| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458911
Identifier: 77458911
GI number: 77458911
Start: 3092982
End: 3094835
Strand: Direct
Name: 77458911
Synonym: Pfl01_2686
Alternate gene names: NA
Gene position: 3092982-3094835 (Clockwise)
Preceding gene: 77458910
Following gene: 77458912
Centisome position: 48.04
GC content: 62.57
Gene sequence:
>1854_bases ATGGGTGTGTATGACTACAAGAACTTCGGTACGGCGGAATCCAAGGCGCTGTTCAGCGATGCCATGGCCATTACGCTGTA TTCCTACCACAACCTCGATAACGGCTTTGCCGTCGGTTATCAGCACAACGGCTTCGGCCTCGGTTTGCCGGCCACGCTGG TGACCGCGCTGATCGGCGGTACGGATTCCCAGGGGGTGATCCCCGGCATTCCGTGGAACCCCGATTCGGAAAAAGCCGCA CTCGACGCGGTGAAAAAAGCCGGCTGGACCCCGATCACCGCCGCGCAACTGGGTTACGAGGGCAAGACCGATGCGCGCGG CACCTTTTTCGGCGAAAAAGCCGGCTACACCAGCGCTCAGGTAGAAATCCTCGGCAAATACGACGCTCAGGGCCATCTGA CGGAAATCGGCATTGCCTTTCGCGGCACCAGTGGCCCACGGGAAATCCTGATTGGCGACTCCATCGGTGACGTGATCAAC GACTTGCTCGCCGCATTCGGGCCCAAGGATTACGCCAAGAACTACGTCGGCGAGGCCTTTGGCAACCTGATGAACGATGT GGTGGCGTTCGCCAAGGCCAACGGCCTGAGCGGCAAGGACGTGCTGGTCAGCGGTCACAGCCTCGGCGGGCTGGCGGTCA ACAGCATGGCGGACTTGAGCACCAGCAAATGGAGCGGGTTCTTCCAGGATTCCAACTACATCGCCTACGCCTCGCCGACC CAGAGCAGCACCGACAAGGTGCTCAACGTCGGCTATGAAAACGATCCGGTGTTCCGCGCCCTCGACGGCTCGAACTTCAC CGGCGCCTCGCTCGGTGTGCACGACGCGCCGAAGGAGTCGGCGACCGACAACATCGTCAGCTTCAACGACCACTACGCCT CGGCGGCGTGGAACGTGCTGCCGTTCTCGATCGTCAACATTCCGACCTGGATCTCGCATCTGCCGACCGCTTATGGCGAA GGCATGAACCGGGTGATCGAGTCGAAGTTCTACGACCTGACCAGCAAGGATTCGACGATCATCGTCGCCAACCTGTCGGA TCCGGCGCGGGCCAACACCTGGGTGCAGGACCTGAACCGCAACGCCGAAACCCACAAGGGCAGCACGTTCATCATCGGCA GCGACGGCAACGACTTGATCCAGGGCGGCAGCGGCAACGATTATCTGGAGGGCCGCGCCGGCAACGACACGTTCCGCGAC GGTGGGGGCTACAACATCCTGCTCGGCGGCTCGGGCAACAACACCCTGGAGTTGCAGAAGTCGGTCAATAGCTTCGACTT CGCCAACGACGGCGCCGGCAACCTGTACATCCGCGATGCCAACGGCGGAATCAGCATCACCCGCGACATCGGCAGCATCG TCACCAAGGAGCCGGGCTTCCTCTGGGGCCTGTTCAAGGACGACGTGACCCACAGCGTCACGGCGGCCGGTCTTAAGGTC GGCAACAACGTCACCCAGTACGAATCGAGCGTGAAGGGCACCGGCGGTGCCGACACCCTCAAGGCCAAGGCCAGCGGAGA CTGGCTGTTCGGCCTGGACGGCAACGACCATCTGATCGGCGGGGCGGGCAACGACGTGTTCGTCGGCGGCGCCGGCAATG ATCTGATGGAGTCGGGCGGCGGGGCGGATACCTTCCTGTTCAACGGCGCATTCGGCCAGGATCGCGTGGTGGGTTACACC GCCAACGACAAACTGGTGTTCCTCGGCGTGCAGGGGGTGTTGCCGGGCGACGACTTGCGCGCACACGCCACGGCGGTGGG GCAGGATACGGTGCTGAAGTTTGGCGCTGATTCGGTAACGCTGGTCGGGGTTGCCTTGAACAGCCTGAGTGCCGACGGGA TCGTGATCGCCTGA
Upstream 100 bases:
>100_bases CAAACGAAAGTTGTACTGAAATGCTCCGGGGCGCCTCGGGAGGGGCGTTCTGGTTGTGAGCTATCTCTGAACAATTCCAA CAAAAAGAGAGGCAACAGCA
Downstream 100 bases:
>100_bases CGACAAGGGTGGGGAGGGAGCGTATTCCCTCCCCATAGCAAAAGTGACTCACCAGCCATTCCCTGACTCCAATCCCTGCA CCAACAGGAAATGCGGCCTA
Product: lipase, class 3
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 617; Mature: 616
Protein sequence:
>617_residues MGVYDYKNFGTAESKALFSDAMAITLYSYHNLDNGFAVGYQHNGFGLGLPATLVTALIGGTDSQGVIPGIPWNPDSEKAA LDAVKKAGWTPITAAQLGYEGKTDARGTFFGEKAGYTSAQVEILGKYDAQGHLTEIGIAFRGTSGPREILIGDSIGDVIN DLLAAFGPKDYAKNYVGEAFGNLMNDVVAFAKANGLSGKDVLVSGHSLGGLAVNSMADLSTSKWSGFFQDSNYIAYASPT QSSTDKVLNVGYENDPVFRALDGSNFTGASLGVHDAPKESATDNIVSFNDHYASAAWNVLPFSIVNIPTWISHLPTAYGE GMNRVIESKFYDLTSKDSTIIVANLSDPARANTWVQDLNRNAETHKGSTFIIGSDGNDLIQGGSGNDYLEGRAGNDTFRD GGGYNILLGGSGNNTLELQKSVNSFDFANDGAGNLYIRDANGGISITRDIGSIVTKEPGFLWGLFKDDVTHSVTAAGLKV GNNVTQYESSVKGTGGADTLKAKASGDWLFGLDGNDHLIGGAGNDVFVGGAGNDLMESGGGADTFLFNGAFGQDRVVGYT ANDKLVFLGVQGVLPGDDLRAHATAVGQDTVLKFGADSVTLVGVALNSLSADGIVIA
Sequences:
>Translated_617_residues MGVYDYKNFGTAESKALFSDAMAITLYSYHNLDNGFAVGYQHNGFGLGLPATLVTALIGGTDSQGVIPGIPWNPDSEKAA LDAVKKAGWTPITAAQLGYEGKTDARGTFFGEKAGYTSAQVEILGKYDAQGHLTEIGIAFRGTSGPREILIGDSIGDVIN DLLAAFGPKDYAKNYVGEAFGNLMNDVVAFAKANGLSGKDVLVSGHSLGGLAVNSMADLSTSKWSGFFQDSNYIAYASPT QSSTDKVLNVGYENDPVFRALDGSNFTGASLGVHDAPKESATDNIVSFNDHYASAAWNVLPFSIVNIPTWISHLPTAYGE GMNRVIESKFYDLTSKDSTIIVANLSDPARANTWVQDLNRNAETHKGSTFIIGSDGNDLIQGGSGNDYLEGRAGNDTFRD GGGYNILLGGSGNNTLELQKSVNSFDFANDGAGNLYIRDANGGISITRDIGSIVTKEPGFLWGLFKDDVTHSVTAAGLKV GNNVTQYESSVKGTGGADTLKAKASGDWLFGLDGNDHLIGGAGNDVFVGGAGNDLMESGGGADTFLFNGAFGQDRVVGYT ANDKLVFLGVQGVLPGDDLRAHATAVGQDTVLKFGADSVTLVGVALNSLSADGIVIA >Mature_616_residues GVYDYKNFGTAESKALFSDAMAITLYSYHNLDNGFAVGYQHNGFGLGLPATLVTALIGGTDSQGVIPGIPWNPDSEKAAL DAVKKAGWTPITAAQLGYEGKTDARGTFFGEKAGYTSAQVEILGKYDAQGHLTEIGIAFRGTSGPREILIGDSIGDVIND LLAAFGPKDYAKNYVGEAFGNLMNDVVAFAKANGLSGKDVLVSGHSLGGLAVNSMADLSTSKWSGFFQDSNYIAYASPTQ SSTDKVLNVGYENDPVFRALDGSNFTGASLGVHDAPKESATDNIVSFNDHYASAAWNVLPFSIVNIPTWISHLPTAYGEG MNRVIESKFYDLTSKDSTIIVANLSDPARANTWVQDLNRNAETHKGSTFIIGSDGNDLIQGGSGNDYLEGRAGNDTFRDG GGYNILLGGSGNNTLELQKSVNSFDFANDGAGNLYIRDANGGISITRDIGSIVTKEPGFLWGLFKDDVTHSVTAAGLKVG NNVTQYESSVKGTGGADTLKAKASGDWLFGLDGNDHLIGGAGNDVFVGGAGNDLMESGGGADTFLFNGAFGQDRVVGYTA NDKLVFLGVQGVLPGDDLRAHATAVGQDTVLKFGADSVTLVGVALNSLSADGIVIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 hemolysin-type calcium-binding repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018511 - InterPro: IPR001343 - InterPro: IPR002921 - InterPro: IPR011049 [H]
Pfam domain/function: PF00353 HemolysinCabind; PF01764 Lipase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 64457; Mature: 64326
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00120 LIPASE_SER ; PS00330 HEMOLYSIN_CALCIUM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVYDYKNFGTAESKALFSDAMAITLYSYHNLDNGFAVGYQHNGFGLGLPATLVTALIGG CCCCCCCCCCCCHHHHHHHCCEEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCC TDSQGVIPGIPWNPDSEKAALDAVKKAGWTPITAAQLGYEGKTDARGTFFGEKAGYTSAQ CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCCEECCCCCCCCEEE VEILGKYDAQGHLTEIGIAFRGTSGPREILIGDSIGDVINDLLAAFGPKDYAKNYVGEAF EEEEEEECCCCCEEEEEEEEECCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHH GNLMNDVVAFAKANGLSGKDVLVSGHSLGGLAVNSMADLSTSKWSGFFQDSNYIAYASPT HHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCHHHCCCCCCCCEEECCCEEEEECCC QSSTDKVLNVGYENDPVFRALDGSNFTGASLGVHDAPKESATDNIVSFNDHYASAAWNVL CCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHCCCCC PFSIVNIPTWISHLPTAYGEGMNRVIESKFYDLTSKDSTIIVANLSDPARANTWVQDLNR CEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCC NAETHKGSTFIIGSDGNDLIQGGSGNDYLEGRAGNDTFRDGGGYNILLGGSGNNTLELQK CCCCCCCCEEEEECCCCCEEECCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEE SVNSFDFANDGAGNLYIRDANGGISITRDIGSIVTKEPGFLWGLFKDDVTHSVTAAGLKV CCCCCCCCCCCCCEEEEEECCCCEEEEECHHHHHCCCCCEEEEEEHHCCHHHHHHHHEEC GNNVTQYESSVKGTGGADTLKAKASGDWLFGLDGNDHLIGGAGNDVFVGGAGNDLMESGG CCCHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCEEEECCCCEEEEECCCCHHHHCCC GADTFLFNGAFGQDRVVGYTANDKLVFLGVQGVLPGDDLRAHATAVGQDTVLKFGADSVT CCCEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHEECCCCEEEEECCCCEE LVGVALNSLSADGIVIA EEEEEHHCCCCCCEEEC >Mature Secondary Structure GVYDYKNFGTAESKALFSDAMAITLYSYHNLDNGFAVGYQHNGFGLGLPATLVTALIGG CCCCCCCCCCCHHHHHHHCCEEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCC TDSQGVIPGIPWNPDSEKAALDAVKKAGWTPITAAQLGYEGKTDARGTFFGEKAGYTSAQ CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHCCCCCCCCCCCEECCCCCCCCEEE VEILGKYDAQGHLTEIGIAFRGTSGPREILIGDSIGDVINDLLAAFGPKDYAKNYVGEAF EEEEEEECCCCCEEEEEEEEECCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHH GNLMNDVVAFAKANGLSGKDVLVSGHSLGGLAVNSMADLSTSKWSGFFQDSNYIAYASPT HHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCHHHCCCCCCCCEEECCCEEEEECCC QSSTDKVLNVGYENDPVFRALDGSNFTGASLGVHDAPKESATDNIVSFNDHYASAAWNVL CCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHCCCCC PFSIVNIPTWISHLPTAYGEGMNRVIESKFYDLTSKDSTIIVANLSDPARANTWVQDLNR CEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCC NAETHKGSTFIIGSDGNDLIQGGSGNDYLEGRAGNDTFRDGGGYNILLGGSGNNTLELQK CCCCCCCCEEEEECCCCCEEECCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCEEEEEE SVNSFDFANDGAGNLYIRDANGGISITRDIGSIVTKEPGFLWGLFKDDVTHSVTAAGLKV CCCCCCCCCCCCCEEEEEECCCCEEEEECHHHHHCCCCCEEEEEEHHCCHHHHHHHHEEC GNNVTQYESSVKGTGGADTLKAKASGDWLFGLDGNDHLIGGAGNDVFVGGAGNDLMESGG CCCHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCEEEECCCCEEEEECCCCHHHHCCC GADTFLFNGAFGQDRVVGYTANDKLVFLGVQGVLPGDDLRAHATAVGQDTVLKFGADSVT CCCEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCCCCHHHHEECCCCEEEEECCCCEE LVGVALNSLSADGIVIA EEEEEHHCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1599260 [H]