGCGACGACGCCACCTTCCATCCCTTG
CCAGAACACAGCGCCGGCGGTTATCCGCAGCAAGGCGTGCTGTTCACTGAAGAGCTGTCGACGCTGAAAGCGGGAGACGC
CTTCCGCCACCCAACGTTCCGCCAATTAATATAA

Upstream 100 bases:

>100_bases
CCATTGATGATAACATTATTAAGATAACGACTGTTGTGTTTAATCTTATCGCCTGCTAGCATCGAAATCGCCAAGTGGCA
TTTTCGAGGAGAAAGCTCTC

Downstream 100 bases:

>100_bases
GAGGAGCACCGCCATGAGCACTCAAGACCTGCAGCGTCAGTCCTTCAACCCTGGTCACACCCAGGCGATCTACGACAACT
TCCACTTTTCCCAGGCTACA

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: Phytanoyl-CoA Dioxygenase Family Protein; Dioxygenase; Phytanoyl-CoA Dioxygenase Protein; Phytanoyl-CoA Dioxygenase Superfamily

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MQLSVRKAFLEDGAVLIKGFLSKDQLAECRAAYDWAVENHGPHATRMFDGTEQQSHVDNANPVAKARLEELVASLPFGEL
FAQLWGSENVWYFAEEVFLKAGGRGSRTLWHQDTSYLPWAGNHWANAWISFESVPKKNALEIVRGSHKGPRYDGTTFRDP
NDPTQPLHGGDALPRLPDIEALRQNDPEAFEIISWATEPGDILLLHPGSLHGGAPVDEAFPDRHTFVFRFFGDDATFHPL
PEHSAGGYPQQGVLFTEELSTLKAGDAFRHPTFRQLI

Sequences:

>Translated_277_residues
MQLSVRKAFLEDGAVLIKGFLSKDQLAECRAAYDWAVENHGPHATRMFDGTEQQSHVDNANPVAKARLEELVASLPFGEL
FAQLWGSENVWYFAEEVFLKAGGRGSRTLWHQDTSYLPWAGNHWANAWISFESVPKKNALEIVRGSHKGPRYDGTTFRDP
NDPTQPLHGGDALPRLPDIEALRQNDPEAFEIISWATEPGDILLLHPGSLHGGAPVDEAFPDRHTFVFRFFGDDATFHPL
PEHSAGGYPQQGVLFTEELSTLKAGDAFRHPTFRQLI
>Mature_277_residues
MQLSVRKAFLEDGAVLIKGFLSKDQLAECRAAYDWAVENHGPHATRMFDGTEQQSHVDNANPVAKARLEELVASLPFGEL
FAQLWGSENVWYFAEEVFLKAGGRGSRTLWHQDTSYLPWAGNHWANAWISFESVPKKNALEIVRGSHKGPRYDGTTFRDP
NDPTQPLHGGDALPRLPDIEALRQNDPEAFEIISWATEPGDILLLHPGSLHGGAPVDEAFPDRHTFVFRFFGDDATFHPL
PEHSAGGYPQQGVLFTEELSTLKAGDAFRHPTFRQLI

Specific function: Unknown

COG id: COG5285

COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30940; Mature: 30940

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLSVRKAFLEDGAVLIKGFLSKDQLAECRAAYDWAVENHGPHATRMFDGTEQQSHVDNA
CCCHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHCCCC
NPVAKARLEELVASLPFGELFAQLWGSENVWYFAEEVFLKAGGRGSRTLWHQDTSYLPWA
CHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCEEEECCCCCCCCC
GNHWANAWISFESVPKKNALEIVRGSHKGPRYDGTTFRDPNDPTQPLHGGDALPRLPDIE
CCCHHHEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
ALRQNDPEAFEIISWATEPGDILLLHPGSLHGGAPVDEAFPDRHTFVFRFFGDDATFHPL
HHHCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCHHCCCCCCEEEEEEECCCCCCCCC
PEHSAGGYPQQGVLFTEELSTLKAGDAFRHPTFRQLI
CCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCHHHHCC
>Mature Secondary Structure
MQLSVRKAFLEDGAVLIKGFLSKDQLAECRAAYDWAVENHGPHATRMFDGTEQQSHVDNA
CCCHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHCCCC
NPVAKARLEELVASLPFGELFAQLWGSENVWYFAEEVFLKAGGRGSRTLWHQDTSYLPWA
CHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCEEEECCCCCCCCC
GNHWANAWISFESVPKKNALEIVRGSHKGPRYDGTTFRDPNDPTQPLHGGDALPRLPDIE
CCCHHHEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
ALRQNDPEAFEIISWATEPGDILLLHPGSLHGGAPVDEAFPDRHTFVFRFFGDDATFHPL
HHHCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCHHCCCCCCEEEEEEECCCCCCCCC
PEHSAGGYPQQGVLFTEELSTLKAGDAFRHPTFRQLI
CCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA