| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458828
Identifier: 77458828
GI number: 77458828
Start: 2981147
End: 2981575
Strand: Direct
Name: 77458828
Synonym: Pfl01_2603
Alternate gene names: NA
Gene position: 2981147-2981575 (Clockwise)
Preceding gene: 77458827
Following gene: 77458831
Centisome position: 46.3
GC content: 61.77
Gene sequence:
>429_bases ATGAGTGACTCCCGCGCACGTCGCCCGGATCGTGGTCGTTCCGGTGGCAATATCCAGCACTTGAAATTGAAGCTGGCGGT GCTGCTGATCGTCTGCGCGTTGCCGTTGTCCGGCTCGTTTTCGATGTGGCTGCGCGGGATTTCCCTGGTACCGCTGACGG CTTACGGGCTGGTCAGCGTGCTGGCGTTTTTCCTGTACTGGGCGGACAAGCGCAAGGCGCGGGCCGACGCCTGGCGCACA CCGGAAAACATCCTGCACGCGGTGGAACTGGCGGGAGGCTGGCCGGGTGCGTTGATCGCCCAGCAGGTCTTCCGGCACAA GACGCGCAAGGTGTCGTTTCAGGTGCTGTTCTGGATGATCGTGGCGTTGCACCAGGTGTTCTGGATCGATCAGTTGTTCC TTGGTTCGAACCTGCTGGCGCTGTTCTAG
Upstream 100 bases:
>100_bases GCCACAGCTATGCGGCGTTTGCCTGGTACCGGATCGTTTTCGGTCTGGTGATTCTGGCGACCTGGCAGTTCGGCTGGGTC GACTGGACGGCCGCTCAGCC
Downstream 100 bases:
>100_bases AGCAACAGCCCGACCTGCACGCGCTTGGGCAGCTTGCTCACCACCAGTTGATGGGAACGCTGCAGCAAGCCTTGCAATTC CTCGGCGCCCAGCGGGTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSDSRARRPDRGRSGGNIQHLKLKLAVLLIVCALPLSGSFSMWLRGISLVPLTAYGLVSVLAFFLYWADKRKARADAWRT PENILHAVELAGGWPGALIAQQVFRHKTRKVSFQVLFWMIVALHQVFWIDQLFLGSNLLALF
Sequences:
>Translated_142_residues MSDSRARRPDRGRSGGNIQHLKLKLAVLLIVCALPLSGSFSMWLRGISLVPLTAYGLVSVLAFFLYWADKRKARADAWRT PENILHAVELAGGWPGALIAQQVFRHKTRKVSFQVLFWMIVALHQVFWIDQLFLGSNLLALF >Mature_141_residues SDSRARRPDRGRSGGNIQHLKLKLAVLLIVCALPLSGSFSMWLRGISLVPLTAYGLVSVLAFFLYWADKRKARADAWRTP ENILHAVELAGGWPGALIAQQVFRHKTRKVSFQVLFWMIVALHQVFWIDQLFLGSNLLALF
Specific function: Unknown
COG id: COG3326
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16045; Mature: 15914
Theoretical pI: Translated: 11.52; Mature: 11.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSRARRPDRGRSGGNIQHLKLKLAVLLIVCALPLSGSFSMWLRGISLVPLTAYGLVSV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHH LAFFLYWADKRKARADAWRTPENILHAVELAGGWPGALIAQQVFRHKTRKVSFQVLFWMI HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VALHQVFWIDQLFLGSNLLALF HHHHHHHHHHHHHHCCCHHHCC >Mature Secondary Structure SDSRARRPDRGRSGGNIQHLKLKLAVLLIVCALPLSGSFSMWLRGISLVPLTAYGLVSV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHH LAFFLYWADKRKARADAWRTPENILHAVELAGGWPGALIAQQVFRHKTRKVSFQVLFWMI HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VALHQVFWIDQLFLGSNLLALF HHHHHHHHHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA