| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458910
Identifier: 77458910
GI number: 77458910
Start: 3091193
End: 3092881
Strand: Direct
Name: 77458910
Synonym: Pfl01_2685
Alternate gene names: NA
Gene position: 3091193-3092881 (Clockwise)
Preceding gene: 77458909
Following gene: 77458911
Centisome position: 48.01
GC content: 63.23
Gene sequence:
>1689_bases ATGGGACTGTTCGATTACAAAAATGCCGACGGCAAAGCGCTGTACAGCGATGCCATCGCCCTGACGCTGTATGCCTACAC GCCGACCGGGCAGGCCTTGCCCGGCACTGGCTGGAAGCCGATCGGCGCCACGGCGCTGGGCTATCAGGGCAAGGTCGGGG TGCAGGGCACGTTCTTCGGCGAGAAGGACGGCTTCACCAGCGCCGAAGCCGAAGTGCTCGGCAAGTACGACGCCGCGGGT AAGCTGATCGGCATCGGCGTGGCCTTCCGCGGCACCGGCGGGCTGGGTTACAGCGACACCTTCGGCGACATGAAAAACAA CCTGCTGGCTGCCATTGGCCCGTCGGACTACGCCACTCAGTACGCGAAAAACGCCTTCGACAACCTGCTCAAATCGGTGG CCGCGTTCGCTGTCGCCCACGGCATTGCGGCCAAGGACGTACTTGTCAGCGGCCACAGCCTCGGCGGTCTCGGGGTCAAC AGCGTGGCGGAGTTGAGCGCGAGCAACTGGGGCGGGTTTTTCAAGGACGCCAACTACATTTCGTTCGCCTCGCCGACCCA GAGCAGCACCGGCACGAACGTGCTGAACATCGGCTACGAAAACGACCCGGTGTTCCGCGTGCTCGACGGCACCACGTTCA GTACCGCGTCGATGGGCAAGCACGACAAACCGCACGATTCGACCACTGACAACATCGTCAACTTCAACGACAACTACGCG TCCACCGCGCAGAATCTGGTGCCGTTCAGCATCGCCAACCCGCTGAACTGGTCGGCCCACAGCTCGCTGGGGTATGCCGA CGGCCTGAATCGGGTGATCGCGTCGAAGTTCTACGGCCTGACGCACAAGGACTCGACGATCATCGTCTCCAACCTTGAGG ACGCGTCGCGGGGCAAGACCTGGGTCGAGGATCTGGGCCGCAGCGGCGAGCCGCACACCGGCAGCACGTTCATCATCGGC ACCGACAGCGGCGACTGGCTCAAGGGCGGGGCGGGCAACGACTTCCTCGAAGGCCTGGGCGGCGATGACCGTTTCCGTGA TGACGGCGGTTTCAACATCCTGCTCGGTGGCCAGGGCCACAATACCTTCGAGCTGCAAAAGCCGTTGCAGAACTTCAGCT TCGCCAACGACGGCGACGGCACGCTGTACGTGCGTGACGCCTACGGCGGCATCAGCATGACCCGCGACATCGGCGCGCTA GTGAGCAAGGAGTCGGGTTCGTGGTGGGGCAGCAAGGAAATCACCTGGACCGTCACCGCCAAAGGCCTGGCCAACGGTGC CGAACTGACCCAGTACAACCATTCGCTCAGCGGCGGCGCCATGGGCGACACCCTCAAAGCCACCGCCGACGGCGACTGGC TGTTCGGCCTGGGCGGTAACGATCACCTGCAAAGCGACAAGGCCCACGTGACCTTCGTCGGCGGTGCCGGCAATGACGTG ATGAGCGCGGTGGGTGGCAACAACACCTTCCTGTTCAGCGGCGCCTTCGGTTTTGACGCGATCAATGGCTACCAGGGCAG CGACAAACTGGTGTTCATGGGCGTCGAAGGCGCGGGGCAGGGCTACGACTACAAGCAACACGCGTCGCAGTCCGGAAGCG ATACCGTGCTGAAGATTGGCGACTTTGCCGTGACGCTGATCGGGGTCGGTGTGGCTAACCTGTCGGATTCGAGTTTCGTC TTCGCCTGA
Upstream 100 bases:
>100_bases AAAGGACCACGGTGTGGGCTTGACGCTGGACTGGCAGTTCTAAGGGGTAACGGCAGTTCTTTCGAGAACTGCCGTTTTTA AAAGGAAGAGAGAGCACAAC
Downstream 100 bases:
>100_bases CAAACGAAAGTTGTACTGAAATGCTCCGGGGCGCCTCGGGAGGGGCGTTCTGGTTGTGAGCTATCTCTGAACAATTCCAA CAAAAAGAGAGGCAACAGCA
Product: triacylglycerol lipase
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 562; Mature: 561
Protein sequence:
>562_residues MGLFDYKNADGKALYSDAIALTLYAYTPTGQALPGTGWKPIGATALGYQGKVGVQGTFFGEKDGFTSAEAEVLGKYDAAG KLIGIGVAFRGTGGLGYSDTFGDMKNNLLAAIGPSDYATQYAKNAFDNLLKSVAAFAVAHGIAAKDVLVSGHSLGGLGVN SVAELSASNWGGFFKDANYISFASPTQSSTGTNVLNIGYENDPVFRVLDGTTFSTASMGKHDKPHDSTTDNIVNFNDNYA STAQNLVPFSIANPLNWSAHSSLGYADGLNRVIASKFYGLTHKDSTIIVSNLEDASRGKTWVEDLGRSGEPHTGSTFIIG TDSGDWLKGGAGNDFLEGLGGDDRFRDDGGFNILLGGQGHNTFELQKPLQNFSFANDGDGTLYVRDAYGGISMTRDIGAL VSKESGSWWGSKEITWTVTAKGLANGAELTQYNHSLSGGAMGDTLKATADGDWLFGLGGNDHLQSDKAHVTFVGGAGNDV MSAVGGNNTFLFSGAFGFDAINGYQGSDKLVFMGVEGAGQGYDYKQHASQSGSDTVLKIGDFAVTLIGVGVANLSDSSFV FA
Sequences:
>Translated_562_residues MGLFDYKNADGKALYSDAIALTLYAYTPTGQALPGTGWKPIGATALGYQGKVGVQGTFFGEKDGFTSAEAEVLGKYDAAG KLIGIGVAFRGTGGLGYSDTFGDMKNNLLAAIGPSDYATQYAKNAFDNLLKSVAAFAVAHGIAAKDVLVSGHSLGGLGVN SVAELSASNWGGFFKDANYISFASPTQSSTGTNVLNIGYENDPVFRVLDGTTFSTASMGKHDKPHDSTTDNIVNFNDNYA STAQNLVPFSIANPLNWSAHSSLGYADGLNRVIASKFYGLTHKDSTIIVSNLEDASRGKTWVEDLGRSGEPHTGSTFIIG TDSGDWLKGGAGNDFLEGLGGDDRFRDDGGFNILLGGQGHNTFELQKPLQNFSFANDGDGTLYVRDAYGGISMTRDIGAL VSKESGSWWGSKEITWTVTAKGLANGAELTQYNHSLSGGAMGDTLKATADGDWLFGLGGNDHLQSDKAHVTFVGGAGNDV MSAVGGNNTFLFSGAFGFDAINGYQGSDKLVFMGVEGAGQGYDYKQHASQSGSDTVLKIGDFAVTLIGVGVANLSDSSFV FA >Mature_561_residues GLFDYKNADGKALYSDAIALTLYAYTPTGQALPGTGWKPIGATALGYQGKVGVQGTFFGEKDGFTSAEAEVLGKYDAAGK LIGIGVAFRGTGGLGYSDTFGDMKNNLLAAIGPSDYATQYAKNAFDNLLKSVAAFAVAHGIAAKDVLVSGHSLGGLGVNS VAELSASNWGGFFKDANYISFASPTQSSTGTNVLNIGYENDPVFRVLDGTTFSTASMGKHDKPHDSTTDNIVNFNDNYAS TAQNLVPFSIANPLNWSAHSSLGYADGLNRVIASKFYGLTHKDSTIIVSNLEDASRGKTWVEDLGRSGEPHTGSTFIIGT DSGDWLKGGAGNDFLEGLGGDDRFRDDGGFNILLGGQGHNTFELQKPLQNFSFANDGDGTLYVRDAYGGISMTRDIGALV SKESGSWWGSKEITWTVTAKGLANGAELTQYNHSLSGGAMGDTLKATADGDWLFGLGGNDHLQSDKAHVTFVGGAGNDVM SAVGGNNTFLFSGAFGFDAINGYQGSDKLVFMGVEGAGQGYDYKQHASQSGSDTVLKIGDFAVTLIGVGVANLSDSSFVF A
Specific function: Unknown
COG id: COG2931
COG function: function code Q; RTX toxins and related Ca2+-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 hemolysin-type calcium-binding repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018511 - InterPro: IPR001343 - InterPro: IPR002921 - InterPro: IPR011049 [H]
Pfam domain/function: PF00353 HemolysinCabind; PF01764 Lipase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 58674; Mature: 58543
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFDYKNADGKALYSDAIALTLYAYTPTGQALPGTGWKPIGATALGYQGKVGVQGTFFG CCCCCCCCCCCCEEECCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECC EKDGFTSAEAEVLGKYDAAGKLIGIGVAFRGTGGLGYSDTFGDMKNNLLAAIGPSDYATQ CCCCCCCHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHCCEEEEECCCHHHHH YAKNAFDNLLKSVAAFAVAHGIAAKDVLVSGHSLGGLGVNSVAELSASNWGGFFKDANYI HHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCEE SFASPTQSSTGTNVLNIGYENDPVFRVLDGTTFSTASMGKHDKPHDSTTDNIVNFNDNYA EECCCCCCCCCCEEEEECCCCCCEEEEECCCEECCCCCCCCCCCCCCCCCCEEECCCCHH STAQNLVPFSIANPLNWSAHSSLGYADGLNRVIASKFYGLTHKDSTIIVSNLEDASRGKT HHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCH WVEDLGRSGEPHTGSTFIIGTDSGDWLKGGAGNDFLEGLGGDDRFRDDGGFNILLGGQGH HHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCC NTFELQKPLQNFSFANDGDGTLYVRDAYGGISMTRDIGALVSKESGSWWGSKEITWTVTA CEEHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEE KGLANGAELTQYNHSLSGGAMGDTLKATADGDWLFGLGGNDHLQSDKAHVTFVGGAGNDV CCCCCCCHHHHCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCEEEEECCCCCHH MSAVGGNNTFLFSGAFGFDAINGYQGSDKLVFMGVEGAGQGYDYKQHASQSGSDTVLKIG HHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCEEEEC DFAVTLIGVGVANLSDSSFVFA CEEEEEEEEEEECCCCCCEEEC >Mature Secondary Structure GLFDYKNADGKALYSDAIALTLYAYTPTGQALPGTGWKPIGATALGYQGKVGVQGTFFG CCCCCCCCCCCEEECCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECC EKDGFTSAEAEVLGKYDAAGKLIGIGVAFRGTGGLGYSDTFGDMKNNLLAAIGPSDYATQ CCCCCCCHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHCCEEEEECCCHHHHH YAKNAFDNLLKSVAAFAVAHGIAAKDVLVSGHSLGGLGVNSVAELSASNWGGFFKDANYI HHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCEE SFASPTQSSTGTNVLNIGYENDPVFRVLDGTTFSTASMGKHDKPHDSTTDNIVNFNDNYA EECCCCCCCCCCEEEEECCCCCCEEEEECCCEECCCCCCCCCCCCCCCCCCEEECCCCHH STAQNLVPFSIANPLNWSAHSSLGYADGLNRVIASKFYGLTHKDSTIIVSNLEDASRGKT HHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCH WVEDLGRSGEPHTGSTFIIGTDSGDWLKGGAGNDFLEGLGGDDRFRDDGGFNILLGGQGH HHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCC NTFELQKPLQNFSFANDGDGTLYVRDAYGGISMTRDIGALVSKESGSWWGSKEITWTVTA CEEHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEE KGLANGAELTQYNHSLSGGAMGDTLKATADGDWLFGLGGNDHLQSDKAHVTFVGGAGNDV CCCCCCCHHHHCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCEEEEECCCCCHH MSAVGGNNTFLFSGAFGFDAINGYQGSDKLVFMGVEGAGQGYDYKQHASQSGSDTVLKIG HHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCCCEEEEC DFAVTLIGVGVANLSDSSFVFA CEEEEEEEEEEECCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1599260 [H]