Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is aaeB [H]
Identifier: 77458880
GI number: 77458880
Start: 3043650
End: 3045785
Strand: Direct
Name: aaeB [H]
Synonym: Pfl01_2655
Alternate gene names: 77458880
Gene position: 3043650-3045785 (Clockwise)
Preceding gene: 77458875
Following gene: 77458881
Centisome position: 47.27
GC content: 60.91
Gene sequence:
>2136_bases ATGCAATCCCTGCTTATTTATTTCAAGGCGGTGATCCACCCCAGCCAGGCAGTGCTGCTGTTTGGTTTGCGCACGATTGC CGCCGGATTGCTGACGTTGTACCTGGCGTTCCTGTTCGATCTGGACCAGCCGAAGTGGTCGATCATGGCCGTGGTGATCA TCAGCCAGCCCTTGGCCGGGATGGCGCTGGCTCGCAGCTTCGGACAAATCATCGGAACGACCCTCGGCGCGATGGTGGCG GTGCTGCTGATGGCGATCTTTCCCCAGGCACCGTTGCCATTCATCACGACCCTGGCGCTGTGGCTGGCCCTGTGCACGGC CGGCGGCACGTTATTGCGCTACACCAGTTCCCAGGCGTTCGTGCTCAGCGGGTACACCGCCGTAGTGGTGGCGCTGCTGG CGATTCCGGATCAGGACGGCACCTTTTTGCTGGCGGTGACCCGGGTCACCGAAACCTTGCTGGCGGTGGCATGCGTTTGC GTGGTCAGCCTGCTGACGGCTCGGCCGGAGGCGGTATCGCGCAACTATTTCGCGAAGGTCGATCAGGTGATCAGACTGGT CGCCAGCCATTCAGCCGCGGTGCTTCGAACCGAAGAAAGCGAAGCGGACTTTCAGCGCCGGCAAATGCAGCTGCTGGGGG AAATCAGCGCTCTTGAAGGGCTGCGCCGGCACTTGTATTTCGATGCTCCGCGTCTGCGCAGCGCCAACAATCTGGTTTTG TTACTCGGCAATCAACTGATGCTGCTGACTTCGCGCCTCACCGCGTTGCGTCACCAGCGGGAATTGCTTACCGAGCGCTG GGAGGGCGATCTGCCGCTGGACATCCAGCAATTGCGCGCCGAGGAGCTGGCACTTCTTGATCAGCTCGCACAGCAAGGGC GATCATTGCCGGCCGAGGTGCGGCACCAGTTCGTCGCGCTGCAACAGCAATTCGAAGCGCTGGCCTACAAGGCCGAACAA CTGACGGAAGACATGAGCGCAACCCTGCGCTCGCTGGCCTGGGCGCTGCGCTGGGAACAGGCGCGGCTGTTGCAGCAGCT GGAGCAGATTCTCGAACTGAGCGACGCGATACAGGAAGGGCGGGAGGCCAGCTGCATGTTCCGTGGCCAGTCCAGCCCCT TGCACCTGGATTTCACCCTCGCAACGATGAACGCCATTCGCGCCTTCAGCGCGTTGCTGGTAGCCGGGCTGATCTGGATC GAAACCGCGTGGGACGGCGCGCGGGGCGGGATGATTCTGGTGGGGATCCTGTGTTCGTTGATGGCGACGTTTCCGCGCCC ATTGATCGCCGCGCAAAGTTACGCCCGAGGGCTGGGACTGGCCTTGGTGGTGTCGGCCTTCTATCAGTTCATGCTGGTTC CGGCGATCAGTGATTTCGAGATGCTGGCCTTGCTGCTTGCGCCTTTGCTGTATGTGATCGCAGTCGGACTGTCCAGCCCG GCCACCGCCGGTATCGGCATGGGACTGGGGCTGTCGAGTTTCCTGATGCTGGGACCGCAGAACGTCGGCACCGGACAGAA CACCGCCATTCAATGGTTCGAATTTGCCGGCGCCTACGTCAGTGCGGCGATACTGGCTCTGATCGTCTACGCCTGGATCT TCCCGTTCCGCCCGGCCTTTCGAATCAGGCGCTTTTATAACGAGGCGCGGGAGCAGGTCTATCAACTGACAAAAAGCCCG GCTACCGACGAACAGCAATTCGCCTTCGAAAGTCGCATGGTCGATCGCCTGACCTCGATGCTGGGGGTGTTGCCAGCCGC CAATGATCGGGACATGCAGCGTTTGTATGAAATCAGTCTCGCCTGTGTAGCGCTGGGCGTGGCCATGCACCAGCTCAGGC AACAGGCACAGAACAATACTCTGCTCACTGACGCATTCGTTCGGCAGCTGTCGACGGCATTGCGTCAGACCGGTCGTTTT GTCGCCGGCCGACCAGATGTGCGCCTGACACCGTTACTGACTACGCTGCAAGCGCTCGGCGATGATCTGGATGCCTTGCA TGTCGCCACCCATGAGCACTTGTGGTCGGTCTTTCGCATGCGTGTGGCCCTGTTGATCGTGGTGTCGTTTCTGGAACGAC ATGGCGAGCATTTGCAGCCCGACAATTCTGAAGGAGAGCCCGTCCTTGCCCATTGA
Upstream 100 bases:
>100_bases ACAGGCGTTGAATCGACCTACAGCTTGTGTCGACCCTGTTTGCCGTCATGCCCTCCATGCAGTGTCTACGCTTGCAGAAG TTGTTTCGAAGAGGCTACCC
Downstream 100 bases:
>100_bases TTTCGAGATTGGCGGCGTCTACCTGCCTCCCATTGCCCAGGCCCTGTTAATGGCCATACCGGTTTTTCTGGTGCTCGACT GGGGTTTGCGCCGGCTTGGC
Product: fusaric acid resistance protein
Products: NA
Alternate protein names: pHBA efflux pump protein B [H]
Number of amino acids: Translated: 711; Mature: 711
Protein sequence:
>711_residues MQSLLIYFKAVIHPSQAVLLFGLRTIAAGLLTLYLAFLFDLDQPKWSIMAVVIISQPLAGMALARSFGQIIGTTLGAMVA VLLMAIFPQAPLPFITTLALWLALCTAGGTLLRYTSSQAFVLSGYTAVVVALLAIPDQDGTFLLAVTRVTETLLAVACVC VVSLLTARPEAVSRNYFAKVDQVIRLVASHSAAVLRTEESEADFQRRQMQLLGEISALEGLRRHLYFDAPRLRSANNLVL LLGNQLMLLTSRLTALRHQRELLTERWEGDLPLDIQQLRAEELALLDQLAQQGRSLPAEVRHQFVALQQQFEALAYKAEQ LTEDMSATLRSLAWALRWEQARLLQQLEQILELSDAIQEGREASCMFRGQSSPLHLDFTLATMNAIRAFSALLVAGLIWI ETAWDGARGGMILVGILCSLMATFPRPLIAAQSYARGLGLALVVSAFYQFMLVPAISDFEMLALLLAPLLYVIAVGLSSP ATAGIGMGLGLSSFLMLGPQNVGTGQNTAIQWFEFAGAYVSAAILALIVYAWIFPFRPAFRIRRFYNEAREQVYQLTKSP ATDEQQFAFESRMVDRLTSMLGVLPAANDRDMQRLYEISLACVALGVAMHQLRQQAQNNTLLTDAFVRQLSTALRQTGRF VAGRPDVRLTPLLTTLQALGDDLDALHVATHEHLWSVFRMRVALLIVVSFLERHGEHLQPDNSEGEPVLAH
Sequences:
>Translated_711_residues MQSLLIYFKAVIHPSQAVLLFGLRTIAAGLLTLYLAFLFDLDQPKWSIMAVVIISQPLAGMALARSFGQIIGTTLGAMVA VLLMAIFPQAPLPFITTLALWLALCTAGGTLLRYTSSQAFVLSGYTAVVVALLAIPDQDGTFLLAVTRVTETLLAVACVC VVSLLTARPEAVSRNYFAKVDQVIRLVASHSAAVLRTEESEADFQRRQMQLLGEISALEGLRRHLYFDAPRLRSANNLVL LLGNQLMLLTSRLTALRHQRELLTERWEGDLPLDIQQLRAEELALLDQLAQQGRSLPAEVRHQFVALQQQFEALAYKAEQ LTEDMSATLRSLAWALRWEQARLLQQLEQILELSDAIQEGREASCMFRGQSSPLHLDFTLATMNAIRAFSALLVAGLIWI ETAWDGARGGMILVGILCSLMATFPRPLIAAQSYARGLGLALVVSAFYQFMLVPAISDFEMLALLLAPLLYVIAVGLSSP ATAGIGMGLGLSSFLMLGPQNVGTGQNTAIQWFEFAGAYVSAAILALIVYAWIFPFRPAFRIRRFYNEAREQVYQLTKSP ATDEQQFAFESRMVDRLTSMLGVLPAANDRDMQRLYEISLACVALGVAMHQLRQQAQNNTLLTDAFVRQLSTALRQTGRF VAGRPDVRLTPLLTTLQALGDDLDALHVATHEHLWSVFRMRVALLIVVSFLERHGEHLQPDNSEGEPVLAH >Mature_711_residues MQSLLIYFKAVIHPSQAVLLFGLRTIAAGLLTLYLAFLFDLDQPKWSIMAVVIISQPLAGMALARSFGQIIGTTLGAMVA VLLMAIFPQAPLPFITTLALWLALCTAGGTLLRYTSSQAFVLSGYTAVVVALLAIPDQDGTFLLAVTRVTETLLAVACVC VVSLLTARPEAVSRNYFAKVDQVIRLVASHSAAVLRTEESEADFQRRQMQLLGEISALEGLRRHLYFDAPRLRSANNLVL LLGNQLMLLTSRLTALRHQRELLTERWEGDLPLDIQQLRAEELALLDQLAQQGRSLPAEVRHQFVALQQQFEALAYKAEQ LTEDMSATLRSLAWALRWEQARLLQQLEQILELSDAIQEGREASCMFRGQSSPLHLDFTLATMNAIRAFSALLVAGLIWI ETAWDGARGGMILVGILCSLMATFPRPLIAAQSYARGLGLALVVSAFYQFMLVPAISDFEMLALLLAPLLYVIAVGLSSP ATAGIGMGLGLSSFLMLGPQNVGTGQNTAIQWFEFAGAYVSAAILALIVYAWIFPFRPAFRIRRFYNEAREQVYQLTKSP ATDEQQFAFESRMVDRLTSMLGVLPAANDRDMQRLYEISLACVALGVAMHQLRQQAQNNTLLTDAFVRQLSTALRQTGRF VAGRPDVRLTPLLTTLQALGDDLDALHVATHEHLWSVFRMRVALLIVVSFLERHGEHLQPDNSEGEPVLAH
Specific function: Efflux pump whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell [H]
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family [H]
Homologues:
Organism=Escherichia coli, GI1789636, Length=458, Percent_Identity=22.9257641921397, Blast_Score=105, Evalue=9e-24, Organism=Escherichia coli, GI1787933, Length=580, Percent_Identity=23.7931034482759, Blast_Score=87, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 78459; Mature: 78459
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSLLIYFKAVIHPSQAVLLFGLRTIAAGLLTLYLAFLFDLDQPKWSIMAVVIISQPLAG CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEHHHHHCCHHH MALARSFGQIIGTTLGAMVAVLLMAIFPQAPLPFITTLALWLALCTAGGTLLRYTSSQAF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCEE VLSGYTAVVVALLAIPDQDGTFLLAVTRVTETLLAVACVCVVSLLTARPEAVSRNYFAKV EECCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH DQVIRLVASHSAAVLRTEESEADFQRRQMQLLGEISALEGLRRHLYFDAPRLRSANNLVL HHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE LLGNQLMLLTSRLTALRHQRELLTERWEGDLPLDIQQLRAEELALLDQLAQQGRSLPAEV EECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH RHQFVALQQQFEALAYKAEQLTEDMSATLRSLAWALRWEQARLLQQLEQILELSDAIQEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC REASCMFRGQSSPLHLDFTLATMNAIRAFSALLVAGLIWIETAWDGARGGMILVGILCSL CCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH MATFPRPLIAAQSYARGLGLALVVSAFYQFMLVPAISDFEMLALLLAPLLYVIAVGLSSP HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC ATAGIGMGLGLSSFLMLGPQNVGTGQNTAIQWFEFAGAYVSAAILALIVYAWIFPFRPAF CCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH RIRRFYNEAREQVYQLTKSPATDEQQFAFESRMVDRLTSMLGVLPAANDRDMQRLYEISL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH ACVALGVAMHQLRQQAQNNTLLTDAFVRQLSTALRQTGRFVAGRPDVRLTPLLTTLQALG HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHC DDLDALHVATHEHLWSVFRMRVALLIVVSFLERHGEHLQPDNSEGEPVLAH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQSLLIYFKAVIHPSQAVLLFGLRTIAAGLLTLYLAFLFDLDQPKWSIMAVVIISQPLAG CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEHHHHHCCHHH MALARSFGQIIGTTLGAMVAVLLMAIFPQAPLPFITTLALWLALCTAGGTLLRYTSSQAF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCEE VLSGYTAVVVALLAIPDQDGTFLLAVTRVTETLLAVACVCVVSLLTARPEAVSRNYFAKV EECCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH DQVIRLVASHSAAVLRTEESEADFQRRQMQLLGEISALEGLRRHLYFDAPRLRSANNLVL HHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE LLGNQLMLLTSRLTALRHQRELLTERWEGDLPLDIQQLRAEELALLDQLAQQGRSLPAEV EECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH RHQFVALQQQFEALAYKAEQLTEDMSATLRSLAWALRWEQARLLQQLEQILELSDAIQEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC REASCMFRGQSSPLHLDFTLATMNAIRAFSALLVAGLIWIETAWDGARGGMILVGILCSL CCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH MATFPRPLIAAQSYARGLGLALVVSAFYQFMLVPAISDFEMLALLLAPLLYVIAVGLSSP HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC ATAGIGMGLGLSSFLMLGPQNVGTGQNTAIQWFEFAGAYVSAAILALIVYAWIFPFRPAF CCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH RIRRFYNEAREQVYQLTKSPATDEQQFAFESRMVDRLTSMLGVLPAANDRDMQRLYEISL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH ACVALGVAMHQLRQQAQNNTLLTDAFVRQLSTALRQTGRFVAGRPDVRLTPLLTTLQALG HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHC DDLDALHVATHEHLWSVFRMRVALLIVVSFLERHGEHLQPDNSEGEPVLAH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA