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The map label for this gene is ydhJ [H]

Identifier: 77458881

GI number: 77458881

Start: 3045980

End: 3046960

Strand: Direct

Name: ydhJ [H]

Synonym: Pfl01_2656

Alternate gene names: 77458881

Gene position: 3045980-3046960 (Clockwise)

Preceding gene: 77458880

Following gene: 77458885

Centisome position: 47.31

GC content: 60.24

Gene sequence:

>981_bases
TTGAAGACGTTGCTCACTCGATTGACGACATTGGCGGTGGTGCTGCTGGCAATCGTGCTTGGCTGGTTCGCCTGGGAACA
TTACACCCGGGCCCCGTGGACGCGGGATGCGCGGGTGAGGGCGGATGTGGTGACGCTGTCGGCGGATGTTTCGGGTCGCA
TCGTCACGCTCGCCGTGCAGGACAACCAGCATGTCGACAAGGGGCAGTTGCTGCTGGAGATCGACCCGGCTCGCTACAGC
CTGGCCGTCGAGCATGCGAAACGCTCGGTGGAGGTCTCGAAGGCCACGCTTGGGCAGTCACAAGCAGCCATTGTCGCCAG
CGAGGCATTGCTCAAACAACGCCAGAGCGAAGAACGTCGGCGACGAACGCTCAAGCAAGGGTTCGCGATTTCCGGGGAGG
AATGGGAGAAGTCCAGTACCGACGTGGCCGTGGCCCAGGCGGATCTGTTGCGCAATCAGGCGAATCTCGGTCTGGCCGAA
GCCAACGTGCAACTGGCGATTGCTGCATTGACCCAGGCTGAACTGGATCTGCAACGTACCCGAGTCGAAGCGCCGGTCAG
CGGATATGTCACCAATTTGTTGACCCGTCAGGGGGATTACGCGGTGGCCGGCAGTGCCTTGCTGGCGCTGGTGGACAGCA
GCTCCTTTTATGTCAGCGGCTATTTCGAAGAAACCAAGTTGCCAAGAATCGAGGAGGGTGACCGGGTGCGGATCGAATTG
ATGAGCGGGGAAAAATTCGGCGGCACCGTGCAGAGCATCGCCTTCGCCATTGCTGACCGGGAAAACGCGCCGGGCAGTCG
ATTGCTGGCCAACATCAACCCCAGCTACACCTGGGTAAAACTGGCGCAACGAGTACCGGTGCGGATCGGTATCGATCCCG
ATTATTCAGGCAAGGACCGACTGAGAGCCGGCACCACAGCGACAGTTACGGTGCTGGAAAACCCTGAAAGACAGGCGCAA
AAAAGCCCCGCGACCGAATGA

Upstream 100 bases:

>100_bases
CTTGGCGTCCTGCGTTTTGTCTGGCACGAGGCGCTGTTCGAAGGCGCCTTGTACGCCTGTGTATGCGCCGCACTGATTTT
GCTGATGGGAGCCTGAAATC

Downstream 100 bases:

>100_bases
TACGCGGGGCAAAAAATTTGGTTGGTTGCGGCCAACCAAAGGAGCTCTTTAAAAACTGTTACTTGCTGGCGACCGTCTCT
GGCTGCCAGCCACCACCAAG

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MKTLLTRLTTLAVVLLAIVLGWFAWEHYTRAPWTRDARVRADVVTLSADVSGRIVTLAVQDNQHVDKGQLLLEIDPARYS
LAVEHAKRSVEVSKATLGQSQAAIVASEALLKQRQSEERRRRTLKQGFAISGEEWEKSSTDVAVAQADLLRNQANLGLAE
ANVQLAIAALTQAELDLQRTRVEAPVSGYVTNLLTRQGDYAVAGSALLALVDSSSFYVSGYFEETKLPRIEEGDRVRIEL
MSGEKFGGTVQSIAFAIADRENAPGSRLLANINPSYTWVKLAQRVPVRIGIDPDYSGKDRLRAGTTATVTVLENPERQAQ
KSPATE

Sequences:

>Translated_326_residues
MKTLLTRLTTLAVVLLAIVLGWFAWEHYTRAPWTRDARVRADVVTLSADVSGRIVTLAVQDNQHVDKGQLLLEIDPARYS
LAVEHAKRSVEVSKATLGQSQAAIVASEALLKQRQSEERRRRTLKQGFAISGEEWEKSSTDVAVAQADLLRNQANLGLAE
ANVQLAIAALTQAELDLQRTRVEAPVSGYVTNLLTRQGDYAVAGSALLALVDSSSFYVSGYFEETKLPRIEEGDRVRIEL
MSGEKFGGTVQSIAFAIADRENAPGSRLLANINPSYTWVKLAQRVPVRIGIDPDYSGKDRLRAGTTATVTVLENPERQAQ
KSPATE
>Mature_326_residues
MKTLLTRLTTLAVVLLAIVLGWFAWEHYTRAPWTRDARVRADVVTLSADVSGRIVTLAVQDNQHVDKGQLLLEIDPARYS
LAVEHAKRSVEVSKATLGQSQAAIVASEALLKQRQSEERRRRTLKQGFAISGEEWEKSSTDVAVAQADLLRNQANLGLAE
ANVQLAIAALTQAELDLQRTRVEAPVSGYVTNLLTRQGDYAVAGSALLALVDSSSFYVSGYFEETKLPRIEEGDRVRIEL
MSGEKFGGTVQSIAFAIADRENAPGSRLLANINPSYTWVKLAQRVPVRIGIDPDYSGKDRLRAGTTATVTVLENPERQAQ
KSPATE

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=305, Percent_Identity=41.6393442622951, Blast_Score=213, Evalue=1e-56,
Organism=Escherichia coli, GI1789637, Length=322, Percent_Identity=37.888198757764, Blast_Score=178, Evalue=5e-46,
Organism=Escherichia coli, GI1790519, Length=305, Percent_Identity=32.7868852459016, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1788711, Length=341, Percent_Identity=28.7390029325513, Blast_Score=98, Evalue=8e-22,
Organism=Escherichia coli, GI1789041, Length=319, Percent_Identity=27.2727272727273, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI87081796, Length=195, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1790024, Length=278, Percent_Identity=24.1007194244604, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 35712; Mature: 35712

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLLTRLTTLAVVLLAIVLGWFAWEHYTRAPWTRDARVRADVVTLSADVSGRIVTLAVQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEE
DNQHVDKGQLLLEIDPARYSLAVEHAKRSVEVSKATLGQSQAAIVASEALLKQRQSEERR
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RRTLKQGFAISGEEWEKSSTDVAVAQADLLRNQANLGLAEANVQLAIAALTQAELDLQRT
HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCEEEEEEHHHHHHHHHHH
RVEAPVSGYVTNLLTRQGDYAVAGSALLALVDSSSFYVSGYFEETKLPRIEEGDRVRIEL
HHCCCHHHHHHHHHHCCCCCEEHHHEEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEE
MSGEKFGGTVQSIAFAIADRENAPGSRLLANINPSYTWVKLAQRVPVRIGIDPDYSGKDR
ECCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHCCCEEEECCCCCCCCCC
LRAGTTATVTVLENPERQAQKSPATE
CCCCCEEEEEEEECCHHHHHCCCCCC
>Mature Secondary Structure
MKTLLTRLTTLAVVLLAIVLGWFAWEHYTRAPWTRDARVRADVVTLSADVSGRIVTLAVQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEE
DNQHVDKGQLLLEIDPARYSLAVEHAKRSVEVSKATLGQSQAAIVASEALLKQRQSEERR
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RRTLKQGFAISGEEWEKSSTDVAVAQADLLRNQANLGLAEANVQLAIAALTQAELDLQRT
HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCEEEEEEHHHHHHHHHHH
RVEAPVSGYVTNLLTRQGDYAVAGSALLALVDSSSFYVSGYFEETKLPRIEEGDRVRIEL
HHCCCHHHHHHHHHHCCCCCEEHHHEEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEE
MSGEKFGGTVQSIAFAIADRENAPGSRLLANINPSYTWVKLAQRVPVRIGIDPDYSGKDR
ECCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHCCCEEEECCCCCCCCCC
LRAGTTATVTVLENPERQAQKSPATE
CCCCCEEEEEEEECCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]