Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77458911

Identifier: 77458911

GI number: 77458911

Start: 3092982

End: 3094835

Strand: Direct

Name: 77458911

Synonym: Pfl01_2686

Alternate gene names: NA

Gene position: 3092982-3094835 (Clockwise)

Preceding gene: 77458910

Following gene: 77458912

Centisome position: 48.04

GC content: 62.57

Gene sequence:

>1854_bases
ATGGGTGTGTATGACTACAAGAACTTCGGTACGGCGGAATCCAAGGCGCTGTTCAGCGATGCCATGGCCATTACGCTGTA
TTCCTACCACAACCTCGATAACGGCTTTGCCGTCGGTTATCAGCACAACGGCTTCGGCCTCGGTTTGCCGGCCACGCTGG
TGACCGCGCTGATCGGCGGTACGGATTCCCAGGGGGTGATCCCCGGCATTCCGTGGAACCCCGATTCGGAAAAAGCCGCA
CTCGACGCGGTGAAAAAAGCCGGCTGGACCCCGATCACCGCCGCGCAACTGGGTTACGAGGGCAAGACCGATGCGCGCGG
CACCTTTTTCGGCGAAAAAGCCGGCTACACCAGCGCTCAGGTAGAAATCCTCGGCAAATACGACGCTCAGGGCCATCTGA
CGGAAATCGGCATTGCCTTTCGCGGCACCAGTGGCCCACGGGAAATCCTGATTGGCGACTCCATCGGTGACGTGATCAAC
GACTTGCTCGCCGCATTCGGGCCCAAGGATTACGCCAAGAACTACGTCGGCGAGGCCTTTGGCAACCTGATGAACGATGT
GGTGGCGTTCGCCAAGGCCAACGGCCTGAGCGGCAAGGACGTGCTGGTCAGCGGTCACAGCCTCGGCGGGCTGGCGGTCA
ACAGCATGGCGGACTTGAGCACCAGCAAATGGAGCGGGTTCTTCCAGGATTCCAACTACATCGCCTACGCCTCGCCGACC
CAGAGCAGCACCGACAAGGTGCTCAACGTCGGCTATGAAAACGATCCGGTGTTCCGCGCCCTCGACGGCTCGAACTTCAC
CGGCGCCTCGCTCGGTGTGCACGACGCGCCGAAGGAGTCGGCGACCGACAACATCGTCAGCTTCAACGACCACTACGCCT
CGGCGGCGTGGAACGTGCTGCCGTTCTCGATCGTCAACATTCCGACCTGGATCTCGCATCTGCCGACCGCTTATGGCGAA
GGCATGAACCGGGTGATCGAGTCGAAGTTCTACGACCTGACCAGCAAGGATTCGACGATCATCGTCGCCAACCTGTCGGA
TCCGGCGCGGGCCAACACCTGGGTGCAGGACCTGAACCGCAACGCCGAAACCCACAAGGGCAGCACGTTCATCATCGGCA
GCGACGGCAACGACTTGATCCAGGGCGGCAGCGGCAACGATTATCTGGAGGGCCGCGCCGGCAACGACACGTTCCGCGAC
GGTGGGGGCTACAACATCCTGCTCGGCGGCTCGGGCAACAACACCCTGGAGTTGCAGAAGTCGGTCAATAGCTTCGACTT
CGCCAACGACGGCGCCGGCAACCTGTACATCCGCGATGCCAACGGCGGAATCAGCATCACCCGCGACATCGGCAGCATCG
TCACCAAGGAGCCGGGCTTCCTCTGGGGCCTGTTCAAGGACGACGTGACCCACAGCGTCACGGCGGCCGGTCTTAAGGTC
GGCAACAACGTCACCCAGTACGAATCGAGCGTGAAGGGCACCGGCGGTGCCGACACCCTCAAGGCCAAGGCCAGCGGAGA
CTGGCTGTTCGGCCTGGACGGCAACGACCATCTGATCGGCGGGGCGGGCAACGACGTGTTCGTCGGCGGCGCCGGCAATG
ATCTGATGGAGTCGGGCGGCGGGGCGGATACCTTCCTGTTCAACGGCGCATTCGGCCAGGATCGCGTGGTGGGTTACACC
GCCAACGACAAACTGGTGTTCCTCGGCGTGCAGGGGGTGTTGCCGGGCGACGACTTGCGCGCACACGCCACGGCGGTGGG
GCAGGATACGGTGCTGAAGTTTGGCGCTGATTCGGTAACGCTGGTCGGGGTTGCCTTGAACAGCCTGAGTGCCGACGGGA
TCGTGATCGCCTGA

Upstream 100 bases:

>100_bases
CAAACGAAAGTTGTACTGAAATGCTCCGGGGCGCCTCGGGAGGGGCGTTCTGGTTGTGAGCTATCTCTGAACAATTCCAA
CAAAAAGAGAGGCAACAGCA

Downstream 100 bases:

>100_bases
CGACAAGGGTGGGGAGGGAGCGTATTCCCTCCCCATAGCAAAAGTGACTCACCAGCCATTCCCTGACTCCAATCCCTGCA
CCAACAGGAAATGCGGCCTA

Product: lipase, class 3

Products: NA

Alternate protein names: Triacylglycerol lipase [H]

Number of amino acids: Translated: 617; Mature: 616

Protein sequence:

>617_residues
MGVYDYKNFGTAESKALFSDAMAITLYSYHNLDNGFAVGYQHNGFGLGLPATLVTALIGGTDSQGVIPGIPWNPDSEKAA
LDAVKKAGWTPITAAQLGYEGKTDARGTFFGEKAGYTSAQVEILGKYDAQGHLTEIGIAFRGTSGPREILIGDSIGDVIN
DLLAAFGPKDYAKNYVGEAFGNLMNDVVAFAKANGLSGKDVLVSGHSLGGLAVNSMADLSTSKWSGFFQDSNYIAYASPT
QSSTDKVLNVGYENDPVFRALDGSNFTGASLGVHDAPKESATDNIVSFNDHYASAAWNVLPFSIVNIPTWISHLPTAYGE
GMNRVIESKFYDLTSKDSTIIVANLSDPARANTWVQDLNRNAETHKGSTFIIGSDGNDLIQGGSGNDYLEGRAGNDTFRD
GGGYNILLGGSGNNTLELQKSVNSFDFANDGAGNLYIRDANGGISITRDIGSIVTKEPGFLWGLFKDDVTHSVTAAGLKV
GNNVTQYESSVKGTGGADTLKAKASGDWLFGLDGNDHLIGGAGNDVFVGGAGNDLMESGGGADTFLFNGAFGQDRVVGYT
ANDKLVFLGVQGVLPGDDLRAHATAVGQDTVLKFGADSVTLVGVALNSLSADGIVIA

Sequences:

>Translated_617_residues
MGVYDYKNFGTAESKALFSDAMAITLYSYHNLDNGFAVGYQHNGFGLGLPATLVTALIGGTDSQGVIPGIPWNPDSEKAA
LDAVKKAGWTPITAAQLGYEGKTDARGTFFGEKAGYTSAQVEILGKYDAQGHLTEIGIAFRGTSGPREILIGDSIGDVIN
DLLAAFGPKDYAKNYVGEAFGNLMNDVVAFAKANGLSGKDVLVSGHSLGGLAVNSMADLSTSKWSGFFQDSNYIAYASPT
QSSTDKVLNVGYENDPVFRALDGSNFTGASLGVHDAPKESATDNIVSFNDHYASAAWNVLPFSIVNIPTWISHLPTAYGE
GMNRVIESKFYDLTSKDSTIIVANLSDPARANTWVQDLNRNAETHKGSTFIIGSDGNDLIQGGSGNDYLEGRAGNDTFRD
GGGYNILLGGSGNNTLELQKSVNSFDFANDGAGNLYIRDANGGISITRDIGSIVTKEPGFLWGLFKDDVTHSVTAAGLKV
GNNVTQYESSVKGTGGADTLKAKASGDWLFGLDGNDHLIGGAGNDVFVGGAGNDLMESGGGADTFLFNGAFGQDRVVGYT
ANDKLVFLGVQGVLPGDDLRAHATAVGQDTVLKFGADSVTLVGVALNSLSADGIVIA
>Mature_616_residues
GVYDYKNFGTAESKALFSDAMAITLYSYHNLDNGFAVGYQHNGFGLGLPATLVTALIGGTDSQGVIPGIPWNPDSEKAAL
DAVKKAGWTPITAAQLGYEGKTDARGTFFGEKAGYTSAQVEILGKYDAQGHLTEIGIAFRGTSGPREILIGDSIGDVIND
LLAAFGPKDYAKNYVGEAFGNLMNDVVAFAKANGLSGKDVLVSGHSLGGLAVNSMADLSTSKWSGFFQDSNYIAYASPTQ
SSTDKVLNVGYENDPVFRALDGSNFTGASLGVHDAPKESATDNIVSFNDHYASAAWNVLPFSIVNIPTWISHLPTAYGEG
MNRVIESKFYDLTSKDSTIIVANLSDPARANTWVQDLNRNAETHKGSTFIIGSDGNDLIQGGSGNDYLEGRAGNDTFRDG
GGYNILLGGSGNNTLELQKSVNSFDFANDGAGNLYIRDANGGISITRDIGSIVTKEPGFLWGLFKDDVTHSVTAAGLKVG
NNVTQYESSVKGTGGADTLKAKASGDWLFGLDGNDHLIGGAGNDVFVGGAGNDLMESGGGADTFLFNGAFGQDRVVGYTA
NDKLVFLGVQGVLPGDDLRAHATAVGQDTVLKFGADSVTLVGVALNSLSADGIVIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 hemolysin-type calcium-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018511
- InterPro:   IPR001343
- InterPro:   IPR002921
- InterPro:   IPR011049 [H]

Pfam domain/function: PF00353 HemolysinCabind; PF01764 Lipase_3 [H]

EC number: =3.1.1.3 [H]

Molecular weight: Translated: 64457; Mature: 64326

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS00120 LIPASE_SER ; PS00330 HEMOLYSIN_CALCIUM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVYDYKNFGTAESKALFSDAMAITLYSYHNLDNGFAVGYQHNGFGLGLPATLVTALIGG
CCCCCCCCCCCCHHHHHHHCCEEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCC
TDSQGVIPGIPWNPDSEKAALDAVKKAGWTPITAAQLGYEGKTDARGTFFGEKAGYTSAQ
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCCEECCCCCCCCEEE
VEILGKYDAQGHLTEIGIAFRGTSGPREILIGDSIGDVINDLLAAFGPKDYAKNYVGEAF
EEEEEEECCCCCEEEEEEEEECCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHH
GNLMNDVVAFAKANGLSGKDVLVSGHSLGGLAVNSMADLSTSKWSGFFQDSNYIAYASPT
HHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCHHHCCCCCCCCEEECCCEEEEECCC
QSSTDKVLNVGYENDPVFRALDGSNFTGASLGVHDAPKESATDNIVSFNDHYASAAWNVL
CCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHCCCCC
PFSIVNIPTWISHLPTAYGEGMNRVIESKFYDLTSKDSTIIVANLSDPARANTWVQDLNR
CEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCC
NAETHKGSTFIIGSDGNDLIQGGSGNDYLEGRAGNDTFRDGGGYNILLGGSGNNTLELQK
CCCCCCCCEEEEECCCCCEEECCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEE
SVNSFDFANDGAGNLYIRDANGGISITRDIGSIVTKEPGFLWGLFKDDVTHSVTAAGLKV
CCCCCCCCCCCCCEEEEEECCCCEEEEECHHHHHCCCCCEEEEEEHHCCHHHHHHHHEEC
GNNVTQYESSVKGTGGADTLKAKASGDWLFGLDGNDHLIGGAGNDVFVGGAGNDLMESGG
CCCHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCEEEECCCCEEEEECCCCHHHHCCC
GADTFLFNGAFGQDRVVGYTANDKLVFLGVQGVLPGDDLRAHATAVGQDTVLKFGADSVT
CCCEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHEECCCCEEEEECCCCEE
LVGVALNSLSADGIVIA
EEEEEHHCCCCCCEEEC
>Mature Secondary Structure 
GVYDYKNFGTAESKALFSDAMAITLYSYHNLDNGFAVGYQHNGFGLGLPATLVTALIGG
CCCCCCCCCCCHHHHHHHCCEEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCC
TDSQGVIPGIPWNPDSEKAALDAVKKAGWTPITAAQLGYEGKTDARGTFFGEKAGYTSAQ
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCCEECCCCCCCCEEE
VEILGKYDAQGHLTEIGIAFRGTSGPREILIGDSIGDVINDLLAAFGPKDYAKNYVGEAF
EEEEEEECCCCCEEEEEEEEECCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHH
GNLMNDVVAFAKANGLSGKDVLVSGHSLGGLAVNSMADLSTSKWSGFFQDSNYIAYASPT
HHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCHHHCCCCCCCCEEECCCEEEEECCC
QSSTDKVLNVGYENDPVFRALDGSNFTGASLGVHDAPKESATDNIVSFNDHYASAAWNVL
CCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHCCCCC
PFSIVNIPTWISHLPTAYGEGMNRVIESKFYDLTSKDSTIIVANLSDPARANTWVQDLNR
CEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCC
NAETHKGSTFIIGSDGNDLIQGGSGNDYLEGRAGNDTFRDGGGYNILLGGSGNNTLELQK
CCCCCCCCEEEEECCCCCEEECCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEE
SVNSFDFANDGAGNLYIRDANGGISITRDIGSIVTKEPGFLWGLFKDDVTHSVTAAGLKV
CCCCCCCCCCCCCEEEEEECCCCEEEEECHHHHHCCCCCEEEEEEHHCCHHHHHHHHEEC
GNNVTQYESSVKGTGGADTLKAKASGDWLFGLDGNDHLIGGAGNDVFVGGAGNDLMESGG
CCCHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCEEEECCCCEEEEECCCCHHHHCCC
GADTFLFNGAFGQDRVVGYTANDKLVFLGVQGVLPGDDLRAHATAVGQDTVLKFGADSVT
CCCEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHEECCCCEEEEECCCCEE
LVGVALNSLSADGIVIA
EEEEEHHCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1599260 [H]